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anamox1_curated_scaffold_544

Search features with annotation key words

Displaying items 1-30 of 38 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox1_curated_scaffold_544_1
unknown

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2..109
DNA (108bp) protein (36aa)

This feature has no annotations

anamox1_curated_scaffold_544_2
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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221..679
DNA (459bp) protein (153aa)
Restriction modification system DNA specificity domain protein Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IJ90_FLUTR
restriction modification system DNA specificity domain-containing protein
Restriction modification system DNA specificity domain protein {ECO:0000313|EMBL:AEA44960.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
anamox1_curated_scaffold_544_3
Methanococcus vannielii, Methanococcus, Methanococcales, Methanococci, Euryarchaeota, Archaea

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663..1424
DNA (762bp) protein (254aa)
Restriction modification system DNA specificity domain Tax=Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224) RepID=A6UNC2_METVS
restriction modification system DNA specificity subunit
Restriction modification system DNA specificity domain {ECO:0000313|EMBL:ABR53994.1}; species="Archaea; Euryarchaeota; Methanococci; Methanococcales; Methanococcaceae; Methanococcus.;" source="Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224).;"
anamox1_curated_scaffold_544_4
CG_CP01_01, CG_CP01, Bacteria

Not on your lists

1417..4689
DNA (3273bp) protein (1091aa)
HsdR family type I site-specific deoxyribonuclease (EC:3.1.21.3)
Type I site-specific deoxyribonuclease, HsdR family Tax=Dehalogenimonas lykanthroporepellens (strain ATCC BAA-1523 / JCM 15061 / BL-DC-9) RepID=D8K3P1_DEHLB
Tax=CG_CP01_01
anamox1_curated_scaffold_544_5
R_OP11_Levybacteria_40_15b, Levybacteria, Microgenomates, Bacteria

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4773..5093
DNA (321bp) protein (107aa)
Tax=RIFCSPHIGHO2_01_FULL_OP11_Levybacteria_40_15b_curated
anamox1_curated_scaffold_544_6
GWB2_Bacteroidetes_41_8_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5185..5517
DNA (333bp) protein (111aa)
hypothetical protein Tax=Anaerophaga thermohalophila RepID=UPI000237C652
hypothetical protein
Tax=GWB2_Bacteroidetes_41_8_curated
anamox1_curated_scaffold_544_7
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

5528..5974
DNA (447bp) protein (149aa)
hypothetical protein Tax=Niabella aurantiaca RepID=UPI0003746FA9
XRE family transcriptional regulator
Transcriptional regulator, XRE family {ECO:0000313|EMBL:ADB42716.1}; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
anamox1_curated_scaffold_544_8
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(6097..6555)
DNA (459bp) protein (153aa)
Two component transcriptional regulator, LuxR family Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T9W7_NIAKG
Putative two-component response regulator {ECO:0000313|EMBL:GAO44264.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
two component transcriptional regulator, LuxR family
anamox1_curated_scaffold_544_9
unknown

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7290..8138
DNA (849bp) protein (283aa)

This feature has no annotations

anamox1_curated_scaffold_544_10
unknown

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8149..10527
DNA (2379bp) protein (793aa)

This feature has no annotations

anamox1_curated_scaffold_544_11
unknown

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10537..11547
DNA (1011bp) protein (337aa)

This feature has no annotations

anamox1_curated_scaffold_544_12
Bacteroides intestinalis CAG:564, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11557..16788
DNA (5232bp) protein (1744aa)
Uncharacterized protein Tax=Bacteroides intestinalis CAG:564 RepID=R5MMP2_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCY86521.1}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides intestinalis CAG:564.;"
anamox1_curated_scaffold_544_13
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(16947..17372)
DNA (426bp) protein (142aa)
Uncharacterized protein Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TP80_NIAKG
Uncharacterized protein {ECO:0000313|EMBL:KIC89476.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
hypothetical protein
anamox1_curated_scaffold_544_14
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(17384..17848)
DNA (465bp) protein (155aa)
Uncharacterized protein Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TP81_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV96687.1}; Flags: Precursor;; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
anamox1_curated_scaffold_544_15
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

17971..20361
DNA (2391bp) protein (797aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI00035EC3BE
Transketolase {ECO:0000313|EMBL:KIC93196.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
transketolase
anamox1_curated_scaffold_544_16
Pseudopedobacter saltans, Pseudopedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

20438..20641
DNA (204bp) protein (68aa)
Uncharacterized protein Tax=Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) RepID=F0S5C2_PEDSD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADY52067.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pseudopedobacter.;" source="Pseudopedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 /; LMG 10337 / NBRC 100064 / NCIMB 13643) (Pedobacter saltans).;"
anamox1_curated_scaffold_544_17
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

20697..21323
DNA (627bp) protein (209aa)
Uncharacterized protein Tax=Pedobacter sp. BAL39 RepID=A6EHJ1_9SPHI
Membrane protein {ECO:0000313|EMBL:KIC89474.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
hypothetical protein
anamox1_curated_scaffold_544_18
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

21320..22114
DNA (795bp) protein (265aa)
Phenazine biosynthesis protein PhzF family Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TP83_NIAKG
phenazine biosynthesis protein PhzF family
Phenazine biosynthesis protein PhzF family {ECO:0000313|EMBL:AEV96689.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
anamox1_curated_scaffold_544_19
Microscilla marina, Microscilla, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(22158..22613)
DNA (456bp) protein (152aa)
Conserved protein YuxK Tax=Microscilla marina ATCC 23134 RepID=A1ZR04_9BACT
Conserved protein YuxK {ECO:0000313|EMBL:EAY27093.1}; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Microscilla.;" source="Microscilla marina ATCC 23134.;"
thiol-disulfide oxidoreductase DCC
anamox1_curated_scaffold_544_20
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(22610..23299)
DNA (690bp) protein (230aa)
Probable transcriptional regulatory protein NiasoDRAFT_2251 Tax=Niabella soli DSM 19437 RepID=H1NKP3_9SPHI
transcriptional regulator
Probable transcriptional regulatory protein NIASO_04310 {ECO:0000256|HAMAP-Rule:MF_00693}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
anamox1_curated_scaffold_544_21
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(23524..25095)
DNA (1572bp) protein (524aa)
Amino acid permease-associated region Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PUA7_CHIPD
amino acid permease-associated protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
anamox1_curated_scaffold_544_22
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

25209..26447
DNA (1239bp) protein (413aa)
Sodium:dicarboxylate symporter Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TP88_NIAKG
C4-dicarboxylate ABC transporter {ECO:0000313|EMBL:KIC89470.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
sodium:dicarboxylate symporter
anamox1_curated_scaffold_544_23
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

26457..27131
DNA (675bp) protein (225aa)
SNARE associated Golgi protein Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PUA9_CHIPD
hypothetical protein
SNARE associated Golgi protein {ECO:0000313|EMBL:ACU59149.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
anamox1_curated_scaffold_544_24
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

27135..28373
DNA (1239bp) protein (413aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI00036FB4B2
major facilitator superfamily protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
anamox1_curated_scaffold_544_25
unknown

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comp(28512..28622)
DNA (111bp) protein (37aa)

This feature has no annotations

anamox1_curated_scaffold_544_26
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

28973..29917
DNA (945bp) protein (315aa)
Uncharacterized protein Tax=Pedosphaera parvula Ellin514 RepID=B9XDX5_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EEF61866.1}; Flags: Precursor;; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
hypothetical protein
anamox1_curated_scaffold_544_27
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

29967..30479
DNA (513bp) protein (171aa)
Uncharacterized protein Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TL59_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW01900.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
anamox1_curated_scaffold_544_28
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

30810..32117
DNA (1308bp) protein (436aa)
Uncharacterized protein Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TGZ8_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW00609.1}; Flags: Precursor;; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
anamox1_curated_scaffold_544_29
unknown

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32200..33768
DNA (1569bp) protein (523aa)

This feature has no annotations

anamox1_curated_scaffold_544_30
unknown

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comp(33780..33992)
DNA (213bp) protein (71aa)

This feature has no annotations

Displaying items 1-30 of 38 in total

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