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AMDSBAU_11_13

Organism: Sulfo_Unknown_Bin

partial RP 4 / 55 MC: 1 BSCG 5 / 51 ASCG 0 / 38
Location: comp(16112..16633)

Top 3 Functional Annotations

Value Algorithm Source
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 67.9
  • Coverage: 159.0
  • Bit_score: 213
  • Evalue 3.60e-53
RNA polymerase, sigma-24 subunit, ECF subfamily n=2 Tax=Sulfobacillus acidophilus RepID=F8I392_SULAT (db=UNIREF evalue=4.4e-53 bit_score=213.4 identity=67.9 coverage=90.80459770114942) similarity UNIREF
DB: UNIREF
  • Identity: 67.0
  • Coverage: 90.0
  • Bit_score: 213
  • Evalue 4.00e+00
no description (db=Gene3D db_id=G3DSA:1.10.10.10 from=95 to=157 evalue=0.00012 interpro_id=IPR011991 interpro_description=Winged helix-turn-helix transcription repressor DNA-binding) iprscan interpro
DB: Gene3D
  • Identity: 0.0
  • Coverage: 0.0
  • Bit_score: 0
  • Evalue 1.20e-04

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Taxonomy

Sulfobacillus acidophilus → Sulfobacillus → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 522
ATGACGGGAGCGGAGAACGCCATCCAGCGTCTTTACGAAACGGAGTTTTCGGCGCTGGTGCGGCATGCGACCTATATCGCGGGCAGCCGCGACATTGCCGAGGAACTGGTGCAAGAAGCGTTCATCCGATTGATGACCAAGCCGCCGCGTGATCACGAGCGGGTCGGGGCTTGGCTCCGTACGGTGGTCAACCACCTGGCGCTCGATTATGTGCGGCGGCTCAAAGTGGAGGAACGCGCGACGGAGCGGCTGACCGCGGTGGATCGCGTTCCCGGGGTGGAGGAAATCACGATGACCCAGTTTGACCGCGAACGCATTCGGGAGAGCCTTAAAACCTTGAACGGGCGAGACCGCAAGGCATTGATGCTGCGCCATTCGGGATACTCGTACCGGGAGATTGCCGAGCGGCTCAACTGTCCGACGGAACAGGTGGGCGTAATCCTGATTCGGGCCCTGAAAAAACTGAAACACGCCTATCTGGGCGAACACGAATCCGCGCGCGTAAGGGGGGCGGAGGCATGA
PROTEIN sequence
Length: 174
MTGAENAIQRLYETEFSALVRHATYIAGSRDIAEELVQEAFIRLMTKPPRDHERVGAWLRTVVNHLALDYVRRLKVEERATERLTAVDRVPGVEEITMTQFDRERIRESLKTLNGRDRKALMLRHSGYSYREIAERLNCPTEQVGVILIRALKKLKHAYLGEHESARVRGAEA*