ggKbase home page

anamox1_curated_scaffold_4842

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox1_curated_scaffold_4842_1
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(74..1330)
DNA (1257bp) protein (419aa)
Aspartate transaminase Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T8V6_NIAKG
Aminotransferase {ECO:0000313|EMBL:KIC96310.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
aspartate transaminase
anamox1_curated_scaffold_4842_2
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(1498..4749)
DNA (3252bp) protein (1084aa)
Uncharacterized protein Tax=Fulvivirga imtechensis AK7 RepID=L8JY33_9BACT
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
anamox1_curated_scaffold_4842_trna_1
unknown

Not on your lists

comp(4873..4946)
DNA (74bp)
transferRNA Thr
anamox1_curated_scaffold_4842_3
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(5057..7900)
DNA (2844bp) protein (948aa)
hypothetical protein Tax=Oxalobacteraceae bacterium AB_14 RepID=UPI00035FC734
Peptidase M16 {ECO:0000313|EMBL:KIC93257.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
insulinase family protein
anamox1_curated_scaffold_4842_4
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(8054..8617)
DNA (564bp) protein (188aa)
Peptide methionine sulfoxide reductase MsrB {ECO:0000256|HAMAP-Rule:MF_01400}; EC=1.8.4.12 {ECO:0000256|HAMAP-Rule:MF_01400};; Peptide-methionine (R)-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01400}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
Peptide methionine sulfoxide reductase MsrB Tax=Niabella soli DSM 19437 RepID=H1NS76_9SPHI
methionine sulfoxide reductase
anamox1_curated_scaffold_4842_5
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

8779..9357
DNA (579bp) protein (193aa)
Adenylate kinase {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331}; Short=AK {ECO:0000256|HAMAP-Rule:MF_00235};; EC=2.7.4.3 {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331};; ATP-AMP transphosphorylase {ECO:0000256|HAMAP-Rule:MF_00235}; ATP:AMP phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00235}; Adenylate monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_00235}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
adenylate kinase Tax=Niabella aurantiaca RepID=UPI00035F05F4
adenylate kinase
anamox1_curated_scaffold_4842_6
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(9374..9889)
DNA (516bp) protein (172aa)
Viral A-type inclusion protein Tax=Niabella soli DSM 19437 RepID=H1NS74_9SPHI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHF17810.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
anamox1_curated_scaffold_4842_7
Flavobacteria bacterium BAL38, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(9867..10265)
DNA (399bp) protein (133aa)
Superoxide dismutase {ECO:0000256|RuleBase:RU000414}; EC=1.15.1.1 {ECO:0000256|RuleBase:RU000414};; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales.;" source="Flavobacteria bacterium BAL38.;"
Superoxide dismutase Tax=Flavobacteria bacterium BAL38 RepID=A3J209_9FLAO
hypothetical protein
anamox1_curated_scaffold_4842_8
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

10361..12412
DNA (2052bp) protein (684aa)
Phenylacetic acid degradation protein paaN {ECO:0000313|EMBL:AEW02302.1}; EC=1.2.1.3 {ECO:0000313|EMBL:AEW02302.1};; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Phenylacetic acid degradation protein paaN Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T8U5_NIAKG
phenylacetic acid degradation protein paaN
anamox1_curated_scaffold_4842_9
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

12482..13255
DNA (774bp) protein (258aa)
Enoyl-CoA hydratase/isomerase Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T8U6_NIAKG
Enoyl-CoA hydratase/isomerase
Enoyl-CoA hydratase/isomerase {ECO:0000313|EMBL:AEW02303.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
anamox1_curated_scaffold_4842_10

Not on your lists

13299..14162
DNA (864bp) protein (288aa)
Spore coat polysaccharide biosynthesis protein spsK Tax=uncultured bacterium RepID=K1XTQ8_9BACT
Spore coat polysaccharide biosynthesis protein spsK {ECO:0000313|EMBL:EKD28632.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
dTDP-4-dehydrorhamnose reductase
anamox1_curated_scaffold_4842_11
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14461..15828
DNA (1368bp) protein (456aa)
Uncharacterized protein bin=GWE2_Bacteroidetes_42_39 species=unknown genus=Bacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_42_39 organism_group=Bacteroidetes organism_desc=Good +
Tax=GWE2_Bacteroidetes_42_39_curated
anamox1_curated_scaffold_4842_12
unknown

Not on your lists

15825..15953
DNA (129bp) protein (43aa)

This feature has no annotations

anamox1_curated_scaffold_4842_13
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(16018..16773)
DNA (756bp) protein (252aa)
3-oxoacyl-(Acyl-carrier-protein) reductase Tax=Niabella soli DSM 19437 RepID=H1NTY7_9SPHI
3-oxoacyl-ACP synthase
3-oxoacyl-ACP synthase {ECO:0000313|EMBL:AHF16175.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
anamox1_curated_scaffold_4842_14
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(16781..18307)
DNA (1527bp) protein (509aa)
GH3 auxin-responsive promoter Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T8V0_NIAKG
GH3 auxin-responsive promoter
GH3 auxin-responsive promoter {ECO:0000313|EMBL:AEW02307.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
anamox1_curated_scaffold_4842_15
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(18349..19134)
DNA (786bp) protein (262aa)
Sulfate-transporting ATPase Tax=Niabella soli DSM 19437 RepID=H1NT07_9SPHI
ABC transporter ATP-binding protein
ABC transporter ATP-binding protein {ECO:0000313|EMBL:AHF16093.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
anamox1_curated_scaffold_4842_16
unknown

Not on your lists

19393..20127
DNA (735bp) protein (245aa)

This feature has no annotations

Displaying 17 items

View Taxonomy