ggKbase home page

anamox1_curated_scaffold_3901

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox1_curated_scaffold_3901_1
Planococcus donghaensis, Planococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

3..266
DNA (264bp) protein (88aa)
Probable D-serine dehydratase {ECO:0000256|HAMAP-Rule:MF_01030}; EC=4.3.1.18 {ECO:0000256|HAMAP-Rule:MF_01030};; D-serine deaminase {ECO:0000256|HAMAP-Rule:MF_01030}; species="Bacteria; Firmicutes; Bacilli; Bacillales; Planococcaceae; Planococcus.;" source="Planococcus donghaensis MPA1U2.;"
D-serine dehydratase (EC:4.3.1.18)
Probable D-serine dehydratase Tax=Planococcus donghaensis MPA1U2 RepID=E7RHN0_9BACL
anamox1_curated_scaffold_3901_2
Tolypothrix sp. PCC 7601, Tolypothrix, Nostocales, Cyanobacteria, Bacteria

Not on your lists

784..2586
DNA (1803bp) protein (601aa)
Putative uncharacterized protein Tax=Cellulophaga algicola (strain DSM 14237 / IC166 / ACAM 630) RepID=E6X3S5_CELAD
Uncharacterized protein {ECO:0000313|EMBL:EKF00168.1}; species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Tolypothrix.;" source="Tolypothrix sp. PCC 7601.;"
hypothetical protein
anamox1_curated_scaffold_3901_3
Bacillus azotoformans, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

2957..3562
DNA (606bp) protein (202aa)
Transglutaminase Tax=Bacillus azotoformans LMG 9581 RepID=K6D3V7_BACAZ
Transglutaminase {ECO:0000313|EMBL:EKN67177.1}; species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus azotoformans LMG 9581.;"
transglutaminase-like enzyme, predicted cysteine protease
anamox1_curated_scaffold_3901_4
Porphyromonas uenonis, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3640..3993)
DNA (354bp) protein (118aa)
Tyrosine recombinase XerC Tax=Porphyromonas uenonis 60-3 RepID=C2MBI5_9PORP
Tyrosine recombinase XerC {ECO:0000256|HAMAP-Rule:MF_01808}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas uenonis 60-3.;"
anamox1_curated_scaffold_3901_5
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(4128..5066)
DNA (939bp) protein (313aa)
GHMP kinase Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2I9K8_FLUTR
GHMP kinase
GHMP kinase {ECO:0000313|EMBL:AEA45189.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
anamox1_curated_scaffold_3901_6
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(5053..6084)
DNA (1032bp) protein (344aa)
Diphosphomevalonate decarboxylase Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2I9K9_FLUTR
diphosphomevalonate decarboxylase
Diphosphomevalonate decarboxylase {ECO:0000313|EMBL:AEA45190.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
anamox1_curated_scaffold_3901_7
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(6088..6984)
DNA (897bp) protein (299aa)
Uncharacterized protein Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2I9L0_FLUTR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA45191.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
anamox1_curated_scaffold_3901_8
R_Bacteroidetes_44_7, Bacteroidetes, Bacteria

Not on your lists

comp(7083..8414)
DNA (1332bp) protein (444aa)
hydroxymethylglutaryl-CoA reductase (EC:1.1.1.88)
Hydroxymethylglutaryl-CoA reductase, degradative Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2I9L1_FLUTR
Tax=RIFCSPHIGHO2_02_FULL_Bacteroidetes_44_7_curated
anamox1_curated_scaffold_3901_9
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(8404..9456)
DNA (1053bp) protein (351aa)
Isopentenyl-diphosphate Delta-isomerase (EC:5.3.3.2)
Isopentenyl-diphosphate Delta-isomerase {ECO:0000313|EMBL:AEA45193.1}; EC=5.3.3.2 {ECO:0000313|EMBL:AEA45193.1};; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
Isopentenyl-diphosphate Delta-isomerase Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2I9L2_FLUTR
anamox1_curated_scaffold_3901_10
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9726..10334
DNA (609bp) protein (203aa)
Uncharacterized protein Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SEX6_NOCSJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABL80361.1}; species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
anamox1_curated_scaffold_3901_11
Elizabethkingia meningoseptica, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

10479..11045
DNA (567bp) protein (189aa)
Uncharacterized protein Tax=Elizabethkingia meningoseptica ATCC 13253 = NBRC 12535 RepID=R9CT38_ELIME
Uncharacterized protein {ECO:0000313|EMBL:EOR30316.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia meningoseptica ATCC 13253 = NBRC 12535.;"
Thioredoxin
anamox1_curated_scaffold_3901_12
Fulvivirga imtechensis, Fulvivirga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(11105..12964)
DNA (1860bp) protein (620aa)
TonB-dependent receptor Tax=Fulvivirga imtechensis AK7 RepID=L8JRC4_9BACT
TonB-dependent receptor {ECO:0000313|EMBL:ELR71415.1}; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; Fulvivirga.;" source="Fulvivirga imtechensis AK7.;"
hypothetical protein
anamox1_curated_scaffold_3901_13
Flavobacterium sp. KMS, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(13126..15441)
DNA (2316bp) protein (772aa)
Aminotransferase Tax=Flavobacterium sp. F52 RepID=J1KN34_9FLAO
Aminotransferase {ECO:0000313|EMBL:KIA97795.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. KMS.;"
aminotransferase
anamox1_curated_scaffold_3901_14

Not on your lists

comp(15662..18307)
DNA (2646bp) protein (882aa)
Uncharacterized protein Tax=Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896) RepID=D2QP79_SPILD
Uncharacterized protein {ECO:0000313|EMBL:KKO05014.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
anamox1_curated_scaffold_3901_15
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(18371..21211)
DNA (2841bp) protein (947aa)
Peptidase S9, prolyl oligopeptidase active site domain protein Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01S62_SOLUE
peptidase S9 prolyl oligopeptidase
Peptidase S9, prolyl oligopeptidase active site domain protein {ECO:0000313|EMBL:ABJ87508.1}; Flags: Precursor;; species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
anamox1_curated_scaffold_3901_16
unknown

Not on your lists

21762..22616
DNA (855bp) protein (285aa)

This feature has no annotations

anamox1_curated_scaffold_3901_17
unknown

Not on your lists

22622..24004
DNA (1383bp) protein (461aa)
hypothetical protein Tax=Flexithrix dorotheae RepID=UPI000368D2D7
anamox1_curated_scaffold_3901_18
Flavobacterium limnosediminis, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(24048..25031)
DNA (984bp) protein (328aa)
Cytochrome c-like protein Tax=Flavobacterium limnosediminis JC2902 RepID=V6SS28_9FLAO
Cytochrome c-like protein {ECO:0000313|EMBL:ESU28997.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium limnosediminis JC2902.;"
cytochrome c-like protein
anamox1_curated_scaffold_3901_19
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(25480..25899)
DNA (420bp) protein (140aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI0003693A45
nuclear protein SET
Nuclear protein SET {ECO:0000313|EMBL:KIC94124.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
anamox1_curated_scaffold_3901_20
Pontibacter sp. BAB1700, Pontibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(26344..27984)
DNA (1641bp) protein (547aa)
Uncharacterized protein Tax=Pontibacter sp. BAB1700 RepID=J0LB81_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EJF08805.1}; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Pontibacter.;" source="Pontibacter sp. BAB1700.;"
hypothetical protein
anamox1_curated_scaffold_3901_21
Pedobacter sp. NL19, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(28205..29317)
DNA (1113bp) protein (371aa)
hypothetical protein Tax=Dyadobacter beijingensis RepID=UPI0003695494
Contig28, whole genome shotgun sequence {ECO:0000313|EMBL:KIO77886.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. NL19.;"
hypothetical protein
anamox1_curated_scaffold_3901_22
Chryseobacterium jeonii, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

29579..30016
DNA (438bp) protein (146aa)
Alkyl hydroperoxide reductase AhpD {ECO:0000256|SAAS:SAAS00088523}; EC=1.11.1.15 {ECO:0000256|SAAS:SAAS00088503};; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium jeonii.;"
Uncharacterized protein Tax=Paenibacillus dendritiformis C454 RepID=H3SKK2_9BACL
carboxymuconolactone decarboxylase
anamox1_curated_scaffold_3901_23
Joostella marina, Joostella, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(30132..30602)
DNA (471bp) protein (157aa)
Uncharacterized protein Tax=Joostella marina DSM 19592 RepID=I3C2A6_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EIJ37749.1}; Flags: Precursor;; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Joostella.;" source="Joostella marina DSM 19592.;"
DoxX family protein
anamox1_curated_scaffold_3901_24
Sphingobacterium spiritivorum, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

30703..32493
DNA (1791bp) protein (597aa)
Chloride transporter, ClC family Tax=Sphingobacterium spiritivorum ATCC 33861 RepID=D7VRT9_9SPHI
Chloride transporter, ClC family {ECO:0000313|EMBL:EFK56490.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium spiritivorum ATCC 33861.;"
Cl-channel voltage-gated family protein
anamox1_curated_scaffold_3901_25
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

33005..34048
DNA (1044bp) protein (348aa)
hypothetical protein Tax=Nafulsella turpanensis RepID=UPI00034B5C7C
C4-dicarboxylate ABC transporter
C4-dicarboxylate ABC transporter {ECO:0000313|EMBL:AKD58451.1}; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
anamox1_curated_scaffold_3901_26
Galbibacter marinus, Galbibacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

34149..35369
DNA (1221bp) protein (407aa)
Major facilitator superfamily protein Tax=Galbibacter marinus RepID=K2PST3_9FLAO
Major facilitator superfamily protein {ECO:0000313|EMBL:EKF54644.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Galbibacter.;" source="Galbibacter marinus.;"
arabinose efflux permease family protein
Displaying 26 items

View Taxonomy