| Value | Algorithm | Source | Identity | Coverage | Bit score | Evalue | Cross references |
|---|---|---|---|---|---|---|---|
| seg (db=Seg db_id=seg from=158 to=170) | iprscan |
interpro
DB: Seg |
null | null | null | null | hoh:Hoch_4892 |
| coiled-coil (db=Coil db_id=coil from=159 to=180 evalue=NA) | iprscan |
interpro
DB: Coil |
null | null | null | null | hoh:Hoch_4892 |
| sigma70-ECF: RNA polymerase sigma factor, (db=HMMTigr db_id=TIGR02937 from=19 to=173 evalue=4.1e-30 interpro_id=IPR014284 interpro_description=RNA polymerase sigma-70 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:00169 | iprscan |
interpro
DB: HMMTigr |
null | null | null | 4.10e-30 | hoh:Hoch_4892 |
| Sigma2 domain of RNA polymerase sigma factors (db=superfamily db_id=SSF88946 from=13 to=87 evalue=2.0e-16 interpro_id=IPR013325 interpro_description=RNA polymerase sigma factor, region 2 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma facto | iprscan |
interpro
DB: superfamily |
null | null | null | 2.00e-16 | hoh:Hoch_4892 |
| no description (db=Gene3D db_id=G3DSA:1.10.1740.10 from=8 to=94 evalue=1.2e-12) | iprscan |
interpro
DB: Gene3D |
null | null | null | 1.20e-12 | hoh:Hoch_4892 |
| Sigma3 and sigma4 domains of RNA polymerase sigma factors (db=superfamily db_id=SSF88659 from=105 to=175 evalue=6.3e-12 interpro_id=IPR013324 interpro_description=RNA polymerase sigma factor, region 3/4 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Funct | iprscan |
interpro
DB: superfamily |
null | null | null | 6.30e-12 | hoh:Hoch_4892 |
| (db=HMMPfam db_id=PF08281 from=119 to=169 evalue=3.0e-11 interpro_id=IPR013249 interpro_description=RNA polymerase sigma factor 70, region 4 type 2 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987)) | iprscan |
interpro
DB: HMMPfam |
null | null | null | 3.00e-11 | hoh:Hoch_4892 |
| (db=HMMPfam db_id=PF04542 from=24 to=90 evalue=1.8e-07 interpro_id=IPR007627 interpro_description=RNA polymerase sigma-70 region 2 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987)) | iprscan |
interpro
DB: HMMPfam |
null | null | null | 1.80e-07 | hoh:Hoch_4892 |
| ECF subfamily RNA polymerase sigma-24 subunit |
KEGG
DB: KEGG |
33.9 | 174.0 | 82 | 1.70e-13 | hoh:Hoch_4892 | |
| Tax=BJP_IG2157_Anaerolineales_55_23 |
UNIPROT
DB: UniProtKB |
26.8 | 183.0 | 82 | 4.90e-13 | ggdbv1_107376344 | |
| RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LU17_HALO1 | similarity |
UNIREF
DB: UNIREF90 |
33.9 | null | 81 | 2.50e-13 | hoh:Hoch_4892 |