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anamox1_curated_scaffold_588

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Displaying items 1-30 of 43 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox1_curated_scaffold_588_trna_6
unknown

Not on your lists

comp(70..141)
DNA (72bp)
transferRNA Thr
anamox1_curated_scaffold_588_trna_5
unknown

Not on your lists

comp(232..304)
DNA (73bp)
transferRNA Gly
anamox1_curated_scaffold_588_trna_4
unknown

Not on your lists

comp(399..481)
DNA (83bp)
transferRNA Tyr
anamox1_curated_scaffold_588_trna_3
unknown

Not on your lists

comp(567..639)
DNA (73bp)
transferRNA Thr
anamox1_curated_scaffold_588_1
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(838..1137)
DNA (300bp) protein (100aa)
Sigma-54 modulation protein Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T7E8_NIAKG
Putative sigma-54 modulation protein {ECO:0000313|EMBL:GAO41189.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
sigma-54 modulation protein
anamox1_curated_scaffold_588_2
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(1292..2194)
DNA (903bp) protein (301aa)
integrase Tax=Niabella aurantiaca RepID=UPI000369FB24
integrase
Tyrosine recombinase XerC {ECO:0000256|HAMAP-Rule:MF_01808}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
anamox1_curated_scaffold_588_3
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(2258..2455)
DNA (198bp) protein (66aa)
30S ribosomal protein S21 Tax=Niabella aurantiaca RepID=UPI000368EE6D
30S ribosomal protein S21
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
anamox1_curated_scaffold_588_4
unknown

Not on your lists

2699..3853
DNA (1155bp) protein (385aa)
hypothetical protein Tax=Niabella aurantiaca RepID=UPI00036C7760
anamox1_curated_scaffold_588_5
Schleiferia thermophila, Schleiferia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

3831..4634
DNA (804bp) protein (268aa)
Uncharacterized protein Tax=Owenweeksia hongkongensis (strain DSM 17368 / JCM 12287 / NRRL B-23963) RepID=G8R837_OWEHD
Proline hydroxylase {ECO:0000313|EMBL:KFD39463.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Schleiferiaceae; Schleiferia.;" source="Schleiferia thermophila str. Yellowstone.;"
hypothetical protein
anamox1_curated_scaffold_588_6
Sporocytophaga myxococcoides, Sporocytophaga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(4657..5820)
DNA (1164bp) protein (388aa)
Acyltransferase 3 Tax=Flavobacterium columnare (strain ATCC 49512 / CIP 103533 / TG 44/87) RepID=G8XAV9_FLACA
acyltransferase 3
Uncharacterized protein {ECO:0000313|EMBL:GAL83316.1}; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Sporocytophaga.;" source="Sporocytophaga myxococcoides.;"
anamox1_curated_scaffold_588_7
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(5923..10983)
DNA (5061bp) protein (1687aa)
hypothetical protein Tax=Niabella aurantiaca RepID=UPI00035FF101
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW01193.1}; Flags: Precursor;; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
anamox1_curated_scaffold_588_8
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(11008..12123)
DNA (1116bp) protein (372aa)
hypothetical protein Tax=Niabella aurantiaca RepID=UPI00037CEB2D
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW01194.1}; Flags: Precursor;; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
anamox1_curated_scaffold_588_9
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

12265..13635
DNA (1371bp) protein (457aa)
Tyrosine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02006, ECO:0000256|SAAS:SAAS00009759}; EC=6.1.1.1 {ECO:0000256|HAMAP-Rule:MF_02006, ECO:0000256|SAAS:SAAS00105716};; Tyrosyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02006}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Tyrosine--tRNA ligase Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T7F9_NIAKG
tyrosyl-tRNA synthetase
anamox1_curated_scaffold_588_10
Lyngbya aestuarii, Lyngbya, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

13643..14284
DNA (642bp) protein (214aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI000366D354
Alpha/beta hydrolase family protein {ECO:0000313|EMBL:ERT06283.1}; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Lyngbya.;" source="Lyngbya aestuarii BL J.;"
hypothetical protein
anamox1_curated_scaffold_588_11
Hassallia byssoidea, Hassallia, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(14273..14941)
DNA (669bp) protein (223aa)
Lipolytic protein G-D-S-L family Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8EI71_RUNSL
G-D-S-L family lipolytic protein {ECO:0000313|EMBL:KIF30469.1}; species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Hassallia.;" source="Hassallia byssoidea VB512170.;"
G-D-S-L family lipolytic protein
anamox1_curated_scaffold_588_12
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(14960..16273)
DNA (1314bp) protein (438aa)
Amino acid permease-associated region Tax=Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896) RepID=D2QD34_SPILD
amino acid permease-associated protein
Amino acid permease-associated region {ECO:0000313|EMBL:ADB41040.1}; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
anamox1_curated_scaffold_588_13
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(16306..17601)
DNA (1296bp) protein (432aa)
Isopenicillin-N epimerase Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T7G0_NIAKG
Isopenicillin N epimerase homolog {ECO:0000313|EMBL:GAO41203.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
Isopenicillin-N epimerase
anamox1_curated_scaffold_588_trna_1
unknown

Not on your lists

17742..17812
DNA (71bp)
transferRNA Gln
anamox1_curated_scaffold_588_trna_2
unknown

Not on your lists

17845..17915
DNA (71bp)
transferRNA Gln
anamox1_curated_scaffold_588_14
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

17996..18670
DNA (675bp) protein (225aa)
Uncharacterized protein Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T8T1_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW01261.1}; Flags: Precursor;; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
anamox1_curated_scaffold_588_15
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(18701..19249)
DNA (549bp) protein (183aa)
hypothetical protein Tax=Niabella aurantiaca RepID=UPI00035F9B10
dTDP-4-dehydrorhamnose 3,5-epimerase {ECO:0000313|EMBL:KIC95625.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
dTDP-4-dehydrorhamnose 3,5-epimerase
anamox1_curated_scaffold_588_16
Hymenobacter sp. DG25B, Hymenobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(19251..20543)
DNA (1293bp) protein (431aa)
UDP-N-acetyl-D-galactosamine dehydrogenase Tax=Niabella aurantiaca RepID=UPI00037F4463
UDP-N-acetyl-D-galactosamine dehydrogenase
UDP-N-acetyl-D-galactosamine dehydrogenase {ECO:0000313|EMBL:AIZ62834.1}; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Hymenobacter.;" source="Hymenobacter sp. DG25B.;"
anamox1_curated_scaffold_588_17
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(20561..21544)
DNA (984bp) protein (328aa)
UDP-glucuronate decarboxylase {ECO:0000313|EMBL:AEW01265.1}; EC=4.1.1.35 {ECO:0000313|EMBL:AEW01265.1};; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
UDP-glucuronate decarboxylase Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T8T5_NIAKG
UDP-glucuronate decarboxylase
anamox1_curated_scaffold_588_18
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(21552..22862)
DNA (1311bp) protein (437aa)
Nucleotide sugar dehydrogenase Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T8T6_NIAKG
UDP-glucose 6-dehydrogenase {ECO:0000313|EMBL:KIC95622.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
nucleotide sugar dehydrogenase
anamox1_curated_scaffold_588_19
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(22870..24000)
DNA (1131bp) protein (377aa)
Glutamine--scyllo-inositol transaminase {ECO:0000313|EMBL:AEW01267.1}; EC=2.6.1.50 {ECO:0000313|EMBL:AEW01267.1};; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
hypothetical protein Tax=Segetibacter koreensis RepID=UPI00037E8453
glutamine--scyllo-inositol transaminase
anamox1_curated_scaffold_588_20
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

24093..25349
DNA (1257bp) protein (419aa)
Three-deoxy-D-manno-octulosonic-acid transferase domain-containing protein Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T8T8_NIAKG
three-deoxy-D-manno-octulosonic-acid transferase domain-containing protein
Three-deoxy-D-manno-octulosonic-acid transferase domain-containing protein {ECO:0000313|EMBL:AEW01268.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
anamox1_curated_scaffold_588_21
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(25322..26017)
DNA (696bp) protein (232aa)
Uncharacterized protein Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T8T9_NIAKG
Uncharacterized protein {ECO:0000313|EMBL:KIC95619.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
hypothetical protein
anamox1_curated_scaffold_588_22
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

26103..26675
DNA (573bp) protein (191aa)
Thymidine kinase {ECO:0000256|HAMAP-Rule:MF_00124, ECO:0000256|RuleBase:RU000544}; EC=2.7.1.21 {ECO:0000256|HAMAP-Rule:MF_00124, ECO:0000256|RuleBase:RU000544};; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
Thymidine kinase Tax=Niabella soli DSM 19437 RepID=H1NP71_9SPHI
thymidine kinase
anamox1_curated_scaffold_588_23
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

26672..27328
DNA (657bp) protein (219aa)
cytochrome C biogenesis protein Tax=Niabella aurantiaca RepID=UPI00038250DA
cytochrome C biogenesis protein
Cytochrome C biogenesis protein {ECO:0000313|EMBL:AHF15087.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
anamox1_curated_scaffold_588_24
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

27438..28133
DNA (696bp) protein (232aa)
ABC transporter permease Tax=Niabella aurantiaca RepID=UPI00035E0B69
ABC transporter permease
ABC transporter permease {ECO:0000313|EMBL:AHF15088.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
Displaying items 1-30 of 43 in total

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