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AMDSBA5_3_16

Organism: S._thermosulfido._IM5

near complete RP 51 / 55 MC: 14 BSCG 51 / 51 MC: 1 ASCG 0 / 38
Location: 13235..13843

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase ECF-type sigma factor similarity KEGG
DB: KEGG
  • Identity: 34.5
  • Coverage: 206.0
  • Bit_score: 117
  • Evalue 4.10e-24
ECF-family RNA polymerase sigma factor n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9GBY9_SORC5 (db=UNIREF evalue=5.0e-12 bit_score=77.0 identity=27.0 coverage=78.81773399014779) similarity UNIREF
DB: UNIREF
  • Identity: 27.0
  • Coverage: 78.82
  • Bit_score: 77
  • Evalue 5.00e-12
seg (db=Seg db_id=seg from=167 to=184) iprscan interpro
DB: Seg
  • Identity: null
  • Coverage: null
  • Bit_score: null

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Taxonomy

Symbiobacterium thermophilum → Symbiobacterium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 609
GTGCGGGATCAAGACGTACTTCAGCACCTTCGCAATGACGTCCATGGGGAAAACTGGGACGCTCTCATGAGCGATTTATTCGCATACTACAAACCGCGTTTGCTTAGGATGGCCGTGAATATGTTAAATGATGCCGAATTAGCCGAAGATGCTGTATCAGAAATTTGGATCCGCGTTTTGACGCATCTCTCAACATTTCGCCACGACGCCAAATTTAGCACCTGGTTATACCGCATTGCTATGAACACTATTATTGATATGGAGCGGGCAAAAGGCCGGATGATGACCTATGGCCAACCAAATGAGAATCTCCCCTCAACTCAGAGTGAAGATCCTGATAGCCATTGTGAACAATCGTTTAAACAAGAATTGGTACGGTATGCCCTAACCCGTTTATCCCCTATGCAGCGCTCGCTCATCATTATGCGAGATATAGAACACCTGCCCATCAAACAACTCGCAACAATCCTGGCTATCCCTGAAACAGCTGTCAAATCGCGATTACACCGCGCGCGAAAAGCGCTCAAACGTCTCCTCCAACAACGCACGCGCGTTCCCGGACAGGAAAGCGTCGGCACGGTCTCATTGTCCGAGTGGGGAGGGCTGTAG
PROTEIN sequence
Length: 203
VRDQDVLQHLRNDVHGENWDALMSDLFAYYKPRLLRMAVNMLNDAELAEDAVSEIWIRVLTHLSTFRHDAKFSTWLYRIAMNTIIDMERAKGRMMTYGQPNENLPSTQSEDPDSHCEQSFKQELVRYALTRLSPMQRSLIIMRDIEHLPIKQLATILAIPETAVKSRLHRARKALKRLLQQRTRVPGQESVGTVSLSEWGGL*