| Value | Algorithm | Source | Identity | Coverage | Bit score | Evalue | Cross references |
|---|---|---|---|---|---|---|---|
| RNA polymerase ECF-type sigma factor | similarity |
KEGG
DB: KEGG |
34.5 | 206.0 | 117 | 4.10e-24 | sth:STH2962 |
| ECF-family RNA polymerase sigma factor n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9GBY9_SORC5 (db=UNIREF evalue=5.0e-12 bit_score=77.0 identity=27.0 coverage=78.81773399014779) | similarity |
UNIREF
DB: UNIREF |
27.0 | 78.82 | 77 | 5.00e-12 | sth:STH2962 |
| seg (db=Seg db_id=seg from=167 to=184) | iprscan |
interpro
DB: Seg |
null | null | null | null | sth:STH2962 |
| sigma70-ECF: RNA polymerase sigma factor, (db=HMMTigr db_id=TIGR02937 from=21 to=179 evalue=2.8e-38 interpro_id=IPR014284 interpro_description=RNA polymerase sigma-70 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:00169 | iprscan |
interpro
DB: HMMTigr |
null | null | null | 2.80e-38 | sth:STH2962 |
| Sigma2 domain of RNA polymerase sigma factors (db=superfamily db_id=SSF88946 from=11 to=113 evalue=1.7e-20 interpro_id=IPR013325 interpro_description=RNA polymerase sigma factor, region 2 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma fact | iprscan |
interpro
DB: superfamily |
null | null | null | 1.70e-20 | sth:STH2962 |
| no description (db=Gene3D db_id=G3DSA:1.10.1740.10 from=20 to=93 evalue=1.9e-17) | iprscan |
interpro
DB: Gene3D |
null | null | null | 1.90e-17 | sth:STH2962 |
| (db=HMMPfam db_id=PF04542 from=26 to=93 evalue=8.9e-17 interpro_id=IPR007627 interpro_description=RNA polymerase sigma-70 region 2 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987)) | iprscan |
interpro
DB: HMMPfam |
null | null | null | 8.90e-17 | sth:STH2962 |
| (db=HMMPfam db_id=PF08281 from=123 to=175 evalue=6.2e-14 interpro_id=IPR013249 interpro_description=RNA polymerase sigma factor 70, region 4 type 2 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987)) | iprscan |
interpro
DB: HMMPfam |
null | null | null | 6.20e-14 | sth:STH2962 |
| Sigma3 and sigma4 domains of RNA polymerase sigma factors (db=superfamily db_id=SSF88659 from=111 to=181 evalue=9.5e-14 interpro_id=IPR013324 interpro_description=RNA polymerase sigma factor, region 3/4 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Funct | iprscan |
interpro
DB: superfamily |
null | null | null | 9.50e-14 | sth:STH2962 |
| RNA polymerase ECF-type sigma factor n=1 Tax=Symbiobacterium thermophilum (strain T / IAM 14863) RepID=Q67K53_SYMTH | similarity |
UNIREF
DB: UNIREF90 |
34.5 | null | 117 | 5.90e-24 | sth:STH2962 |
| RNA polymerase ECF-type sigma factor {ECO:0000313|EMBL:BAD41945.1}; TaxID=292459 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Symbiobacteriaceae; Symbiobacterium.;" source="Symbiobacteriu |
UNIPROT
DB: UniProtKB |
34.5 | 206.0 | 117 | 2.00e-23 | Q67K53_SYMTH |