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anamox1_curated_scaffold_1143

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox1_curated_scaffold_1143_1
RifOxyC12_full_OD1_Magasanikbacteria_33_11_curated, Magasanikbacteria, Parcubacteria, Bacteria

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comp(494..1648)
DNA (1155bp) protein (385aa)
type I restriction-modification system subunit M (EC:2.1.1.72); K03427 type I restriction enzyme M protein [EC:2.1.1.72] bin=OD1_GWC2_34_28 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
type I restriction-modification system subunit M (EC:2.1.1.72)
Tax=RifOxyC12_full_OD1_Magasanikbacteria_33_11_curated
anamox1_curated_scaffold_1143_2
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(1857..2048)
DNA (192bp) protein (64aa)
Type I restriction-modification system, M subunit Tax=Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224) RepID=A6UNC1_METVS
type I restriction-modification system, M subunit
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
anamox1_curated_scaffold_1143_3

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2376..3581
DNA (1206bp) protein (402aa)
Aspartate transaminase Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TP79_NIAKG
Aminotransferase class I and II {ECO:0000313|EMBL:AIA17286.1}; Flags: Fragment;; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
aspartate transaminase
anamox1_curated_scaffold_1143_4
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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3894..6818
DNA (2925bp) protein (975aa)
Uncharacterized protein Tax=Arcticibacter svalbardensis MN12-7 RepID=R9GY08_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:KIC91233.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
glycoside hydrolase family protein
anamox1_curated_scaffold_1143_5
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

6839..7579
DNA (741bp) protein (247aa)
NUDIX hydrolase Tax=Niabella aurantiaca RepID=UPI00037703E3
NUDIX hydrolase
NUDIX hydrolase {ECO:0000313|EMBL:AEW02270.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
anamox1_curated_scaffold_1143_6
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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7682..8710
DNA (1029bp) protein (343aa)
Transcriptional regulator, LacI family Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PRR8_CHIPD
LacI family transcriptional regulator
Transcriptional regulator, LacI family {ECO:0000313|EMBL:ACU58961.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
anamox1_curated_scaffold_1143_7
Fibrella aestuarina, Fibrella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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8870..11983
DNA (3114bp) protein (1038aa)
hypothetical protein Tax=Niabella aurantiaca RepID=UPI000361AD5F
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCH01568.1}; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrella.;" source="Fibrella aestuarina BUZ 2.;"
anamox1_curated_scaffold_1143_8
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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12011..13621
DNA (1611bp) protein (537aa)
hypothetical protein Tax=Niabella aurantiaca RepID=UPI00037EA259
RagB/SusD domain-containing protein
RagB/SusD domain-containing protein {ECO:0000313|EMBL:AEW00106.1}; Flags: Precursor;; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
anamox1_curated_scaffold_1143_9
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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13640..14485
DNA (846bp) protein (282aa)
Uncharacterized protein Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4KX74_HALH1
Uncharacterized protein {ECO:0000313|EMBL:KIC95215.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
hypothetical protein
anamox1_curated_scaffold_1143_10
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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14506..16632
DNA (2127bp) protein (709aa)
Uncharacterized protein Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4L020_HALH1
Uncharacterized protein {ECO:0000313|EMBL:KIC95216.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
hypothetical protein
anamox1_curated_scaffold_1143_11
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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16732..17763
DNA (1032bp) protein (344aa)
Arabinogalactan endo-beta-1,4-galactanase {ECO:0000256|RuleBase:RU361192}; EC=3.2.1.89 {ECO:0000256|RuleBase:RU361192};; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
Glycosyl hydrolase 53 domain protein Tax=Mucilaginibacter paludis DSM 18603 RepID=H1YBD3_9SPHI
arabinogalactan endo-1,4-beta-galactosidase
anamox1_curated_scaffold_1143_12
Haliscomenobacter hydrossis, Haliscomenobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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17750..18013
DNA (264bp) protein (88aa)
Arabinogalactan endo-beta-1,4-galactanase {ECO:0000256|RuleBase:RU361192}; EC=3.2.1.89 {ECO:0000256|RuleBase:RU361192};; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Haliscomenobacter.;" source="Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767; / O).;"
Beta-galactosidase., Arabinogalactan endo-1,4-beta-galactosidase Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4L018_HALH1
beta-galactosidase
anamox1_curated_scaffold_1143_13
Flavobacterium sp. KMS, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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18041..19693
DNA (1653bp) protein (551aa)
SSS sodium solute transporter superfamily Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TCP9_NIAKG
Na+/galactose cotransporter {ECO:0000313|EMBL:KIA94410.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. KMS.;"
SSS sodium solute transporter superfamily protein
anamox1_curated_scaffold_1143_14
unknown

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19704..19901
DNA (198bp) protein (66aa)

This feature has no annotations

anamox1_curated_scaffold_1143_15
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

20146..20922
DNA (777bp) protein (259aa)
Trehalose 6-phosphatase, trehalose 6-phosphate synthase {ECO:0000313|EMBL:AEV98552.1}; EC=2.4.1.15 {ECO:0000313|EMBL:AEV98552.1};; EC=3.1.3.12 {ECO:0000313|EMBL:AEV98552.1};; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Trehalose 6-phosphatase, trehalose 6-phosphate synthase Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8THV7_NIAKG
trehalose 6-phosphatase, trehalose 6-phosphate synthase
anamox1_curated_scaffold_1143_16
Microscilla marina, Microscilla, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

20924..22702
DNA (1779bp) protein (593aa)
Glycoside hydrolase Tax=Microscilla marina ATCC 23134 RepID=A1ZY74_9BACT
Glycoside hydrolase {ECO:0000313|EMBL:EAY24640.1}; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Microscilla.;" source="Microscilla marina ATCC 23134.;"
glycosyl hydrolase
anamox1_curated_scaffold_1143_17
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(22828..23655)
DNA (828bp) protein (276aa)
Uncharacterized protein Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TD31_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV98263.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
anamox1_curated_scaffold_1143_18
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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23905..25164
DNA (1260bp) protein (420aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
PAS/PAC sensor signal transduction histidine kinase Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PAL8_CHIPD
PAS/PAC sensor signal transduction histidine kinase
anamox1_curated_scaffold_1143_19
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

25195..26253
DNA (1059bp) protein (353aa)
Transcriptional regulator, Crp/Fnr family Tax=Niabella soli DSM 19437 RepID=H1NNE3_9SPHI
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:AHF15300.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
anamox1_curated_scaffold_1143_20
Sphingobacterium paucimobilis, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(26363..26833)
DNA (471bp) protein (157aa)
Uncharacterized protein Tax=Sphingobacterium paucimobilis HER1398 RepID=U2J429_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:ERJ57403.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium paucimobilis HER1398.;"
hypothetical protein
Displaying 20 items

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