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AMDSBA5_21_25 Annotations

Value Algorithm Source Identity Coverage Bit score Evalue Cross references
seg (db=Seg db_id=seg from=80 to=87) iprscan interpro
DB: Seg
null null null null dku:Desku_3386
"Winged helix" DNA-binding domain (db=superfamily db_id=SSF46785 from=4 to=139 evalue=1.6e-26) iprscan interpro
DB: superfamily
null null null 1.60e-26 dku:Desku_3386
no description (db=HMMSmart db_id=SM00347 from=26 to=126 evalue=3.0e-14 interpro_id=IPR000835 interpro_description=Transcription regulator HTH, MarR-type GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) iprscan interpro
DB: HMMSmart
null null null 3.00e-14 dku:Desku_3386
no description (db=Gene3D db_id=G3DSA:1.10.10.10 from=33 to=106 evalue=1.7e-13 interpro_id=IPR011991 interpro_description=Winged helix-turn-helix transcription repressor DNA-binding) iprscan interpro
DB: Gene3D
null null null 1.70e-13 dku:Desku_3386
(db=HMMPfam db_id=PF01047 from=34 to=90 evalue=5.1e-13 interpro_id=IPR000835 interpro_description=Transcription regulator HTH, MarR-type GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) iprscan interpro
DB: HMMPfam
null null null 5.10e-13 dku:Desku_3386
HTHMARR (db=FPrintScan db_id=PR00598 from=50 to=66 evalue=1.3e-10 interpro_id=IPR000835 interpro_description=Transcription regulator HTH, MarR-type GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) iprscan interpro
DB: FPrintScan
null null null 1.30e-10 dku:Desku_3386
HTHMARR (db=FPrintScan db_id=PR00598 from=116 to=136 evalue=1.3e-10 interpro_id=IPR000835 interpro_description=Transcription regulator HTH, MarR-type GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) iprscan interpro
DB: FPrintScan
null null null 1.30e-10 dku:Desku_3386
HTHMARR (db=FPrintScan db_id=PR00598 from=67 to=82 evalue=1.3e-10 interpro_id=IPR000835 interpro_description=Transcription regulator HTH, MarR-type GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) iprscan interpro
DB: FPrintScan
null null null 1.30e-10 dku:Desku_3386
HTHMARR (db=FPrintScan db_id=PR00598 from=86 to=102 evalue=1.3e-10 interpro_id=IPR000835 interpro_description=Transcription regulator HTH, MarR-type GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) iprscan interpro
DB: FPrintScan
null null null 1.30e-10 dku:Desku_3386
no description (db=HMMSmart db_id=SM00418 from=28 to=108 evalue=0.0036 interpro_id=IPR001845 interpro_description=HTH ArsR-type DNA-binding domain GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) iprscan interpro
DB: HMMSmart
null null null 3.60e-03 dku:Desku_3386
HTH_MARR_2 (db=ProfileScan db_id=PS50995 from=4 to=138 evalue=24.698 interpro_id=IPR000835 interpro_description=Transcription regulator HTH, MarR-type GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) iprscan interpro
DB: ProfileScan
null null null 2.47e+01 dku:Desku_3386
Regulatory protein MarR n=6 Tax=Pelosinus fermentans RepID=I8R9N3_9FIRM similarity UNIREF
DB: UNIREF90
31.2 null 71 2.70e-10 dku:Desku_3386
Regulatory protein MarR {ECO:0000313|EMBL:EIW15498.1}; TaxID=1149862 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Pelosinus.;" source="Pelosinus fermentans B4.;" UNIPROT
DB: UniProtKB
31.2 138.0 71 9.10e-10 I8R9N3_9FIRM
MarR family transcriptional regulator KEGG
DB: KEGG
31.1 135.0 70 4.10e-10 dku:Desku_3386