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AMDSBAU_55

Alias: SULFO_OTHER_55

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs functional annotations notes
AMDSBAU_55_1
unknown

Not on your lists

44..271
-----------------
DNA (228bp)
protein (76aa)
44..271 + ( gc_cont=0.658)
AMDSBAU_55_2
unknown

Not on your lists

351..773
-----------------
DNA (423bp)
protein (141aa)
351..773 + ( gc_cont=0.617)
AMDSBAU_55_3
unknown

Not on your lists

907..1773
-----------------
DNA (867bp)
protein (289aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=9 to=43)
transmembrane_regions (db=TMHMM db_id=tmhmm from=53 to=75)
seg (db=Seg db_id=seg from=9 to=22)
AMDSBAU_55_4
unknown

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1730..1915
-----------------
DNA (186bp)
protein (62aa)
1730..1915 + ( gc_cont=0.618)
AMDSBAU_55_5
unknown

Not on your lists

1939..2544
-----------------
DNA (606bp)
protein (202aa)
(db=HMMPfam db_id=PF05866 from=95 to=190 evalue=3.6e-06 interpro_id=IPR008822 interpro_description=Endodeoxyribonuclease, RusA-like GO=Molecular Function: magnesium ion binding (GO:0000287), Biological Process: DNA repair (GO:0006281), Biological Process: DNA recombination (GO:0006310))
Holliday junction resolvase RusA (db=superfamily db_id=SSF103084 from=74 to=194 evalue=3.2e-08 interpro_id=IPR008822 interpro_description=Endodeoxyribonuclease, RusA-like GO=Molecular Function: magnesium ion binding (GO:0000287), Biological Process: DNA repair (GO:0006281), Biological Process: DNA recombination (GO:0006310))
AMDSBAU_55_6

Not on your lists

comp(2740..3615)
-----------------
DNA (876bp)
protein (292aa)
Integrase core domain protein n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7RYX7_9GAMM (db=UNIREF evalue=2.1e-31 bit_score=142.1 identity=32.3 coverage=93.15068493150685)
Fis family transcriptional regulator (EC:2.7.7.49)
(db=HMMPfam db_id=PF00665 from=122 to=239 evalue=1.7e-24 interpro_id=IPR001584 interpro_description=Integrase, catalytic core GO=Biological Process: DNA integration (GO:0015074))
Ribonuclease H-like (db=superfamily db_id=SSF53098 from=118 to=288 evalue=2.5e-29 interpro_id=IPR012337 interpro_description=Ribonuclease H-like domain GO=Molecular Function: nucleic acid binding (GO:0003676))
AMDSBAU_55_7
GWA2_RIF03_38_11_curated, RIF3, Bacteria

Not on your lists

comp(3612..3911)
-----------------
DNA (300bp)
protein (100aa)
Transposase
Transposase IS3/IS911 family protein n=9 Tax=Spirochaeta thermophila (strain ATCC 700085 / DSM 6578 / Z-1203) RepID=G0GAB8_SPITZ
coiled-coil (db=Coil db_id=coil from=62 to=83 evalue=NA)
(db=HMMPfam db_id=PF01527 from=4 to=77 evalue=1.4e-07 interpro_id=IPR002514 interpro_description=Transposase IS3/IS911family GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: transposase activity (GO:0004803), Biological Process: transposition, DNA-mediated (GO:0006313))
AMDSBAU_55_8
unknown

Not on your lists

4132..4584
-----------------
DNA (453bp)
protein (151aa)
4132..4584 + ( gc_cont=0.558)
AMDSBAU_55_9
unknown

Not on your lists

4914..5426
-----------------
DNA (513bp)
protein (171aa)
seg (db=Seg db_id=seg from=64 to=74)
AMDSBAU_55_10
unknown

Not on your lists

5574..5846
-----------------
DNA (273bp)
protein (91aa)
seg (db=Seg db_id=seg from=46 to=55)
AMDSBAU_55_11
unknown

Not on your lists

5941..6171
-----------------
DNA (231bp)
protein (77aa)
5941..6171 + ( gc_cont=0.511)
AMDSBAU_55_12
unknown

Not on your lists

6563..6796
-----------------
DNA (234bp)
protein (78aa)
seg (db=Seg db_id=seg from=9 to=13)
AMDSBAU_55_13
unknown

Not on your lists

comp(6854..7090)
-----------------
DNA (237bp)
protein (79aa)
6854..7090 - ( gc_cont=0.620)
AMDSBAU_55_14
unknown

Not on your lists

8687..9022
-----------------
DNA (336bp)
protein (112aa)
seg (db=Seg db_id=seg from=9 to=18)
AMDSBAU_55_15
unknown

Not on your lists

9078..9386
-----------------
DNA (309bp)
protein (103aa)
9078..9386 + ( gc_cont=0.576)
AMDSBAU_55_16
unknown

Not on your lists

9551..10024
-----------------
DNA (474bp)
protein (158aa)
9551..10024 + ( gc_cont=0.580)
AMDSBAU_55_17
unknown

Not on your lists

10125..10877
-----------------
DNA (753bp)
protein (251aa)
seg (db=Seg db_id=seg from=90 to=106)
AMDSBAU_55_18
unknown

Not on your lists

10871..11491
-----------------
DNA (621bp)
protein (207aa)
10871..11491 + ( gc_cont=0.596)
AMDSBAU_55_19
unknown

Not on your lists

11505..11825
-----------------
DNA (321bp)
protein (107aa)
11505..11825 + ( gc_cont=0.533)
AMDSBAU_55_20
unknown

Not on your lists

comp(11813..12097)
-----------------
DNA (285bp)
protein (95aa)
11813..12097 - ( gc_cont=0.572)
AMDSBAU_55_21
Sporomusa ovata, Sporomusa, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

12282..13418
-----------------
DNA (1137bp)
protein (379aa)
ATPase
ATPase associated with various cellular activities AAA_5 n=1 Tax=Ferroglobus placidus DSM 10642 RepID=D3S354_FERPA (db=UNIREF evalue=1.3e-73 bit_score=282.7 identity=39.5 coverage=92.0844327176781)
coiled-coil (db=Coil db_id=coil from=328 to=349 evalue=NA)
seg (db=Seg db_id=seg from=194 to=216)
AMDSBAU_55_22
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15099..16820
-----------------
DNA (1722bp)
protein (574aa)
hypothetical protein
Uncharacterized protein n=2 Tax=Sulfobacillus acidophilus RepID=F8I9F1_SULAT
seg (db=Seg db_id=seg from=246 to=258)
AMDSBAU_55_23
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16888..17463
-----------------
DNA (576bp)
protein (192aa)
hypothetical protein
Uncharacterized protein n=2 Tax=Sulfobacillus acidophilus RepID=F8I9F2_SULAT
Displaying 23 items

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