name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
AMDSBA5_48_1
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
comp(215..928)
|
transposase IS3/IS911 family protein
ISSd1, transposase OrfB n=2 Tax=Shigella dysenteriae RepID=B3X7H4_SHIDY (db=UNIREF evalue=5.1e-16 bit_score=90.5 identity=54.9 coverage=29.411764705882355)
Ribonuclease H-like (db=superfamily db_id=SSF53098 from=158 to=236 evalue=7.1e-17 interpro_id=IPR012337 interpro_description=Ribonuclease H-like domain GO=Molecular Function: nucleic acid binding (GO:0003676))
(db=HMMPfam db_id=PF00665 from=163 to=236 evalue=1.6e-11 interpro_id=IPR001584 interpro_description=Integrase, catalytic core GO=Biological Process: DNA integration (GO:0015074))
|
|
AMDSBA5_48_2
Leptospira kirschneri, Leptospira, Spirochaetia, Spirochaetes, Bacteria
|
Not on your lists |
comp(1425..1772)
|
1425..1772 - ( gc_cont=0.500)
Uncharacterized protein {ECO:0000313|EMBL:EMK21742.1}; TaxID=1240687 species="Bacteria; Spirochaetes; Leptospirales; Leptospiraceae; Leptospira.;" source="Leptospira kirschneri serovar Bulgarica str.
|
|
AMDSBA5_48_3
Burkholderia cenocepacia, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
1863..3032
|
Type I restriction-modification system,DNA-methyltransferase subunit M (EC:2.1.1.72)
Type I restriction-modification system,DNA-methyltransferase subunit M (EC:2.1.1.72)
Type I restriction-modification system, M subunit n=1 Tax=Ruegeria sp. R11 RepID=B7QXB1_9RHOB (db=UNIREF evalue=6.2e-160 bit_score=569.3 identity=74.6 coverage=97.94871794871794)
|
|
AMDSBA5_48_4
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
3029..4135
|
restriction endonuclease subunit S
Type-1 restriction enzyme EcoR124II specificity protein n=2 Tax=Escherichia coli RepID=T1S1_ECOLX (db=UNIREF evalue=1.4e-41 bit_score=176.0 identity=48.8 coverage=52.84552845528455)
DNA methylase specificity domain (db=superfamily db_id=SSF116734 from=181 to=362 evalue=7.2e-36)
(db=HMMPfam db_id=PF01420 from=188 to=344 evalue=4.3e-31 interpro_id=IPR000055 interpro_description=Restriction endonuclease, type I, HsdS GO=Molecular Function: DNA binding (GO:0003677), Biological Process: DNA modification (GO:0006304))
|
|
AMDSBA5_48_5
Salmonella enterica, Salmonella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
4137..5321
|
prrC; anticodon nuclease
prrC; anticodon nuclease
Anticodon nuclease PrrC n=1 Tax=Vibrio splendidus 12B01 RepID=A3UPJ7_VIBSP (db=UNIREF evalue=2.7e-118 bit_score=431.0 identity=56.4 coverage=91.89873417721519)
|
|
AMDSBA5_48_6
Azotobacter chroococcum, Azotobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
5396..8497
|
hsdR; Type I site-specific deoxyribonuclease, HsdR family
hsdR; Type I site-specific deoxyribonuclease, HsdR family
Type-1 restriction enzyme R protein n=179 Tax=Staphylococcus aureus RepID=HSDR_STAAC (db=UNIREF evalue=3.4e-141 bit_score=508.4 identity=36.4 coverage=89.65183752417795)
seg (db=Seg db_id=seg from=762 to=772)
|
|
AMDSBA5_48_7
unknown
|
Not on your lists |
8954..10528
|
seg (db=Seg db_id=seg from=340 to=357)
|
|
AMDSBA5_48_8
unknown
|
Not on your lists |
10851..11153
|
10851..11153 + ( gc_cont=0.528)
|
|
AMDSBA5_48_9
GWA2_Desulfovibrionales_65_9_curated, Deltaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
11496..12443
|
hypothetical protein
Putative uncharacterized protein n=1 Tax=Serratia odorifera 4Rx13 RepID=D1RZ98_SEROD (db=UNIREF evalue=1.7e-54 bit_score=218.8 identity=41.4 coverage=94.9367088607595)
seg (db=Seg db_id=seg from=287 to=298)
hypothetical protein Tax=GWA2_Desulfovibrionales_65_9_curated
|
|
AMDSBA5_48_10
unknown
|
Not on your lists |
12664..12951
|
12664..12951 + ( gc_cont=0.514)
|
|
AMDSBA5_48_11
unknown
|
Not on your lists |
13568..13732
|
13568..13732 + ( gc_cont=0.430)
|
|
AMDSBA5_48_12
unknown
|
Not on your lists |
comp(13837..14271)
|
transmembrane_regions (db=TMHMM db_id=tmhmm from=13 to=35)
|
|
AMDSBA5_48_13
Sulfobacillus thermotolerans, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
14969..15553
|
resolvase
Resolvase domain-containing protein n=1 Tax=Pseudomonas sp. K-62 RepID=I2FG08_9PSED (db=UNIREF evalue=3.2e-40 bit_score=170.6 identity=49.7 coverage=93.33333333333333)
seg (db=Seg db_id=seg from=125 to=142)
RECOMBINASES_1 (db=PatternScan db_id=PS00397 from=5 to=13 evalue=0.0 interpro_id=IPR006118 interpro_description=Recombinase, conserved site GO=Molecular Function: recombinase activity (GO:0000150), Biological Process: DNA recombination (GO:0006310))
|
|
AMDSBA5_48_14
unknown
|
Not on your lists |
comp(16050..16169)
|
16050..16169 - ( gc_cont=0.458)
|