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AMDSBA5_25_43 Annotations

Value Algorithm Source Identity Coverage Bit score Evalue Cross references
seg (db=Seg db_id=seg from=158 to=170) iprscan interpro
DB: Seg
null null null null hoh:Hoch_4892
coiled-coil (db=Coil db_id=coil from=159 to=180 evalue=NA) iprscan interpro
DB: Coil
null null null null hoh:Hoch_4892
sigma70-ECF: RNA polymerase sigma factor, (db=HMMTigr db_id=TIGR02937 from=19 to=173 evalue=4.1e-30 interpro_id=IPR014284 interpro_description=RNA polymerase sigma-70 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:00169 iprscan interpro
DB: HMMTigr
null null null 4.10e-30 hoh:Hoch_4892
Sigma2 domain of RNA polymerase sigma factors (db=superfamily db_id=SSF88946 from=13 to=87 evalue=2.0e-16 interpro_id=IPR013325 interpro_description=RNA polymerase sigma factor, region 2 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma facto iprscan interpro
DB: superfamily
null null null 2.00e-16 hoh:Hoch_4892
no description (db=Gene3D db_id=G3DSA:1.10.1740.10 from=8 to=94 evalue=1.2e-12) iprscan interpro
DB: Gene3D
null null null 1.20e-12 hoh:Hoch_4892
Sigma3 and sigma4 domains of RNA polymerase sigma factors (db=superfamily db_id=SSF88659 from=105 to=175 evalue=6.3e-12 interpro_id=IPR013324 interpro_description=RNA polymerase sigma factor, region 3/4 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Funct iprscan interpro
DB: superfamily
null null null 6.30e-12 hoh:Hoch_4892
(db=HMMPfam db_id=PF08281 from=119 to=169 evalue=3.0e-11 interpro_id=IPR013249 interpro_description=RNA polymerase sigma factor 70, region 4 type 2 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987)) iprscan interpro
DB: HMMPfam
null null null 3.00e-11 hoh:Hoch_4892
(db=HMMPfam db_id=PF04542 from=24 to=90 evalue=1.8e-07 interpro_id=IPR007627 interpro_description=RNA polymerase sigma-70 region 2 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987)) iprscan interpro
DB: HMMPfam
null null null 1.80e-07 hoh:Hoch_4892
ECF subfamily RNA polymerase sigma-24 subunit KEGG
DB: KEGG
33.9 174.0 82 1.70e-13 hoh:Hoch_4892
Tax=BJP_IG2157_Anaerolineales_55_23 UNIPROT
DB: UniProtKB
26.8 183.0 82 4.90e-13 ggdbv1_107376344
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LU17_HALO1 similarity UNIREF
DB: UNIREF90
33.9 null 81 2.50e-13 hoh:Hoch_4892