| Value | Algorithm | Source | Identity | Coverage | Bit score | Evalue | Cross references |
|---|---|---|---|---|---|---|---|
| rimM; 16S rRNA processing protein RimM | similarity |
KEGG
DB: KEGG |
59.0 | 178.0 | 212 | 8.30e-53 | say:TPY_1232 |
| Ribosome maturation factor RimM n=1 Tax=Sphingopyxis alaskensis RB2256 RepID=RIMM_SPHAL (db=UNIREF evalue=1.1e-07 bit_score=62.4 identity=31.5 coverage=76.92307692307693) | similarity |
UNIREF
DB: UNIREF |
31.5 | 76.92 | 62 | 1.10e-07 | say:TPY_1232 |
| 16S_RimM: 16S rRNA processing protein RimM (db=HMMTigr db_id=TIGR02273 from=12 to=176 evalue=9.2e-39 interpro_id=IPR011961 interpro_description=16S rRNA processing protein RimM GO=Cellular Component: ribosome (GO:0005840), Biological Process: rRNA processing (GO:0006364), Molecular Function: ribosome binding (GO:0043022)) | iprscan |
interpro
DB: HMMTigr |
null | null | null | 9.20e-39 | say:TPY_1232 |
| PRC-barrel domain (db=superfamily db_id=SSF50346 from=104 to=176 evalue=9.1e-16 interpro_id=IPR011033 interpro_description=PRC-barrel-like) | iprscan |
interpro
DB: superfamily |
null | null | null | 9.10e-16 | say:TPY_1232 |
| Translation proteins (db=superfamily db_id=SSF50447 from=11 to=98 evalue=2.1e-15 interpro_id=IPR009000 interpro_description=Translation elongation/initiation factor/Ribosomal, beta-barrel) | iprscan |
interpro
DB: superfamily |
null | null | null | 2.10e-15 | say:TPY_1232 |
| (db=HMMPfam db_id=PF01782 from=15 to=94 evalue=3.0e-15 interpro_id=IPR002676 interpro_description=RimM protein GO=Biological Process: rRNA processing (GO:0006364)) | iprscan |
interpro
DB: HMMPfam |
null | null | null | 3.00e-15 | say:TPY_1232 |
| (db=HMMPfam db_id=PF05239 from=101 to=171 evalue=2.0e-06 interpro_id=IPR007903 interpro_description=PRC-barrel) | iprscan |
interpro
DB: HMMPfam |
null | null | null | 2.00e-06 | say:TPY_1232 |
| Ribosome_mat_RimM (db=HAMAP db_id=MF_00014 from=12 to=176 evalue=23.276 interpro_id=IPR011961 interpro_description=16S rRNA processing protein RimM GO=Cellular Component: ribosome (GO:0005840), Biological Process: rRNA processing (GO:0006364), Molecular Function: ribosome binding (GO:0043022)) | iprscan |
interpro
DB: HAMAP |
null | null | null | 2.33e+01 | say:TPY_1232 |
| Ribosome maturation factor RimM {ECO:0000256|HAMAP-Rule:MF_00014, ECO:0000256|SAAS:SAAS00055369}; TaxID=1051632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Inc |
UNIPROT
DB: UniProtKB |
59.0 | 178.0 | 212 | 4.10e-52 | F8I2I9_SULAT |