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AMDSBA4_30

Alias: AMDSBA4_C29

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Displaying items 61-69 of 69 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
AMDSBA4_30_61
Pontibacillus chungwhensis, Pontibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(54454..55533)
DNA (1080bp) protein (360aa)
mandelate racemase/muconate lactonizing family protein
Mandelate racemase/muconate lactonizing protein n=1 Tax=Haloterrigena turkmenica DSM 5511 RepID=D2S1J9_HALTV (db=UNIREF evalue=2.0e-24 bit_score=119.0 identity=27.6 coverage=88.05555555555556)
ENOLASE SUPERFAMILY, MANDELATE RACEMASE (db=HMMPanther db_id=PTHR13794 from=81 to=359 evalue=6.7e-79 interpro_id=IPR001354 interpro_description=Mandelate racemase/muconate lactonizing enzyme GO=Molecular Function: catalytic activity (GO:0003824), Biological Process: metabolic process (GO:0008152))
MANDELATE RACEMASE (db=HMMPanther db_id=PTHR13794:SF12 from=81 to=359 evalue=6.7e-79 interpro_id=IPR013370 interpro_description=Muconate/chloromuconate cycloisomerase GO=Molecular Function: muconate cycloisomerase activity (GO:0018849), Molecular Function: chloromuconate cycloisomerase activity (GO:0018850), Molecular Function: manganese ion binding (GO:0030145))
AMDSBA4_30_62
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(55614..56621)
DNA (1008bp) protein (336aa)
cytochrome oxidase assembly
Protoheme IX farnesyltransferase n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C9S5_SPHTD (db=UNIREF evalue=2.0e-18 bit_score=99.0 identity=25.9 coverage=89.88095238095238)
seg (db=Seg db_id=seg from=97 to=110)
transmembrane_regions (db=TMHMM db_id=tmhmm from=288 to=310)
AMDSBA4_30_63
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

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56824..57702
DNA (879bp) protein (293aa)
cation diffusion facilitator family transporter rbh
Cadmium, cobalt and zinc/H(+)-K(+) antiporter n=10 Tax=Bacillus RepID=CZCD_BACA2 (db=UNIREF evalue=1.5e-54 bit_score=218.8 identity=37.8 coverage=98.29351535836177)
seg (db=Seg db_id=seg from=89 to=99)
transmembrane_regions (db=TMHMM db_id=tmhmm from=12 to=34)
AMDSBA4_30_64
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

57927..58502
DNA (576bp) protein (192aa)
Uncharacterized RNA pseudouridine synthase Caur_0901 n=2 Tax=Chloroflexus RepID=Y901_CHLAA (db=UNIREF evalue=2.7e-07 bit_score=61.2 identity=27.5 coverage=72.39583333333334)
Pseudouridine synthase (db=superfamily db_id=SSF55120 from=10 to=104 evalue=1.2e-09 interpro_id=IPR020103 interpro_description=Pseudouridine synthase, catalytic domain GO=Biological Process: pseudouridine synthesis (GO:0001522), Molecular Function: RNA binding (GO:0003723), Biological Process: RNA modification (GO:0009451), Molecular Function: pseudouridine synthase activity (GO:0009982))
RIBOSOMAL PSEUDOURIDINE SYNTHASE (db=HMMPanther db_id=PTHR10436 from=3 to=104 evalue=5.4e-07)
hypothetical protein
AMDSBA4_30_65
unknown

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comp(58773..59147)
DNA (375bp) protein (125aa)
coiled-coil (db=Coil db_id=coil from=94 to=115 evalue=NA)
transmembrane_regions (db=TMHMM db_id=tmhmm from=12 to=34)
transmembrane_regions (db=TMHMM db_id=tmhmm from=49 to=71)
AMDSBA4_30_66
unknown

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comp(59435..59593)
DNA (159bp) protein (53aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=24)
AMDSBA4_30_67
Geobacillus thermoleovorans, Geobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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60079..60546
DNA (468bp) protein (156aa)
ComE operon protein 2
Putative deaminase n=1 Tax=Gordonia phage GTE2 RepID=F8S0U7_9CAUD (db=UNIREF evalue=7.8e-21 bit_score=105.9 identity=33.3 coverage=90.38461538461539)
CYT_DCMP_DEAMINASES (db=PatternScan db_id=PS00903 from=73 to=108 evalue=0.0 interpro_id=IPR016192 interpro_description=APOBEC/CMP deaminase, zinc-binding GO=Molecular Function: zinc ion binding (GO:0008270), Molecular Function: hydrolase activity (GO:0016787))
dCMP deaminase (db=HMMPIR db_id=PIRSF006019 from=1 to=152 evalue=2.9e-53 interpro_id=IPR016473 interpro_description=dCMP deaminase GO=Molecular Function: zinc ion binding (GO:0008270), Molecular Function: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds (GO:0016810))
AMDSBA4_30_68
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(60543..60890)
DNA (348bp) protein (116aa)
DrsE family protein
DrsE family protein n=2 Tax=Sulfobacillus acidophilus RepID=G8TTW1_9FIRM (db=UNIREF evalue=2.4e-43 bit_score=180.3 identity=80.0 coverage=93.96551724137932)
DsrEFH-like (db=superfamily db_id=SSF75169 from=2 to=115 evalue=5.3e-16)
(db=HMMPfam db_id=PF02635 from=12 to=115 evalue=7.9e-13 interpro_id=IPR003787 interpro_description=Sulphur relay, DsrE/F-like protein)
AMDSBA4_30_69
Alicyclobacillus acidoterrestris, Alicyclobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(60954..63002)
DNA (2049bp) protein (683aa)
protease (EC:3.4.21.83) rbh
protease (EC:3.4.21.83) rbh
Oligopeptidase B n=3 Tax=Alicyclobacillus acidocaldarius RepID=C8WUB5_ALIAD (db=UNIREF evalue=1.2e-222 bit_score=778.5 identity=56.3 coverage=99.56076134699853)
Displaying items 61-69 of 69 in total

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