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anamox1_curated_scaffold_3065

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox1_curated_scaffold_3065_1
Arthrobacter siccitolerans, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3..650
DNA (648bp) protein (216aa)
Glycosyl transferase Tax=Arthrobacter phenanthrenivorans (strain DSM 18606 / JCM 16027 / LMG 23796 / Sphe3) RepID=F0M233_ARTPP
Polysaccharide deacetylase family protein {ECO:0000313|EMBL:CCQ46287.1}; species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter siccitolerans.;"
glycosyl transferase family protein
anamox1_curated_scaffold_3065_2
unknown

Not on your lists

668..904
DNA (237bp) protein (79aa)

This feature has no annotations

anamox1_curated_scaffold_3065_3
Tetrahymena thermophila, Tetrahymena, Hymenostomatida, Oligohymenophorea, Eukaryota

Not on your lists

858..1622
DNA (765bp) protein (255aa)
Putative uncharacterized protein Tax=Tetrahymena thermophila (strain SB210) RepID=Q24I33_TETTS
Uncharacterized protein {ECO:0000313|EMBL:EAS07405.1}; species="Eukaryota; Alveolata; Ciliophora; Intramacronucleata; Oligohymenophorea; Hymenostomatida; Tetrahymenina; Tetrahymenidae; Tetrahymena.;" source="Tetrahymena thermophila (strain SB210).;"
anamox1_curated_scaffold_3065_4
GWC2_WS6_36_7, WS6, Bacteria

Not on your lists

1903..2328
DNA (426bp) protein (142aa)
N utilization substance protein B-like protein {ECO:0000313|EMBL:KKQ11764.1}; species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWC2_36_7.;"
nusB; antitermination protein NusB; K03625 N utilization substance protein B bin=GWF1_WS6_37_7 species=WS6_GWF1_36_7 genus=WS6_GWF1_36_7 taxon_order=WS6_GWF1_36_7 taxon_class=WS6_GWF1_36_7 phylum=WS6 tax=GWF1_WS6_37_7 organism_group=WS6 (Doikabacteria)
hypothetical protein
anamox1_curated_scaffold_3065_5
WS6_GWF1_33_233, WS6, Bacteria

Not on your lists

2315..3019
DNA (705bp) protein (235aa)
rnc; ribonuclease III (EC:3.1.26.3); K03685 ribonuclease III [EC:3.1.26.3] bin=GWF1_WS6_37_7 species=WS6_GWF1_36_7 genus=WS6_GWF1_36_7 taxon_order=WS6_GWF1_36_7 taxon_class=WS6_GWF1_36_7 phylum=WS6 tax=GWF1_WS6_37_7 organism_group=WS6 (Doikabacteria)
Ribonuclease III, ribonuclease III {ECO:0000313|EMBL:KKP46037.1}; EC=3.1.26.3 {ECO:0000313|EMBL:KKP46037.1};; species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWF1_33_233.;"
hypothetical protein
anamox1_curated_scaffold_3065_6
RIFOXYA2_FULL_Ignavibacteria_37_17_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists


3072..3449
DNA (378bp) protein (126aa)
rpsP; 30S ribosomal protein S16; K02959 small subunit ribosomal protein S16 bin=RAAC39 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria
rpsP; 30S ribosomal protein S16
Tax=RIFOXYA2_FULL_Ignavibacteria_37_17_curated
anamox1_curated_scaffold_3065_7
GWA2_OP11_var_37_36, Levybacteria, Microgenomates, Bacteria

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3461..3694
DNA (234bp) protein (78aa)
hypothetical protein; K06960 bin=GWF1_WS6_37_7 species=WS6_GWF1_36_7 genus=WS6_GWF1_36_7 taxon_order=WS6_GWF1_36_7 taxon_class=WS6_GWF1_36_7 phylum=WS6 tax=GWF1_WS6_37_7 organism_group=WS6 (Doikabacteria)
Uncharacterized protein {ECO:0000313|EMBL:KKQ33737.1}; species="Bacteria; Microgenomates.;" source="Microgenomates (Levybacteria) bacterium GW2011_GWA2_37_36.;"
RNA-binding protein
anamox1_curated_scaffold_3065_8
unknown

Not on your lists

comp(3700..4479)
DNA (780bp) protein (260aa)
no description bin=GWF1_WS6_37_7 species=WS6_GWF1_36_7 genus=WS6_GWF1_36_7 taxon_order=WS6_GWF1_36_7 taxon_class=WS6_GWF1_36_7 phylum=WS6 tax=GWF1_WS6_37_7 organism_group=WS6 (Doikabacteria)
anamox1_curated_scaffold_3065_9
unknown

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comp(4482..5042)
DNA (561bp) protein (187aa)
transmembrane_regions bin=GWF1_WS6_37_7 species=WS6_GWF1_36_7 genus=WS6_GWF1_36_7 taxon_order=WS6_GWF1_36_7 taxon_class=WS6_GWF1_36_7 phylum=WS6 tax=GWF1_WS6_37_7 organism_group=WS6 (Doikabacteria)
anamox1_curated_scaffold_3065_10
GWC1_WS6_36_11, WS6, Bacteria

Not on your lists

comp(5042..6073)
DNA (1032bp) protein (344aa)
competence protein PilM; K02662 type IV pilus assembly protein PilM bin=GWF1_WS6_37_7 species=WS6_GWF1_36_7 genus=WS6_GWF1_36_7 taxon_order=WS6_GWF1_36_7 taxon_class=WS6_GWF1_36_7 phylum=WS6 tax=GWF1_WS6_37_7 organism_group=WS6 (Doikabacteria)
Type IV pilus assembly protein PilM {ECO:0000313|EMBL:KKP92640.1}; species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWC1_36_11.;"
hypothetical protein
anamox1_curated_scaffold_3065_11
[Clostridium] clariflavum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6245..8860
DNA (2616bp) protein (872aa)
Cohesin domain protein Tax=Clostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45) RepID=G8LWU7_CLOCD
Cohesin domain protein
Cohesin domain protein {ECO:0000313|EMBL:AEV69808.1}; Flags: Precursor;; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45).;"
anamox1_curated_scaffold_3065_12
unknown

Not on your lists

8866..9747
DNA (882bp) protein (294aa)

This feature has no annotations

anamox1_curated_scaffold_3065_13
GWA2_WS6_37_6, WS6, Bacteria

Not on your lists

comp(9773..10381)
DNA (609bp) protein (203aa)
transmembrane_regions bin=GWF1_WS6_37_7 species=WS6_GWF1_36_7 genus=WS6_GWF1_36_7 taxon_order=WS6_GWF1_36_7 taxon_class=WS6_GWF1_36_7 phylum=WS6 tax=GWF1_WS6_37_7 organism_group=WS6 (Doikabacteria)
Uncharacterized protein {ECO:0000313|EMBL:KKQ35363.1}; species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWA2_37_6.;"
anamox1_curated_scaffold_3065_14
unknown

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comp(10381..10896)
DNA (516bp) protein (172aa)

This feature has no annotations

anamox1_curated_scaffold_3065_15
unknown

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comp(10886..11482)
DNA (597bp) protein (199aa)

This feature has no annotations

anamox1_curated_scaffold_3065_16
CG_CPR10_03, CG_CPR10, Bacteria

Not on your lists

comp(11637..12224)
DNA (588bp) protein (196aa)
hypothetical protein Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI00036F7777
bacterial Peptidase A24 N-domain family
Tax=CG_CPR10_03
anamox1_curated_scaffold_3065_17
unknown

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comp(12226..12741)
DNA (516bp) protein (172aa)

This feature has no annotations

anamox1_curated_scaffold_3065_18
GWA2_WS6_37_6, WS6, Bacteria

Not on your lists

comp(12695..13126)
DNA (432bp) protein (144aa)
PilA1 bin=GWF1_WS6_37_7 species=WS6_GWF1_36_7 genus=WS6_GWF1_36_7 taxon_order=WS6_GWF1_36_7 taxon_class=WS6_GWF1_36_7 phylum=WS6 tax=GWF1_WS6_37_7 organism_group=WS6 (Doikabacteria)
PilA1 {ECO:0000313|EMBL:KKQ35359.1}; species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWA2_37_6.;"
hypothetical protein
anamox1_curated_scaffold_3065_19
GWA2_WS6_37_6, WS6, Bacteria

Not on your lists

comp(13144..14358)
DNA (1215bp) protein (405aa)
type ii secretion system f domain; K02653 type IV pilus assembly protein PilC bin=GWF1_WS6_37_7 species=WS6_GWF1_36_7 genus=WS6_GWF1_36_7 taxon_order=WS6_GWF1_36_7 taxon_class=WS6_GWF1_36_7 phylum=WS6 tax=GWF1_WS6_37_7 organism_group=WS6 (Doikabacteria)
Uncharacterized protein {ECO:0000313|EMBL:KKQ35358.1}; species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWA2_37_6.;"
type II secretion system protein F
anamox1_curated_scaffold_3065_20
GWF2_WS6_complete_39_15, WS6, Bacteria

Not on your lists

comp(14358..15731)
DNA (1374bp) protein (458aa)
twitching motility protein; K02669 twitching motility protein PilT bin=WS6_GWF2_39_15 species=WS6_CLOSED genus=WS6_CLOSED taxon_order=WS6_CLOSED taxon_class=WS6_CLOSED phylum=WS6 tax=WS6_GWF2_39_15 organism_group=WS6 (Doikabacteria) organism_desc=replace with complete version
Twitching motility protein {ECO:0000313|EMBL:KKR06225.1}; species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWF2_39_15.;"
pilus retraction protein PilT
anamox1_curated_scaffold_3065_21
GWF2_WS6_complete_39_15, WS6, Bacteria

Not on your lists

comp(15740..17521)
DNA (1782bp) protein (594aa)
type iv-a pilus assembly atpase pilb; K02652 type IV pilus assembly protein PilB bin=GWF1_WS6_37_7 species=WS6_GWF1_36_7 genus=WS6_GWF1_36_7 taxon_order=WS6_GWF1_36_7 taxon_class=WS6_GWF1_36_7 phylum=WS6 tax=GWF1_WS6_37_7 organism_group=WS6 (Doikabacteria)
Type II secretion system protein E {ECO:0000313|EMBL:KKR06226.1}; species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWF2_39_15.;"
hypothetical protein
anamox1_curated_scaffold_3065_22
GWA2_WS6_37_6, WS6, Bacteria

Not on your lists

17627..18295
DNA (669bp) protein (223aa)
DNA polymerase III, delta prime subunit; K02341 DNA polymerase III subunit delta' [EC:2.7.7.7] bin=GWF1_WS6_37_7 species=WS6_GWF1_36_7 genus=WS6_GWF1_36_7 taxon_order=WS6_GWF1_36_7 taxon_class=WS6_GWF1_36_7 phylum=WS6 tax=GWF1_WS6_37_7 organism_group=WS6 (Doikabacteria)
Polymerase III subunit delta'' protein {ECO:0000313|EMBL:KKQ34243.1}; species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWA2_37_6.;"
ATPase associated with various cellular activities family protein
anamox1_curated_scaffold_3065_23
RIFOXYB1_FULL_OD1_Magasanikbacteria_40_15_curated, Magasanikbacteria, Parcubacteria, Bacteria

Not on your lists

18325..20268
DNA (1944bp) protein (648aa)
DNA gyrase subunit B (EC:5.99.1.3); K02470 DNA gyrase subunit B [EC:5.99.1.3] bin=GWF1_WS6_37_7 species=WS6_GWF1_36_7 genus=WS6_GWF1_36_7 taxon_order=WS6_GWF1_36_7 taxon_class=WS6_GWF1_36_7 phylum=WS6 tax=GWF1_WS6_37_7 organism_group=WS6 (Doikabacteria)
DNA gyrase subunit B (EC:5.99.1.3)
Tax=RIFOXYB1_FULL_OD1_Magasanikbacteria_40_15_curated
anamox1_curated_scaffold_3065_24
GWA2_WS6_37_6, WS6, Bacteria

Not on your lists


20470..22788
DNA (2319bp) protein (773aa)
gyrA; DNA gyrase subunit A (EC:5.99.1.3); K02469 DNA gyrase subunit A [EC:5.99.1.3] bin=GWF1_WS6_37_7 species=WS6_GWF1_36_7 genus=WS6_GWF1_36_7 taxon_order=WS6_GWF1_36_7 taxon_class=WS6_GWF1_36_7 phylum=WS6 tax=GWF1_WS6_37_7 organism_group=WS6 (Doikabacteria)
Gyrase subunit A protein {ECO:0000313|EMBL:KKQ34531.1}; species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWA2_37_6.;"
hypothetical protein
anamox1_curated_scaffold_3065_25
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

22985..23398
DNA (414bp) protein (138aa)
Putative transcription elongation factor GreB Tax=Herminiimonas arsenicoxydans RepID=A4G183_HERAR
transcription elongation factor GreA/GreB
Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
anamox1_curated_scaffold_3065_26
R_OD1_Falkowbacteria_56_16, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(23482..24561)
DNA (1080bp) protein (360aa)
xerD; site-specific recombinase; K04763 integrase/recombinase XerD bin=GWF1_WS6_37_7 species=WS6_GWF1_36_7 genus=WS6_GWF1_36_7 taxon_order=WS6_GWF1_36_7 taxon_class=WS6_GWF1_36_7 phylum=WS6 tax=GWF1_WS6_37_7 organism_group=WS6 (Doikabacteria)
hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_OD1_Falkowbacteria_56_16_curated
anamox1_curated_scaffold_3065_27
RHI_OP11_Daviesbacteria_37_11, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

comp(24930..25757)
DNA (828bp) protein (276aa)
transmembrane_regions bin=GWF1_WS6_37_7 species=WS6_GWF1_36_7 genus=WS6_GWF1_36_7 taxon_order=WS6_GWF1_36_7 taxon_class=WS6_GWF1_36_7 phylum=WS6 tax=GWF1_WS6_37_7 organism_group=WS6 (Doikabacteria)
Tax=RIFCSPHIGHO2_12_FULL_OP11_Daviesbacteria_37_11_curated
anamox1_curated_scaffold_3065_28
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25754..26011)
DNA (258bp) protein (86aa)
Holliday junction ATP-dependent DNA helicase RuvB {ECO:0000256|HAMAP-Rule:MF_00016}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00016};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
ruvB; Holliday junction DNA helicase RuvB (EC:3.6.1.-)
Holliday junction ATP-dependent DNA helicase RuvB Tax=Sorangium cellulosum So0157-2 RepID=S4XM24_SORCE
Displaying 28 items

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