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AMDSBAU_40

Alias: SULFO_OTHER_40

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Displaying 21 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
AMDSBAU_40_1
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3..1541)
DNA (1539bp) protein (513aa)
copA; copper-translocating P-type ATPase
Copper-translocating P-type ATPase {ECO:0000313|EMBL:AEJ41763.1}; TaxID=1051632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Sulfobacillus.;" so
Copper-translocating P-type ATPase n=2 Tax=Sulfobacillus acidophilus RepID=F8IBQ8_SULAT (db=UNIREF evalue=1.0e-169 bit_score=602.4 identity=61.8 coverage=93.95711500974659)
transmembrane_regions (db=TMHMM db_id=tmhmm from=248 to=267)
AMDSBAU_40_2
CG_Deferri_01, Deferribacterales, Deferribacteres, Deferribacteres, Bacteria

Not on your lists

comp(1663..1827)
DNA (165bp) protein (55aa)
copper-translocating P-type ATPase Tax=CG_Deferri_01
(db=HMMPfam db_id=PF04945 from=6 to=45 evalue=3.0e-13 interpro_id=IPR007029 interpro_description=YHS)
no description (db=HMMSmart db_id=SM00746 from=4 to=41 evalue=9.5e-06 interpro_id=IPR011017 interpro_description=TRASH)
Ferritin-like (db=superfamily db_id=SSF47240 from=5 to=52 evalue=9.8e-08 interpro_id=IPR009078 interpro_description=Ferritin/ribonucleotide reductase-like GO=Molecular Function: oxidoreductase activity (GO:0016491), Molecular Function: transition metal ion binding (GO:0046914), Biological Process: oxidation-reduction process (GO:0055114))
AMDSBAU_40_3
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2181..2579)
DNA (399bp) protein (133aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEJ41764.1}; TaxID=1051632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Sulfobacillus.;" source="Sulfo
Uncharacterized protein n=2 Tax=Sulfobacillus acidophilus RepID=F8IBQ9_SULAT
(db=HMMPfam db_id=PF02583 from=6 to=85 evalue=1.3e-20 interpro_id=IPR003735 interpro_description=Protein of unknown function DUF156)
AMDSBAU_40_4
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2678..3820)
DNA (1143bp) protein (381aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEJ40019.1}; TaxID=1051632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Sulfobacillus.;" source="Sulfo
Uncharacterized protein n=2 Tax=Sulfobacillus acidophilus RepID=F8I7V6_SULAT
seg (db=Seg db_id=seg from=210 to=232)
AMDSBAU_40_5
unknown

Not on your lists

comp(4006..4203)
DNA (198bp) protein (66aa)
4006..4203 - ( gc_cont=0.591)
AMDSBAU_40_6
unknown

Not on your lists

comp(4277..4552)
DNA (276bp) protein (92aa)
4277..4552 - ( gc_cont=0.612)
AMDSBAU_40_7
Bacillus cereus, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(4987..6546)
DNA (1560bp) protein (520aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAS39122.1}; TaxID=222523 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus cereus group.;" source="Bacillus cereus (strain
Uncharacterized protein n=1 Tax=Bacillus cereus (strain ATCC 10987) RepID=Q73F21_BACC1
seg (db=Seg db_id=seg from=485 to=499)
AMDSBAU_40_8
Nostoc punctiforme, Nostoc, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(6533..8347)
DNA (1815bp) protein (605aa)
Tn7-like transposition protein D
Tn7-like transposition protein D {ECO:0000313|EMBL:ACC83655.1}; TaxID=63737 species="Bacteria; Cyanobacteria; Nostocales; Nostocaceae; Nostoc.;" source="Nostoc punctiforme (strain ATCC 29133 / PCC 731
Tn7-like transposition protein D n=1 Tax=Nostoc punctiforme PCC 73102 RepID=B2J4G5_NOSP7 (db=UNIREF evalue=2.1e-97 bit_score=362.5 identity=35.2 coverage=97.19008264462809)
coiled-coil (db=Coil db_id=coil from=197 to=218 evalue=NA)
AMDSBAU_40_9
Crinalium epipsammum, Crinalium, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(8419..10095)
DNA (1677bp) protein (559aa)
Tn7-like transposition protein C
Tn7-like transposition protein C
Tn7-like transposition protein C n=1 Tax=Crinalium epipsammum PCC 9333 RepID=K9VUI2_9CYAN
Tn7-like transposition protein C {ECO:0000313|EMBL:AFZ11596.1}; TaxID=1173022 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Crinalium.;" source="Crinalium epipsammum PCC 93
AMDSBAU_40_10
Geminocystis sp. NIES-3708, Geminocystis, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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comp(10092..12254)
DNA (2163bp) protein (721aa)
Transposase and inactivated derivatives {ECO:0000313|EMBL:BAQ60814.1}; TaxID=1615909 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Geminocystis.;" source="Geminocystis sp. NI
integrase catalytic subunit
integrase catalytic subunit
Integrase catalytic region n=1 Tax=Crinalium epipsammum PCC 9333 RepID=K9VVU0_9CYAN
AMDSBAU_40_11
Geminocystis sp. NIES-3708, Geminocystis, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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comp(12251..13159)
DNA (909bp) protein (303aa)
Tn7-like transposition protein A {ECO:0000313|EMBL:BAQ60815.1}; TaxID=1615909 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Geminocystis.;" source="Geminocystis sp. NIES-3708
TnsA endonuclease C terminal family protein n=1 Tax=Brevibacillus laterosporus GI-9 RepID=H0UHF3_BRELA (db=UNIREF evalue=5.5e-67 bit_score=260.4 identity=50.2 coverage=85.14851485148515)
TnsA endonuclease
seg (db=Seg db_id=seg from=39 to=51)
AMDSBAU_40_12
Sulfobacillus thermotolerans, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13550..13897)
DNA (348bp) protein (116aa)
Putative bacteriophage-related protein {ECO:0000313|EMBL:AEP14300.1}; TaxID=338644 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Sulfobacillus.;"
Putative bacteriophage-related protein n=2 Tax=Sulfobacillus thermotolerans RepID=G5CJ23_9FIRM (db=UNIREF evalue=2.4e-18 bit_score=97.4 identity=54.0 coverage=74.13793103448276)
hypothetical protein
N-(deoxy)ribosyltransferase-like (db=superfamily db_id=SSF52309 from=3 to=100 evalue=7.1e-15)
AMDSBAU_40_13
Syntrophomonas wolfei, Syntrophomonas, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13990..14994)
DNA (1005bp) protein (335aa)
sigma 38 (RpoS)
RNA polymerase sigma factor SigA {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=335541 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Syntrophomonadaceae; Syntrophomonas.;" source="Syntrophomonas
RNA polymerase sigma factor n=1 Tax=Syntrophomonas wolfei subsp. wolfei str. Goettingen RepID=Q0AWU4_SYNWW (db=UNIREF evalue=2.1e-67 bit_score=261.9 identity=46.7 coverage=90.74626865671642)
(db=HMMPfam db_id=PF00140 from=58 to=93 evalue=1.0e-08 interpro_id=IPR009042 interpro_description=RNA polymerase sigma-70 region 1.2 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987))
AMDSBAU_40_14
unknown

Not on your lists

comp(15033..15248)
DNA (216bp) protein (72aa)
seg (db=Seg db_id=seg from=50 to=63)
AMDSBAU_40_15
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

comp(15711..16421)
DNA (711bp) protein (237aa)
HNH nuclease Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
SphI restriction endonuclease n=1 Tax=uncultured candidate division OP1 bacterium RepID=H5STZ8_9BACT (db=UNIREF evalue=2.1e-53 bit_score=214.9 identity=46.1 coverage=93.67088607594937)
HNH nuclease
AMDSBAU_40_16
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

comp(16510..17397)
DNA (888bp) protein (296aa)
DNA adenine methylase Dam Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
D12 class N6 adenine-specific DNA methyltransferase n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BT77_9GAMM
D12 class N6 adenine-specific DNA methyltransferase n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BT77_9GAMM (db=UNIREF evalue=2.7e-79 bit_score=301.2 identity=53.0 coverage=95.27027027027027)
DNA adenine methylase Dam
AMDSBAU_40_17

Not on your lists

comp(17847..18227)
DNA (381bp) protein (127aa)
Uncharacterized protein {ECO:0000313|EMBL:KKN68033.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Putative uncharacterized protein n=1 Tax=Gordonia otitidis NBRC 100426 RepID=H5TSL1_9ACTO (db=UNIREF evalue=3.7e-17 bit_score=93.6 identity=47.0 coverage=85.8267716535433)
hypothetical protein
seg (db=Seg db_id=seg from=45 to=61)
AMDSBAU_40_18
unknown

Not on your lists

comp(18267..18509)
DNA (243bp) protein (81aa)
coiled-coil (db=Coil db_id=coil from=3 to=24 evalue=NA)
AMDSBAU_40_19
Bacillus phage Grass, Caudovirales, Viruses

Not on your lists

comp(18506..19405)
DNA (900bp) protein (300aa)
Uncharacterized protein {ECO:0000313|EMBL:AGY47484.1}; TaxID=1406785 species="Viruses; dsDNA viruses, no RNA stage; Caudovirales.;" source="Bacillus phage Grass.;"
18506..19405 - ( gc_cont=0.531)
AMDSBAU_40_20
unknown

Not on your lists

comp(19439..19819)
DNA (381bp) protein (127aa)
19439..19819 - ( gc_cont=0.570)
AMDSBAU_40_21
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19951..20301)
DNA (351bp) protein (117aa)
ribonucleoside-diphosphate reductase class II (EC:1.17.4.-)
Ribonucleoside-diphosphate reductase {ECO:0000313|EMBL:AEJ39985.1}; TaxID=1051632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Sulfobacillus.;"
Ribonucleoside-diphosphate reductase n=2 Tax=Sulfobacillus acidophilus RepID=F8I7B4_SULAT (db=UNIREF evalue=4.6e-38 bit_score=162.9 identity=70.9 coverage=98.29059829059828)
Displaying 21 items

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