ggKbase home page

anamox1_curated_scaffold_471

Search features with annotation key words

Displaying items 1-30 of 46 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox1_curated_scaffold_471_1
Bacteroides nordii, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2..955)
DNA (954bp) protein (318aa)
Uncharacterized protein Tax=Bacteroides nordii CL02T12C05 RepID=I9SH16_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY54988.1}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides nordii CL02T12C05.;"
ATPase
anamox1_curated_scaffold_471_2
Arcobacter butzleri, Arcobacter, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1067..1867)
DNA (801bp) protein (267aa)
Oxidoreductase {ECO:0000313|EMBL:EFU70288.1}; EC=1.-.-.- {ECO:0000313|EMBL:EFU70288.1};; species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Campylobacteraceae; Arcobacter.;" source="Arcobacter butzleri JV22.;"
Oxidoreductase Tax=Arcobacter butzleri JV22 RepID=E6L2T2_9PROT
hypothetical protein
anamox1_curated_scaffold_471_3
Bacteroides finegoldii CAG:203, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1942..2589)
DNA (648bp) protein (216aa)
Uncharacterized protein Tax=Bacteroides finegoldii CAG:203 RepID=R6S4Y7_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDC52664.1}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides finegoldii CAG:203.;"
hypothetical protein
anamox1_curated_scaffold_471_4
RIFOXYD12_FULL_Deltaproteobacteria_53_23_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2553..2849)
DNA (297bp) protein (99aa)
hypothetical protein Tax=Anaerophaga thermohalophila RepID=UPI00036FB2CD
hypothetical protein
Tax=RIFOXYD12_FULL_Deltaproteobacteria_53_23_curated
anamox1_curated_scaffold_471_5
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(2954..3826)
DNA (873bp) protein (291aa)
Glucose-1-phosphate thymidylyltransferase {ECO:0000256|RuleBase:RU003706}; EC=2.7.7.24 {ECO:0000256|RuleBase:RU003706};; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
glucose-1-phosphate thymidylyltransferase Tax=Niabella aurantiaca RepID=UPI0003805BAD
glucose-1-phosphate thymidylyltransferase
anamox1_curated_scaffold_471_6
RIFOXYC2_FULL_Ignavibacteria_38_25_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(3976..4353)
DNA (378bp) protein (126aa)
S23 ribosomal protein bin=GWF2_Melioribacter_38_21 species=Caldithrix abyssi genus=Caldithrix taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Melioribacter_38_21 organism_group=Ignavibacteria
S23 ribosomal protein
Tax=RIFOXYC2_FULL_Ignavibacteria_38_25_curated
anamox1_curated_scaffold_471_7
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(4479..5543)
DNA (1065bp) protein (355aa)
dTDP-glucose 4,6-dehydratase Tax=Segetibacter koreensis RepID=UPI0003726AE0
dTDP-glucose 4,6-dehydratase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
anamox1_curated_scaffold_471_8
Pontibacter korlensis, Pontibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(5566..6528)
DNA (963bp) protein (321aa)
hypothetical protein Tax=Niabella aurantiaca RepID=UPI0003804A01
Vi polysaccharide biosynthesis protein VipB/TviC
Vi polysaccharide biosynthesis protein VipB/TviC {ECO:0000313|EMBL:AKD02914.1}; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Pontibacter.;" source="Pontibacter korlensis.;"
anamox1_curated_scaffold_471_9
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(6541..8976)
DNA (2436bp) protein (812aa)
Capsular exopolysaccharide family {ECO:0000313|EMBL:AEW02970.1}; EC=2.7.10.2 {ECO:0000313|EMBL:AEW02970.1};; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
hypothetical protein Tax=Niabella aurantiaca RepID=UPI00037E18EC
capsular exopolysaccharide family protein
anamox1_curated_scaffold_471_10
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(9010..9822)
DNA (813bp) protein (271aa)
hypothetical protein Tax=Niabella aurantiaca RepID=UPI0003720EA4
Soluble ligand binding domain-containing protein
Soluble ligand binding domain protein {ECO:0000313|EMBL:AEW02969.1}; Flags: Precursor;; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
anamox1_curated_scaffold_471_11
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(9879..10373)
DNA (495bp) protein (165aa)
NusG antitermination factor Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TK30_NIAKG
NusG antitermination factor
NusG antitermination factor {ECO:0000313|EMBL:AEW02968.1}; Flags: Precursor;; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
anamox1_curated_scaffold_471_12
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10575..11156)
DNA (582bp) protein (194aa)
hexapeptide transferase Tax=Niabella aurantiaca RepID=UPI000362CB88
transferase hexapeptide repeat containing protein
Tax=GWE2_Bacteroidetes_42_39_curated
anamox1_curated_scaffold_471_13
Sphingobacterium sp. PM2-P1-29, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

11225..12397
DNA (1173bp) protein (391aa)
membrane protein Tax=Niabella aurantiaca RepID=UPI00037AF298
Uncharacterized protein {ECO:0000313|EMBL:CDT10258.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. PM2-P1-29.;"
membrane protein
anamox1_curated_scaffold_471_14
Devosia geojensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12593..13045
DNA (453bp) protein (151aa)
heat shock protein Tax=Pedobacter agri RepID=UPI00029ABB7D
Uncharacterized protein {ECO:0000313|EMBL:KKB12840.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;"
hypothetical protein
anamox1_curated_scaffold_471_15
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(13037..14182)
DNA (1146bp) protein (382aa)
radical SAM protein Tax=Niabella aurantiaca RepID=UPI0003769235
radical SAM protein
Radical SAM protein {ECO:0000313|EMBL:AHF15019.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
anamox1_curated_scaffold_471_16
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(14285..14905)
DNA (621bp) protein (207aa)
Uncharacterized protein Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TK13_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW02951.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
anamox1_curated_scaffold_471_17
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

14979..15410
DNA (432bp) protein (144aa)
SOS response UmuD protein Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TK11_NIAKG
SOS response UmuD protein
SOS response UmuD protein {ECO:0000313|EMBL:AEW02949.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
anamox1_curated_scaffold_471_18
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

15496..16776
DNA (1281bp) protein (427aa)
DNA-directed DNA polymerase Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TK10_NIAKG
Uncharacterized protein {ECO:0000313|EMBL:KIC92239.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
DNA-directed DNA polymerase
anamox1_curated_scaffold_471_19
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

16778..17311
DNA (534bp) protein (178aa)
Uncharacterized protein Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TG35_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW01638.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
anamox1_curated_scaffold_471_20
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

17278..18039
DNA (762bp) protein (254aa)
Uncharacterized protein Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TG36_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW01639.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
anamox1_curated_scaffold_471_21
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

18044..19210
DNA (1167bp) protein (389aa)
Uncharacterized conserved protein UCP016719 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TP78_NIAKG
Uncharacterized protein {ECO:0000313|EMBL:GAO43987.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
hypothetical protein
anamox1_curated_scaffold_471_22
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(19204..20019)
DNA (816bp) protein (272aa)
N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TK05_NIAKG
N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD
N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD {ECO:0000313|EMBL:AEW02943.1}; Flags: Precursor;; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
anamox1_curated_scaffold_471_23
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(20132..22540)
DNA (2409bp) protein (803aa)
Uncharacterized protein Tax=Niabella soli DSM 19437 RepID=H1NJL6_9SPHI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHF17077.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
anamox1_curated_scaffold_471_24
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(22644..23435)
DNA (792bp) protein (264aa)
membrane protein Tax=Segetibacter koreensis RepID=UPI00037BB1FA
hypothetical protein
SPFH domain, Band 7 family protein {ECO:0000313|EMBL:AEW02553.1}; Flags: Precursor;; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
anamox1_curated_scaffold_471_25
Solitalea canadensis, Solitalea, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(23447..24748)
DNA (1302bp) protein (434aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI0003802816
membrane-bound serine protease
Membrane-bound serine protease (ClpP class) {ECO:0000313|EMBL:AFD05894.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Solitalea.;" source="Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 /; NCIMB 12057 / USAM 9D) (Flexibacter canadensis).;"
anamox1_curated_scaffold_471_26
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(24951..28370)
DNA (3420bp) protein (1140aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI0003719872
methylmalonyl-CoA mutase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
anamox1_curated_scaffold_471_27
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

28454..29908
DNA (1455bp) protein (485aa)
Uncharacterized protein Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TIQ0_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW02903.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
anamox1_curated_scaffold_471_28
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

29921..30646
DNA (726bp) protein (242aa)
Nucleotidyltransferase family protein Tax=Niabella soli DSM 19437 RepID=H1NUU4_9SPHI
Nucleotidyltransferase {ECO:0000313|EMBL:KIC94693.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
nucleotidyltransferase
anamox1_curated_scaffold_471_29
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

30791..32752
DNA (1962bp) protein (654aa)
Aminopeptidase N-like protein Tax=Niabella soli DSM 19437 RepID=H1NUP8_9SPHI
peptidase M1
Peptidase M1 {ECO:0000313|EMBL:AHF15759.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
anamox1_curated_scaffold_471_30
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(32785..33165)
DNA (381bp) protein (127aa)
endoribonuclease L-PSP Tax=Niabella aurantiaca RepID=UPI0003785BBA
endoribonuclease L-PSP
Endoribonuclease L-PSP {ECO:0000313|EMBL:ACU58440.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
Displaying items 1-30 of 46 in total

View Taxonomy