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AMDSBA3_31_3

Organism: S._acidophilus_IM3

near complete RP 45 / 55 MC: 1 BSCG 50 / 51 ASCG 0 / 38
Location: comp(993..1226)

Top 3 Functional Annotations

Value Algorithm Source
ECF subfamily RNA polymerase sigma-24 factor similarity KEGG
DB: KEGG
  • Identity: 77.6
  • Coverage: 76.0
  • Bit_score: 117
  • Evalue 2.00e-24
Sigma-70 region 4 type 2 n=2 Tax=Sulfobacillus acidophilus RepID=G8TWB7_9FIRM (db=UNIREF evalue=2.2e-24 bit_score=116.7 identity=77.6 coverage=94.87179487179486) similarity UNIREF
DB: UNIREF
  • Identity: 77.6
  • Coverage: 94.87
  • Bit_score: 116
  • Evalue 2.20e-24
HTH_LUXR_1 (db=PatternScan db_id=PS00622 from=25 to=52 evalue=0.0 interpro_id=IPR000792 interpro_description=Transcription regulator LuxR, C-terminal GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sequence-specific DNA binding (GO:0043565)) iprscan interpro
DB: PatternScan
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 0.0

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Taxonomy

Sulfobacillus acidophilus → Sulfobacillus → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 234
ATGCACATAGAAATTCGGGGAATGGAACGGCTTTCGTTTCGCGAACGCCAGGTCGTAGCCCTAAAGGAAACCGGCCAGTCCAGTGAAGCCATCGCCAAGAAACTGGGACTGTCCACCGCAACGGTTGCGACATTGTACAATCGGGCAAAGAACAAGGGATACCAAGTGGTCTTGGTGATTGCAGGCGACCCGTTGGGGGTATTTGGGGATGACGGAGAGGGCGATATAGAATGA
PROTEIN sequence
Length: 78
MHIEIRGMERLSFRERQVVALKETGQSSEAIAKKLGLSTATVATLYNRAKNKGYQVVLVIAGDPLGVFGDDGEGDIE*