ggKbase home page

AMDSBA4_21_23
Annotations

Value Algorithm Source Identity Coverage Bit score Evalue Cross references
ArsR family transcriptional regulator similarity KEGG
DB: KEGG
52.9 104.0 109 8.00e-22 gmc:GY4MC1_1898
Regulatory protein ArsR n=1 Tax=Desulfitobacterium metallireducens DSM 15288 RepID=G6GE70_9FIRM (db=UNIREF evalue=2.4e-11 bit_score=73.9 identity=40.4 coverage=80.53097345132744) similarity UNIREF
DB: UNIREF
40.4 80.53 73 2.40e-11 gmc:GY4MC1_1898
no description (db=HMMSmart db_id=SM00418 from=10 to=91 evalue=7.6e-30 interpro_id=IPR001845 interpro_description=HTH ArsR-type DNA-binding domain GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) iprscan interpro
DB: HMMSmart
null
null
null
7.60e-30 gmc:GY4MC1_1898
"Winged helix" DNA-binding domain (db=superfamily db_id=SSF46785 from=5 to=82 evalue=1.0e-25) iprscan interpro
DB: superfamily
null
null
null
1.00e-25 gmc:GY4MC1_1898
no description (db=Gene3D db_id=G3DSA:1.10.10.10 from=8 to=98 evalue=3.3e-23 interpro_id=IPR011991 interpro_description=Winged helix-turn-helix transcription repressor DNA-binding) iprscan interpro
DB: Gene3D
null
null
null
3.30e-23 gmc:GY4MC1_1898
HTHARSR (db=FPrintScan db_id=PR00778 from=31 to=42 evalue=3.9e-21 interpro_id=IPR001845 interpro_description=HTH ArsR-type DNA-binding domain GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) iprscan interpro
DB: FPrintScan
null
null
null
3.90e-21 gmc:GY4MC1_1898
HTHARSR (db=FPrintScan db_id=PR00778 from=12 to=27 evalue=3.9e-21 interpro_id=IPR001845 interpro_description=HTH ArsR-type DNA-binding domain GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) iprscan interpro
DB: FPrintScan
null
null
null
3.90e-21 gmc:GY4MC1_1898
HTHARSR (db=FPrintScan db_id=PR00778 from=44 to=59 evalue=3.9e-21 interpro_id=IPR001845 interpro_description=HTH ArsR-type DNA-binding domain GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) iprscan interpro
DB: FPrintScan
null
null
null
3.90e-21 gmc:GY4MC1_1898
HTHARSR (db=FPrintScan db_id=PR00778 from=59 to=74 evalue=3.9e-21 interpro_id=IPR001845 interpro_description=HTH ArsR-type DNA-binding domain GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) iprscan interpro
DB: FPrintScan
null
null
null
3.90e-21 gmc:GY4MC1_1898
(db=HMMPfam db_id=PF01022 from=17 to=62 evalue=1.7e-17 interpro_id=IPR001845 interpro_description=HTH ArsR-type DNA-binding domain GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) iprscan interpro
DB: HMMPfam
null
null
null
1.70e-17 gmc:GY4MC1_1898
HTH_ARSR_2 (db=ProfileScan db_id=PS50987 from=1 to=97 evalue=23.055 interpro_id=IPR001845 interpro_description=HTH ArsR-type DNA-binding domain GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) iprscan interpro
DB: ProfileScan
null
null
null
2.31e+01 gmc:GY4MC1_1898
ArsR family transcriptional regulator Tax=RIFOXYA1_FULL_Alicyclobacillus_53_8_curated UNIPROT
DB: UniProtKB
60.2 108.0 134 8.90e-29 ggdbv1_89182244
Transcriptional regulator n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6J2E4_9BACL similarity UNIREF
DB: UNIREF90
47.7
null
106 4.50e-21 gmc:GY4MC1_1898