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anamox1_curated_scaffold_4146

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox1_curated_scaffold_4146_1
unknown

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3..107
DNA (105bp) protein (35aa)

This feature has no annotations

anamox1_curated_scaffold_4146_2
Haliscomenobacter hydrossis, Haliscomenobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(467..937)
DNA (471bp) protein (157aa)
Uncharacterized protein Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4KRI0_HALH1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEE47970.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Haliscomenobacter.;" source="Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767; / O).;"
anamox1_curated_scaffold_4146_3
Haliscomenobacter hydrossis, Haliscomenobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(948..1232)
DNA (285bp) protein (95aa)
Uncharacterized protein Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4KRI1_HALH1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEE47971.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Haliscomenobacter.;" source="Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767; / O).;"
anamox1_curated_scaffold_4146_4
unknown

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comp(1474..1635)
DNA (162bp) protein (54aa)

This feature has no annotations

anamox1_curated_scaffold_4146_5
Mariniradius saccharolyticus, Mariniradius, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(1610..3091)
DNA (1482bp) protein (494aa)
Two component, sigma54 specific, transcriptional regulator, Fis family Tax=Mariniradius saccharolyticus AK6 RepID=M7XH15_9BACT
Two component, sigma54 specific, transcriptional regulator, Fis family {ECO:0000313|EMBL:EMS33828.1}; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Mariniradius.;" source="Mariniradius saccharolyticus AK6.;"
two component, sigma54 specific, Fis family transcriptional regulator
anamox1_curated_scaffold_4146_6
Runella slithyformis, Runella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

3241..4590
DNA (1350bp) protein (450aa)
Helicase Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8EER0_RUNSL
helicase
Helicase {ECO:0000313|EMBL:AEI48259.1}; Flags: Precursor;; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 /; NCIMB 11436 / LSU 4).;"
anamox1_curated_scaffold_4146_7
unknown

Not on your lists

4614..5054
DNA (441bp) protein (147aa)

This feature has no annotations

anamox1_curated_scaffold_4146_8
Runella slithyformis, Runella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

5304..6416
DNA (1113bp) protein (371aa)
RNA-directed DNA polymerase {ECO:0000313|EMBL:AEI48257.1}; EC=2.7.7.49 {ECO:0000313|EMBL:AEI48257.1};; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 /; NCIMB 11436 / LSU 4).;"
RNA-directed DNA polymerase Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8EEQ8_RUNSL
RNA-directed DNA polymerase
anamox1_curated_scaffold_4146_9
unknown

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6418..7278
DNA (861bp) protein (287aa)

This feature has no annotations

anamox1_curated_scaffold_4146_10
unknown

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comp(7275..7553)
DNA (279bp) protein (93aa)

This feature has no annotations

anamox1_curated_scaffold_4146_11
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

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comp(7566..7721)
DNA (156bp) protein (52aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI0003612D7A
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
anamox1_curated_scaffold_4146_12
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

7878..10715
DNA (2838bp) protein (946aa)
hypothetical protein Tax=Niabella aurantiaca RepID=UPI00035CDC2B
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHF17553.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
anamox1_curated_scaffold_4146_13
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(10716..11399)
DNA (684bp) protein (228aa)
Phosphoesterase PA-phosphatase related protein Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TD90_NIAKG
phosphoesterase PA-phosphatase-like protein
Phosphoesterase PA-phosphatase related protein {ECO:0000313|EMBL:AEV99330.1}; Flags: Precursor;; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
anamox1_curated_scaffold_4146_14
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists


comp(11595..14279)
DNA (2685bp) protein (895aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI00037E4940
valyl-tRNA synthetase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
anamox1_curated_scaffold_4146_15
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(14384..14776)
DNA (393bp) protein (131aa)
Two component transcriptional regulator, LuxR family Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T8W3_NIAKG
two component transcriptional regulator, LuxR family
Two component transcriptional regulator, LuxR family {ECO:0000313|EMBL:AEW02320.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
anamox1_curated_scaffold_4146_16
unknown

Not on your lists

15114..15641
DNA (528bp) protein (176aa)
hypothetical protein Tax=Spirosoma spitsbergense RepID=UPI000371F749
anamox1_curated_scaffold_4146_17
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

15666..16397
DNA (732bp) protein (244aa)
Esterase Tax=Niabella soli DSM 19437 RepID=H1NJP4_9SPHI
Esterase {ECO:0000313|EMBL:KIC92723.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
esterase
anamox1_curated_scaffold_4146_18
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(16463..17131)
DNA (669bp) protein (223aa)
Leucyl/phenylalanyl-tRNA--protein transferase {ECO:0000256|HAMAP-Rule:MF_00688, ECO:0000256|SAAS:SAAS00088489}; EC=2.3.2.6 {ECO:0000256|HAMAP-Rule:MF_00688, ECO:0000256|SAAS:SAAS00088482};; L/F-transferase {ECO:0000256|HAMAP-Rule:MF_00688}; Leucyltransferase {ECO:0000256|HAMAP-Rule:MF_00688}; Phenyalanyltransferase {ECO:0000256|HAMAP-Rule:MF_00688}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Leucyl/phenylalanyl-tRNA--protein transferase Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TD83_NIAKG
leucyl/phenylalanyl-tRNA--protein transferase
anamox1_curated_scaffold_4146_19
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(17175..17477)
DNA (303bp) protein (101aa)
ATP-dependent Clp protease adaptor protein ClpS Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TD82_NIAKG
ATP-dependent Clp protease adaptor protein ClpS
ATP-dependent Clp protease adaptor protein ClpS {ECO:0000313|EMBL:AEV99322.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
anamox1_curated_scaffold_4146_20
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

18218..21466
DNA (3249bp) protein (1083aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI000368C936
TonB-dependent receptor plug
TonB-dependent receptor plug {ECO:0000313|EMBL:AEV96574.1}; Flags: Precursor;; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
anamox1_curated_scaffold_4146_21
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

21478..22929
DNA (1452bp) protein (484aa)
RagB/SusD domain protein Tax=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) RepID=A5FMX2_FLAJ1
Uncharacterized protein {ECO:0000313|EMBL:GAO45601.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
hypothetical protein
anamox1_curated_scaffold_4146_trna_1
unknown

Not on your lists

23351..23425
DNA (75bp)
transferRNA Val
Displaying 22 items

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