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AMDSBA3_31_3 Annotations

Value Algorithm Source Identity Coverage Bit score Evalue Cross references
ECF subfamily RNA polymerase sigma-24 factor similarity KEGG
DB: KEGG
77.6 76.0 117 2.00e-24 say:TPY_0209
Sigma-70 region 4 type 2 n=2 Tax=Sulfobacillus acidophilus RepID=G8TWB7_9FIRM (db=UNIREF evalue=2.2e-24 bit_score=116.7 identity=77.6 coverage=94.87179487179486) similarity UNIREF
DB: UNIREF
77.6 94.87 116 2.20e-24 say:TPY_0209
HTH_LUXR_1 (db=PatternScan db_id=PS00622 from=25 to=52 evalue=0.0 interpro_id=IPR000792 interpro_description=Transcription regulator LuxR, C-terminal GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sequence-specific DNA binding (GO:0043565)) iprscan interpro
DB: PatternScan
null null null 0.0 say:TPY_0209
(db=HMMPfam db_id=PF00196 from=9 to=52 evalue=1.2e-08 interpro_id=IPR000792 interpro_description=Transcription regulator LuxR, C-terminal GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sequence-specific DNA binding (GO:0043565)) iprscan interpro
DB: HMMPfam
null null null 1.20e-08 say:TPY_0209
C-terminal effector domain of the bipartite response regulators (db=superfamily db_id=SSF46894 from=7 to=52 evalue=1.4e-06 interpro_id=IPR016032 interpro_description=Signal transduction response regulator, C-terminal effector GO=Molecular Function: two-component response regulator activity (GO:0000156), Biological Process: two-component signal transduction system (phosphorelay) (GO:0000160), Molecular Function: DNA binding (GO:0003677), Cellular Component: intracellular (GO:0005622), Biological Process: reg iprscan interpro
DB: superfamily
null null null 1.40e-06 say:TPY_0209
HTHLUXR (db=FPrintScan db_id=PR00038 from=11 to=25 evalue=4.7e-05 interpro_id=IPR000792 interpro_description=Transcription regulator LuxR, C-terminal GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sequence-specific DNA binding (GO:0043565)) iprscan interpro
DB: FPrintScan
null null null 4.70e-05 say:TPY_0209
HTHLUXR (db=FPrintScan db_id=PR00038 from=25 to=41 evalue=4.7e-05 interpro_id=IPR000792 interpro_description=Transcription regulator LuxR, C-terminal GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sequence-specific DNA binding (GO:0043565)) iprscan interpro
DB: FPrintScan
null null null 4.70e-05 say:TPY_0209
no description (db=Gene3D db_id=G3DSA:1.10.10.10 from=8 to=52 evalue=0.00052 interpro_id=IPR011991 interpro_description=Winged helix-turn-helix transcription repressor DNA-binding) iprscan interpro
DB: Gene3D
null null null 5.20e-04 say:TPY_0209
ECF subfamily RNA polymerase sigma-24 factor {ECO:0000313|EMBL:AEJ38424.1}; TaxID=1051632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Sulfobaci UNIPROT
DB: UniProtKB
77.6 76.0 117 1.00e-23 F8I4G8_SULAT
ECF subfamily RNA polymerase sigma-24 factor n=2 Tax=Sulfobacillus acidophilus RepID=F8I4G8_SULAT similarity UNIREF
DB: UNIREF90
77.6 null 116 3.00e-24 say:TPY_0209