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AMDSBA5_21_25

Organism: S._thermosulfido._IM5

near complete RP 51 / 55 MC: 14 BSCG 51 / 51 MC: 1 ASCG 0 / 38
Location: 23956..24393

Top 3 Functional Annotations

Value Algorithm Source
seg (db=Seg db_id=seg from=80 to=87) iprscan interpro
DB: Seg
  • Identity: null
  • Coverage: null
  • Bit_score: null
"Winged helix" DNA-binding domain (db=superfamily db_id=SSF46785 from=4 to=139 evalue=1.6e-26) iprscan interpro
DB: superfamily
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 1.60e-26
no description (db=HMMSmart db_id=SM00347 from=26 to=126 evalue=3.0e-14 interpro_id=IPR000835 interpro_description=Transcription regulator HTH, MarR-type GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) iprscan interpro
DB: HMMSmart
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 3.00e-14

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Taxonomy

Pelosinus fermentans → Pelosinus → Selenomonadales → Negativicutes → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 438
TTGGCCGAACCCGATATTTTAGACGAGCTTGTCATTGAAGTCGAACGGTTCATCCGCACAGGCTGGCGATGGCGTGCTCAGGCATCTTTTTCCTCTCTTAATGGCGCTGAGGTGCGCGTGTTGATGATTGTATCCCGCCATGGTCAGATGAGTGCTTCCGATTTAGCCGATAAGATGGGAGTGGGGCGGCCTGCGACCTCGTCCGTCATTCGGCGGCTGCGCAATCAAGGATATCTTCAGCAACAACAAGATACAGATGATCACCGCCGTCATTTACTGTCCTTAACCCCGAAAGGCGAACAGATGGTGGAAGAATTGCGGGGCATCCGCCGCAAGATTTGGCATGATCATCTCCAAGCGCTGTCCGTCGATGAACAGCGCTTATTACTGCAATTGATTAAAAAGATTTCTGAATCAGCTTTGGCATCCAAGGCATAG
PROTEIN sequence
Length: 146
LAEPDILDELVIEVERFIRTGWRWRAQASFSSLNGAEVRVLMIVSRHGQMSASDLADKMGVGRPATSSVIRRLRNQGYLQQQQDTDDHRRHLLSLTPKGEQMVEELRGIRRKIWHDHLQALSVDEQRLLLQLIKKISESALASKA*