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anamox1_curated_scaffold_2036

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox1_curated_scaffold_2036_1
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

1..738
DNA (738bp) protein (246aa)
Glutamate synthase {ECO:0000313|EMBL:KIC95662.1}; EC=1.4.1.13 {ECO:0000313|EMBL:KIC95662.1};; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
Glutamate synthase (NADH) small subunit Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TK76_NIAKG
glutamate synthase (NADH) small subunit
anamox1_curated_scaffold_2036_2
RLO_Flavobacteria_35_11, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(751..1770)
DNA (1020bp) protein (340aa)
Adenine specific DNA methyltransferase Tax=Muricauda ruestringensis (strain DSM 13258 / LMG 19739 / B1) RepID=G2PIV2_MURRD
adenine specific DNA methyltransferase
Tax=RIFCSPLOWO2_12_FULL_Flavobacteria_35_11_curated
anamox1_curated_scaffold_2036_3
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

2185..5304
DNA (3120bp) protein (1040aa)
hypothetical protein Tax=Pontibacter roseus RepID=UPI0003781498
TonB-dependent receptor {ECO:0000313|EMBL:KIC92147.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
TonB-dependent receptor
anamox1_curated_scaffold_2036_4
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

5315..6724
DNA (1410bp) protein (470aa)
Uncharacterized protein Tax=Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896) RepID=D2QBI5_SPILD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AKD54361.1}; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
anamox1_curated_scaffold_2036_5
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(6819..9398)
DNA (2580bp) protein (860aa)
Phosphoenolpyruvate carboxylase {ECO:0000256|SAAS:SAAS00018769}; EC=4.1.1.31 {ECO:0000256|SAAS:SAAS00018769};; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Phosphoenolpyruvate carboxylase, type 1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TK80_NIAKG
Phosphoenolpyruvate carboxylase, type 1
anamox1_curated_scaffold_2036_6
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists


comp(9535..10026)
DNA (492bp) protein (164aa)
50S ribosomal protein L17 Tax=Niabella soli DSM 19437 RepID=H1NUG3_9SPHI
50S ribosomal protein L17
50S ribosomal protein L17 {ECO:0000256|HAMAP-Rule:MF_01368, ECO:0000256|RuleBase:RU000661}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
anamox1_curated_scaffold_2036_7
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(10136..11137)
DNA (1002bp) protein (334aa)
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Transcriptase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
DNA-directed RNA polymerase subunit alpha Tax=Niabella soli DSM 19437 RepID=H1NUG4_9SPHI
DNA-directed RNA polymerase subunit alpha
anamox1_curated_scaffold_2036_8
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists


comp(11236..11841)
DNA (606bp) protein (202aa)
30S ribosomal protein S4 Tax=Niabella soli DSM 19437 RepID=H1NUG5_9SPHI
30S ribosomal protein S4
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
anamox1_curated_scaffold_2036_9
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists


comp(12004..12417)
DNA (414bp) protein (138aa)
30S ribosomal protein S11 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TIA0_NIAKG
30S ribosomal protein S11
30S ribosomal protein S11 {ECO:0000256|HAMAP-Rule:MF_01310}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
anamox1_curated_scaffold_2036_10
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists


comp(12478..12858)
DNA (381bp) protein (127aa)
30S ribosomal protein S13 Tax=Niabella aurantiaca RepID=UPI00035F8657
30S ribosomal protein S13
30S ribosomal protein S13 {ECO:0000256|HAMAP-Rule:MF_01315}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
anamox1_curated_scaffold_2036_11
Croceibacter atlanticus, Croceibacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(12926..13042)
DNA (117bp) protein (39aa)
50S ribosomal protein L36 Tax=Flavobacteriaceae RepID=A3U7N8_CROAH
50S ribosomal protein L36
50S ribosomal protein L36 {ECO:0000256|HAMAP-Rule:MF_00251, ECO:0000256|RuleBase:RU000571}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Croceibacter.;" source="Croceibacter atlanticus (strain ATCC BAA-628 / HTCC2559 / KCTC 12090).;"
anamox1_curated_scaffold_2036_12
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(13120..13338)
DNA (219bp) protein (73aa)
translation initiation factor IF-1 Tax=Niabella aurantiaca RepID=UPI00036D4AD7
infA; translation initiation factor IF-1
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
anamox1_curated_scaffold_2036_13
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(13462..13857)
DNA (396bp) protein (132aa)
hypothetical protein Tax=Niabella aurantiaca RepID=UPI0003698140
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHF17688.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
anamox1_curated_scaffold_2036_14
BJP_IG2102_Ignavibacteriales_35_8, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(14044..16803)
DNA (2760bp) protein (920aa)
Peptidase M16 domain protein bin=GWC2_Ignavibacteria_56_12 species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWC2_Ignavibacteria_56_12 organism_group=Ignavibacteria organism_desc=Larger genome
peptidase M16 domain-containing protein
Tax=BJP_IG2102_Ignavibacteriales_35_8
anamox1_curated_scaffold_2036_15

Not on your lists

17144..18418
DNA (1275bp) protein (425aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI00035F0B96
Putative transport transmembrane protein {ECO:0000313|EMBL:ACN58979.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium BLR19.;"
yhjE; inner membrane metabolite transport protein yhjE
anamox1_curated_scaffold_2036_16
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

18507..19064
DNA (558bp) protein (186aa)
Uncharacterized protein Tax=Niabella soli DSM 19437 RepID=H1NSE0_9SPHI
transposase
Transposase {ECO:0000313|EMBL:AHF16677.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
anamox1_curated_scaffold_2036_17
RLO_Flavobacteria_35_11, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(19193..20440)
DNA (1248bp) protein (416aa)
Beta-lactamase Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4KR89_HALH1
beta-lactamase
Tax=RIFCSPLOWO2_12_FULL_Flavobacteria_35_11_curated
anamox1_curated_scaffold_2036_18
unknown

Not on your lists

comp(20526..20912)
DNA (387bp) protein (129aa)
hypothetical protein Tax=Nitrospina sp. SCGC AAA288-L16 RepID=UPI00037FA2BA
anamox1_curated_scaffold_2036_19
Chlorobium ferrooxidans, Chlorobium, Chlorobiales, Chlorobia, Chlorobi, Bacteria

Not on your lists

comp(21299..22066)
DNA (768bp) protein (256aa)
Uncharacterized protein Tax=Chlorobium ferrooxidans DSM 13031 RepID=Q0YRR0_9CHLB
Uncharacterized protein {ECO:0000313|EMBL:EAT58955.1}; species="Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae; Chlorobium/Pelodictyon group; Chlorobium.;" source="Chlorobium ferrooxidans DSM 13031.;"
restriction endonuclease
anamox1_curated_scaffold_2036_20
unknown

Not on your lists

comp(22084..22335)
DNA (252bp) protein (84aa)

This feature has no annotations

anamox1_curated_scaffold_2036_21
Chryseobacterium jeonii, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(22702..23277)
DNA (576bp) protein (192aa)
hypothetical protein Tax=Pedobacter arcticus RepID=UPI00031C5B6E
Fasciclin {ECO:0000313|EMBL:KIA89620.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium jeonii.;"
hypothetical protein
anamox1_curated_scaffold_2036_22
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(23598..24755)
DNA (1158bp) protein (386aa)
Homogentisate 12-dioxygenase Tax=Niabella soli DSM 19437 RepID=H1NPN5_9SPHI
homogentisate 1,2-dioxygenase
Homogentisate 1,2-dioxygenase {ECO:0000313|EMBL:AHF14961.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
anamox1_curated_scaffold_2036_23
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(25121..25912)
DNA (792bp) protein (264aa)
Putative uncharacterized protein Tax=Mucilaginibacter paludis DSM 18603 RepID=H1YH45_9SPHI
Putative uncharacterized protein {ECO:0000313|EMBL:EHQ27309.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
hypothetical protein
anamox1_curated_scaffold_2036_24
unknown

Not on your lists

comp(25959..26171)
DNA (213bp) protein (71aa)
hypothetical protein Tax=Spirosoma spitsbergense RepID=UPI00037A74DA
hypothetical protein
anamox1_curated_scaffold_2036_25
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

26425..26829
DNA (405bp) protein (135aa)
NUDIX hydrolase Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PS96_CHIPD
NUDIX hydrolase
NUDIX hydrolase {ECO:0000313|EMBL:ACU62660.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
anamox1_curated_scaffold_2036_26
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

26907..27419
DNA (513bp) protein (171aa)
Metallophosphoesterase Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TIB9_NIAKG
metallophosphoesterase
Metallophosphoesterase {ECO:0000313|EMBL:AEW00736.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
anamox1_curated_scaffold_2036_27
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(27461..27919)
DNA (459bp) protein (153aa)
hypothetical protein Tax=Niabella aurantiaca RepID=UPI00037E7877
Eukaryotic cytochrome b561
Eukaryotic cytochrome b561 {ECO:0000313|EMBL:AHF15737.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
anamox1_curated_scaffold_2036_28
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(27968..29095)
DNA (1128bp) protein (376aa)
hypothetical protein Tax=Balneola vulgaris RepID=UPI00036D2BFC
Uncharacterized protein {ECO:0000313|EMBL:KIC93588.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
periplasmic component of the Tol biopolymer transport system
anamox1_curated_scaffold_2036_29
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

29214..29768
DNA (555bp) protein (185aa)
Tetratricopeptide TPR_1 repeat-containing protein Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TPD5_NIAKG
hypothetical protein
Tetratricopeptide TPR_1 repeat-containing protein {ECO:0000313|EMBL:AEV96741.1}; Flags: Precursor;; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Displaying 29 items

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