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rifcsphigho2_01_scaffold_8224

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_01_scaffold_8224_1
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists

104..2149
DNA (2046bp) protein (682aa)
Rad3-related DNA helicase n=1 Tax=Methanobrevibacter ruminantium (strain ATCC 35063 / DSM 1093 / JCM 13430 / M1) RepID=D3E2S1_METRM
Marine sediment metagenome DNA, contig: S12H4_L01639 Tax=CG_Pacearch_06
rifcsphigho2_01_scaffold_8224_2
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists

2180..3220
DNA (1041bp) protein (347aa)
Putative uncharacterized protein n=1 Tax=Dictyostelium purpureum RepID=F0ZLB4_DICPU
hypothetical protein Tax=CG_Pacearch_06
hypothetical protein
rifcsphigho2_01_scaffold_8224_3
unknown

Not on your lists

comp(3168..3950)
DNA (783bp) protein (261aa)

This feature has no annotations

rifcsphigho2_01_scaffold_8224_4

Not on your lists

comp(3988..5685)
DNA (1698bp) protein (566aa)
sodium/hydrogen exchanger id=5048682 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Sodium/hydrogen exchanger {ECO:0000313|EMBL:KHO45345.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
sodium/hydrogen exchanger
rifcsphigho2_01_scaffold_8224_5
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists


5862..6170
DNA (309bp) protein (103aa)
rps10p; 30S ribosomal protein S10P; K02946 small subunit ribosomal protein S10 Tax=CG_Pacearch_06
rps10p; 30S ribosomal protein S10P; K02946 small subunit ribosomal protein S10 id=5043958 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
rps10p; 30S ribosomal protein S10P
rifcsphigho2_01_scaffold_8224_6
RIFOXYA2_FULL_OD1_Falkowbacteria_47_19_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

6222..6647
DNA (426bp) protein (142aa)
argininosuccinate lyase (EC:4.3.2.1)
NUDIX hydrolase n=1 Tax=Streptomyces sp. ACT-1 RepID=D1X5B1_9ACTO id=87432 bin=ACD58 species=Streptomyces griseus genus=Streptomyces taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=ACD58 organism_group=ACD58 (Berkelbacteria) organism_desc=ACD58
NUDIX hydrolase Tax=RIFOXYA2_FULL_OD1_Falkowbacteria_47_19_curated
rifcsphigho2_01_scaffold_8224_7

Not on your lists

comp(6649..7440)
DNA (792bp) protein (264aa)
Uncharacterized protein {ECO:0000313|EMBL:AIA15118.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
rifcsphigho2_01_scaffold_8224_8
R_OD1_Yanofskybacteria_42_49, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

comp(7437..8099)
DNA (663bp) protein (221aa)
pyrimidine 5'-nucleotidase; K07025 putative hydrolase of the HAD superfamily id=75027 bin=ACD52 species=ACD52 genus=ACD52 taxon_order=ACD52 taxon_class=ACD52 phylum=OP11 tax=ACD52 organism_group=OP11 (Microgenomates) organism_desc=OP11
transposase IS861 orfB
Tax=RIFCSPLOWO2_01_FULL_OD1_Yanofskybacteria_42_49_curated
rifcsphigho2_01_scaffold_8224_9
Desulfobacca acetoxidans, Desulfobacca, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8153..9646)
DNA (1494bp) protein (498aa)
Uncharacterized protein n=1 Tax=Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2) RepID=F2NDU1_DESAR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEB10438.1}; TaxID=880072 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Desulfobacca.;" source="Desulfobacca ace
rifcsphigho2_01_scaffold_8224_10
unknown

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comp(9796..9933)
DNA (138bp) protein (46aa)

This feature has no annotations

rifcsphigho2_01_scaffold_8224_11
CG_Pacearch_02, Pacearchaeota, Archaea

Not on your lists

comp(10182..11594)
DNA (1413bp) protein (471aa)
hypothetical protein; K14415 tRNA-splicing ligase RtcB [EC:6.5.1.3] Tax=CG_Pacearch_02
tRNA-splicing ligase RtcB id=5800748 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
hypothetical protein
rifcsphigho2_01_scaffold_8224_12
unknown

Not on your lists

11845..12060
DNA (216bp) protein (72aa)

This feature has no annotations

rifcsphigho2_01_scaffold_8224_13
unknown

Not on your lists

comp(12050..12310)
DNA (261bp) protein (87aa)

This feature has no annotations

rifcsphigho2_01_scaffold_8224_14
CG_Pacearch_02, Pacearchaeota, Archaea

Not on your lists

comp(12476..12886)
DNA (411bp) protein (137aa)
Protein archease n=1 Tax=Pyrococcus yayanosii (strain CH1 / JCM 16557) RepID=F8AH06_PYRYC
hypothetical protein Tax=CG_Pacearch_02
hypothetical protein
rifcsphigho2_01_scaffold_8224_15
CG_Pacearch_03, Pacearchaeota, Archaea

Not on your lists

12920..13837
DNA (918bp) protein (306aa)
Tax=CG_Pacearch_03
rifcsphigho2_01_scaffold_8224_16
AR13, Pacearchaeaota, DPANN, Archaea

Not on your lists

comp(13865..14923)
DNA (1059bp) protein (353aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:822 RepID=R5JAW0_9FIRM rbh
hypothetical protein Tax=AR13
hypothetical protein
rifcsphigho2_01_scaffold_8224_17
AR13, Pacearchaeaota, DPANN, Archaea

Not on your lists

comp(14926..15282)
DNA (357bp) protein (119aa)
Blue (Type 1) copper domain protein n=1 Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7E936_METEZ id=5103245 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Blue (Type 1) copper protein
Blue (Type 1) copper domain protein Tax=AR13
rifcsphigho2_01_scaffold_8224_18
CG_Pacearch_04, Pacearchaeota, Archaea

Not on your lists

comp(15290..15499)
DNA (210bp) protein (70aa)
hypothetical protein Tax=CG_Pacearch_04
id=5045705 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
rifcsphigho2_01_scaffold_8224_19
unknown

Not on your lists

15838..16128
DNA (291bp) protein (97aa)

This feature has no annotations

rifcsphigho2_01_scaffold_8224_20
AR20, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(16221..16856)
DNA (636bp) protein (212aa)
hypothetical protein
id=5103814 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Tax=AR20
rifcsphigho2_01_scaffold_8224_21
RBG_13_RIF_OD1_08_40_8_curated, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists

comp(16857..19739)
DNA (2883bp) protein (961aa)
Na-Ca exchanger/integrin-beta4 Tax=RBG_13_RIF_OD1_08_40_8_curated
rifcsphigho2_01_scaffold_8224_22
CG_Pacearch_02, Pacearchaeota, Archaea

Not on your lists

20536..21135
DNA (600bp) protein (200aa)
Transcriptional regulator n=1 Tax=sediment metagenome RepID=D9PJD3_9ZZZZ
hypothetical protein Tax=CG_Pacearch_02
hypothetical protein
rifcsphigho2_01_scaffold_8224_23
GWB1_OP11_41_5, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

21132..21551
DNA (420bp) protein (140aa)
Putative uncharacterized protein n=1 Tax=sediment metagenome RepID=D9PJD2_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:KKS13605.1}; TaxID=1618429 species="Bacteria; Microgenomates.;" source="Microgenomates (Daviesbacteria) bacterium GW2011_GWB1_41_5.;"
rifcsphigho2_01_scaffold_8224_24
GWA1_OP11_39_32_plus, Levybacteria, Microgenomates, Bacteria

Not on your lists

21694..22422
DNA (729bp) protein (243aa)
DSBA oxidoreductase n=1 Tax=Nitrosopumilus maritimus (strain SCM1) RepID=A9A5N9_NITMS id=5103511 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
DSBA oxidoreductase {ECO:0000313|EMBL:KKR15044.1}; TaxID=1618454 species="Bacteria; Microgenomates.;" source="Microgenomates (Levybacteria) bacterium GW2011_GWA1_39_32.;"
DSBA oxidoreductase
rifcsphigho2_01_scaffold_8224_25
R_Peregrinibacteria_39_12, Peregrinibacteria, Bacteria

Not on your lists

comp(22437..23546)
DNA (1110bp) protein (370aa)
putative Dihydroorotate dehydrogenase (EC:1.3.98.1) Tax=RIFCSPLOWO2_01_FULL_Peregrinibacteria_39_12_curated
Dihydroorotate dehydrogenase 2 n=1 Tax=uncultured bacterium RepID=K2B509_9BACT
Dihydroorotate dehydrogenase 2
rifcsphigho2_01_scaffold_8224_26
unknown

Not on your lists

23762..24097
DNA (336bp) protein (112aa)

This feature has no annotations

Displaying 26 items

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