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AMDSBA3_31_15

Organism: S._acidophilus_IM3

near complete RP 45 / 55 MC: 1 BSCG 50 / 51 ASCG 0 / 38
Location: comp(11271..14831)

Top 3 Functional Annotations

Value Algorithm Source
mfd; transcription-repair coupling factor similarity KEGG
DB: KEGG
  • Identity: 69.5
  • Coverage: 999.99
  • Bit_score: 1624
  • Evalue 0.0
  • rbh
mfd; transcription-repair coupling factor rbh KEGG
DB: KEGG
  • Identity: 69.5
  • Coverage: 999.99
  • Bit_score: 1624
  • Evalue 0.0
  • rbh
Transcription-repair-coupling factor n=5 Tax=Synechocystis sp. PCC 6803 RepID=MFD_SYNY3 (db=UNIREF evalue=1.6e-171 bit_score=609.4 identity=45.3 coverage=56.19208087615838) similarity UNIREF
DB: UNIREF
  • Identity: 45.3
  • Coverage: 56.19
  • Bit_score: 609
  • Evalue 1.60e-171

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Taxonomy

Sulfobacillus acidophilus → Sulfobacillus → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 3561
ATGGCCACCCAAGCACGTGAAACCCAGGTCGACCTCAGTCAATTGGTGACTTTGTGGTCGGGGTACGCACCCTATCAGGAGATTATCGCACGGTTGCGCGAGGGCAAGACCCGCGTCCAAGTCAGTGGGCTGTCGGGGTCCTTGCCATCATACATTGTGGCCGGACTCACGCAAGACGTGCAGCGCCCCGCGTTAGTGGTGACAGCCGGATTTCAAGAGGCGCGGCGGATGGAAGCCGAGTTGCGCTCATTTCGACCCCATGCCTCGGTTTACCTGTTACCGGCGCGGCCCAATTTGGCCGGCGATGTGCGGGCTGAAAGCTATGAGTGGCACGAGCGCCGCATCAAAGCGCTATTTGAAGCCTCTCGTGATCGCGAAGCCGTACTAATTGCACCGGTTGAGGCGGTTCGGCAACGGCTGGCCAGTGCGCCTCACGCGCACATCGCGCTAAAGCCGGGCGATATGGTCGAACCCTCAGTGATTGCCCAGCGACTGCACGAGCTGGGCTATGAACGCCAGCATGAAGTGCAGGAAGAAGGTCAGTTTGCCTGGCGTGGCGCGATTATTGACGTCTATCAGCCCCAGGGACCGGCGGTTCGCCTCGAATGGTTTGACGTCGAAGTGGATTCGATTCGAGTATTTGATGTACAAACGCAACGGACCGTGTCGATGCAATCCGAGGTCGAAATTGGTCCGGCGCGTGAATTGGTGTGGTCCGACGCGTCACGTTTAAGCGCCATTGACCGATTGGCGCGCGAGTCGGCTGATGTCGTGAAGAACCTTGAGGCCTTGGGTAAGCTGGATGAGGCCACACGCGCACGCGAACGTTATGGTCGCTACTTGCATGATCTGGCCGAAGGCCGGAGTTTTCCGGGAATTGAACGCTACAGTGCCGCCTTTTATCCGCCTGAGCCTTTGACGCGCGCCTTTGCGATGCCGCCGCTGGTGATTTATCATGATGTATCCCGGATTGCCGAGGCTTGGCGCGGCCTCGATGCGAGTGAGCGCTTGGAGCATGAACGGCGGTTGGAGCGGGGCGACTTCTTGGCCATGGAACAGGAAATGACCCTGCCTGAAGGGTTGTGGCCGGCCGAGATTAAGGGACATGCCGACGTCTTTTTATCGCTCTTAGCACATAGTCAAGGCACTTACGATGTCACTCTAAATCTCACCGGTCGTCCGGCTCCCCGGGTCCACGCCCAAGCCGAACTCCTAAAATCCGAATTGATGCGCCTACGCAAAGCCCGCATGCGCACCGCTTTGGTGGCTCGGGACCAGGACAGTGCGCGCGTGCTGGTGCATCAGATAATCGACCTCAATTTGTCGGTCCGATCAGGCTTAGGGGTGCCCGGCGAAGTGGGGGTCGTGGTTGGTCAGCTTTCACAAGGATTTGTGCTGGCAGAACTGGGTTTGGCGGTCTTAGCTGAAACCGAGCTGTCCGGGCGTGAGATGCCCTTGCGAGTGCCGCGGCGTGAGCCCCAGGTGCGCCTGCGTCTCACCGATCTTAAGCCCGGAGACTATGTTGTCCATGTCACACACGGGATTGGTCGGTTTGTAGGGATCCAGACCTTGGAGATGCAGGGGCAGCACAAGGATTATTTGCGGGTGCAGTATGCGGGCCAAGATGCACTGTACGTGCCGGTCGATCAATTGTCGTTGGTGCAAAAGTATGTGGGGGTTGAAGGACAAGAACCCAAACTGTCAAAGATGGGGGGGCAGGAATGGCATCGCACCAAGGAGCGGGCCCGTGCTGCGGTGCGCGAAATTGCCGAGGAATTGCTGCGCCTTTACGCGCTAAGAGAATCTCAGCCCGGATTTGCGTTTGGGCCCGACACGCCTTGGCAAGCAGACTTTGAGGCATCCTTTCCCTATGAAGAGACCCCCGATCAATTACGGGCCATCGCGGAGATCAAGGGCGATATGGAGCGGGCGCGGCCGATGGATCGGCTTTTATGCGGCGATGTGGGCTACGGGAAGACCGAAGTGGCTTTGCGGGCAGCGTTCAAAGCCATTATGGGCGGTAAGCAAGTGGCGTTTTTAGTGCCGACCACGCTTTTGGCGGAGCAGCACTTTACGACGAGCAAATCGCGATTGGCCGGCTATCCGGTCAGCGTGGAAGTTTTGAGTCGGTTTCGAACGCCCCGGCAGCAAAAAGATATTTTGGAGCGCTTGCGCCGCGGACAGGTGGACCTCTTGGTGGGTACGCACCGATTGTTGGCGAAGGACGTGGTATTTCAAGATTTGGGCCTATTGATTGTCGACGAGGAACACCGTTTTGGGGTGGCGCACAAAGAACGCATTAAAGCCCTGCGTGCCAACGTCGACGTGCTGACTCTTACCGCGACGCCGATTCCGCGGACATTGCACATGGCCATGGTAGGCATTCGGGACATGAGCGTCATTGAGACACCGCCCGAGGATCGCCTGCCGGTGGAAACGGTGGTGGTCGAATTTGATGAGGCGCTCGTGCGCGATGCCATTCGGCGAGAAATGGAGCGCTCCGGGCAAGTGTTCTACGTGCAAAATCGTATTATGGCCATGGACCGCACGGTCGAGCGGCTGTTGCGCATGTTCCCCGAGTTGCGACTGGGAGTGGTCCACGGTCAAATGCCCGAGAGCCGCATTGAAGATGTCATGGCCCGTTTTATTGACCAAGAGTACGATGTGTTGGTTGCCACGAATATTATTGAGTCGGGACTAGACATTGCCAACGCCAATACCCTCATTGTCGAAGACGCGGATCGGATGGGGCTGGCCCAACTATACCAGTTGCGAGGGCGGGTGGGCCGATCGGCGCGGTTGGCGTATGCCTATTTCACGTTTAAGCCCAACAAAGTGATCACACCGCAGGCCGAAAAGCGGCTGGAGGCGATTCGGGAGTTTACGGAACTGGGTGCCGGTTACCAAATCGCCTTGCGCGATCTTGAAATTCGGGGTGCCGGAAATCTTTTAGGTGCCGAGCAACATGGGTTTATCGCATCCGTAGGATTTGATTTATATACGCAAATGCTCGCGGAAACCATTCGCCAGCTCAAAGGCGCGTCGGTTGCGACGGTGGCCGACCCGACCATTGAAATTGCGGTGGACGCATACCTGCCTGACGCTTACGTTCCTGATGCTCGGCAAAAAATACAAGTGTATAAAGAGTTAGTGTCCGCCAAAACGTTGCGACAGGTTGACGAGTTAGCCGAGGAAATCGAAGATCGATTTGGTCCCGCACCGCCGCCGGTCGTGCGCTTGGAGCAATTGTCGCGAGTGCGGGTCATGGCCCAGCAGTTGAAATTAGTGTCCGTTGCTCAAGGGAAAAACCGGCTCGTGATTCGTGCGTCAACAGAAAGTACCGTTAGTGCCGACACGATCCGGGCGTTGGCCAGCCGATTTCCCGGTCGTCTGGTGCCGGGAAGCAATCGGGCACCAGAAATCGGCGTTAAATTTGCCGGTCAGACTTCTGCGGACGATGTGTTGGATCTGGCTGAAACGGTGTTGCGGGTTATGAAGGGGGGCGAGGAGGCAGCGCCTCACGATTCCGTGGGTGTGGGCGGAAGTGAACGCCTCCTTTAG
PROTEIN sequence
Length: 1187
MATQARETQVDLSQLVTLWSGYAPYQEIIARLREGKTRVQVSGLSGSLPSYIVAGLTQDVQRPALVVTAGFQEARRMEAELRSFRPHASVYLLPARPNLAGDVRAESYEWHERRIKALFEASRDREAVLIAPVEAVRQRLASAPHAHIALKPGDMVEPSVIAQRLHELGYERQHEVQEEGQFAWRGAIIDVYQPQGPAVRLEWFDVEVDSIRVFDVQTQRTVSMQSEVEIGPARELVWSDASRLSAIDRLARESADVVKNLEALGKLDEATRARERYGRYLHDLAEGRSFPGIERYSAAFYPPEPLTRAFAMPPLVIYHDVSRIAEAWRGLDASERLEHERRLERGDFLAMEQEMTLPEGLWPAEIKGHADVFLSLLAHSQGTYDVTLNLTGRPAPRVHAQAELLKSELMRLRKARMRTALVARDQDSARVLVHQIIDLNLSVRSGLGVPGEVGVVVGQLSQGFVLAELGLAVLAETELSGREMPLRVPRREPQVRLRLTDLKPGDYVVHVTHGIGRFVGIQTLEMQGQHKDYLRVQYAGQDALYVPVDQLSLVQKYVGVEGQEPKLSKMGGQEWHRTKERARAAVREIAEELLRLYALRESQPGFAFGPDTPWQADFEASFPYEETPDQLRAIAEIKGDMERARPMDRLLCGDVGYGKTEVALRAAFKAIMGGKQVAFLVPTTLLAEQHFTTSKSRLAGYPVSVEVLSRFRTPRQQKDILERLRRGQVDLLVGTHRLLAKDVVFQDLGLLIVDEEHRFGVAHKERIKALRANVDVLTLTATPIPRTLHMAMVGIRDMSVIETPPEDRLPVETVVVEFDEALVRDAIRREMERSGQVFYVQNRIMAMDRTVERLLRMFPELRLGVVHGQMPESRIEDVMARFIDQEYDVLVATNIIESGLDIANANTLIVEDADRMGLAQLYQLRGRVGRSARLAYAYFTFKPNKVITPQAEKRLEAIREFTELGAGYQIALRDLEIRGAGNLLGAEQHGFIASVGFDLYTQMLAETIRQLKGASVATVADPTIEIAVDAYLPDAYVPDARQKIQVYKELVSAKTLRQVDELAEEIEDRFGPAPPPVVRLEQLSRVRVMAQQLKLVSVAQGKNRLVIRASTESTVSADTIRALASRFPGRLVPGSNRAPEIGVKFAGQTSADDVLDLAETVLRVMKGGEEAAPHDSVGVGGSERLL*