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AMDSBA5_25_43

Organism: S._thermosulfido._IM5

near complete RP 51 / 55 MC: 14 BSCG 51 / 51 MC: 1 ASCG 0 / 38
Location: comp(42762..43304)

Top 3 Functional Annotations

Value Algorithm Source
seg (db=Seg db_id=seg from=158 to=170) iprscan interpro
DB: Seg
  • Identity: null
  • Coverage: null
  • Bit_score: null
coiled-coil (db=Coil db_id=coil from=159 to=180 evalue=NA) iprscan interpro
DB: Coil
  • Identity: null
  • Coverage: null
  • Bit_score: null
sigma70-ECF: RNA polymerase sigma factor, (db=HMMTigr db_id=TIGR02937 from=19 to=173 evalue=4.1e-30 interpro_id=IPR014284 interpro_description=RNA polymerase sigma-70 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:00169 iprscan interpro
DB: HMMTigr
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 4.10e-30

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Taxonomy

BJP_IG2157_Anaerolineales_55_23 → Anaerolineales → Anaerolineae → Chloroflexi → Bacteria

Sequences

DNA sequence
Length: 543
GTGATTTTCGCGAAAGCTGTAAACAAGTTATCCGTTGCGCATCCCGCCAGCGAAGAAGAACTGGTGGAATTTGTTGAGCAGATTGCACCTAAACTTTTCCGTTTTGCCTGGGCGACGATTCGCGATTACTCCTTGGCCGAAGACATCGTTCAGGAGTGTTTAGCCCGTTATGTGGTATACCGGGACAAACACCATGGGAAATCGCCGCCTTTGCGTTGGTTCTTTACGGTGGTAGCCCATTTATGCATGGATGTATTTCGTCAAAAGCGGCAAGAGGTGCAATTATTTGACCAGCTCAGCCTCTCGAAATCCGGTCATGCCGAAATTTCCGACGATAATCAGGAATTATCGGTTTTGTGGGATGCCATCGCCCAATTGAAACCCAAAGACCGGATGGCCATTGTTTTAGTGTATTATCATGACTTACCGTTAAAAGAAGCCGCCGCCATTTTAGGAACGACTCCAACCTTTTTAAAAACAAAATTGGCACGGTTACGCAAACGGCTACGAAATGAGGTGGCAGAACATGACGAGAAAATCTGA
PROTEIN sequence
Length: 181
VIFAKAVNKLSVAHPASEEELVEFVEQIAPKLFRFAWATIRDYSLAEDIVQECLARYVVYRDKHHGKSPPLRWFFTVVAHLCMDVFRQKRQEVQLFDQLSLSKSGHAEISDDNQELSVLWDAIAQLKPKDRMAIVLVYYHDLPLKEAAAILGTTPTFLKTKLARLRKRLRNEVAEHDEKI*