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AMDSBA4_21_23

Organism: S._benefaciens_IM4

near complete RP 45 / 55 MC: 2 BSCG 50 / 51 MC: 2 ASCG 0 / 38
Location: 22867..23205

Top 3 Functional Annotations

Value Algorithm Source
ArsR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 52.9
  • Coverage: 104.0
  • Bit_score: 109
  • Evalue 8.00e-22
Regulatory protein ArsR n=1 Tax=Desulfitobacterium metallireducens DSM 15288 RepID=G6GE70_9FIRM (db=UNIREF evalue=2.4e-11 bit_score=73.9 identity=40.4 coverage=80.53097345132744) similarity UNIREF
DB: UNIREF
  • Identity: 40.4
  • Coverage: 80.53
  • Bit_score: 73
  • Evalue 2.40e-11
no description (db=HMMSmart db_id=SM00418 from=10 to=91 evalue=7.6e-30 interpro_id=IPR001845 interpro_description=HTH ArsR-type DNA-binding domain GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) iprscan interpro
DB: HMMSmart
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 7.60e-30

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Taxonomy

RIFOXYA1_FULL_Alicyclobacillus_53_8_curated → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 339
ATGCAACCGTCGTTTGACACCTGGACCGAAATCTTTAAAGCCCTTGGCGATAAAACACGACTTCATATCCTCGCACTATTGCGACATGATGAGTTTTGCGTGTGCGAGCTGGTCTCTGTATTTAACATGAGCCAGCCTGCAGTATCTCAACACCTTCGCAAATTGAAAGTTGCAGGATTGGTCTCCGAACGGCGTACCGCCCAATGGGTCTTCTATTCGTTGTCTCCCACGTTACCCGACCCTATTCGCATCGTAATCCAAGAGTTGCCGGACGTGGCCGAGGAGATTACGACCCTGAAAAATCAGGGTTTGCGTGTACAGTGTCGCCCGTCACTTTAA
PROTEIN sequence
Length: 113
MQPSFDTWTEIFKALGDKTRLHILALLRHDEFCVCELVSVFNMSQPAVSQHLRKLKVAGLVSERRTAQWVFYSLSPTLPDPIRIVIQELPDVAEEITTLKNQGLRVQCRPSL*