Alias: CARSLU_10
name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
CARSLU_4_1
Staphylococcus lugdunensis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria
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Not on your lists |
comp(357..815)
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hypothetical protein
hypothetical protein
Protein sprT-like n=2 Tax=Staphylococcus lugdunensis RepID=D3QIM8_STALH (db=UNIREF evalue=1.0e-83 bit_score=311.0 identity=99.34 coverage=98.6928104575163)
no description (db=HMMSmart db_id=SM00731 from=4 to=147 evalue=2.2e-54 interpro_id=IPR006640 interpro_description=Domain of unknown function SprT-like)
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CARSLU_4_2
Staphylococcus lugdunensis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria
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Not on your lists |
comp(808..2958)
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S1 RNA binding domain-containing protein
S1 RNA binding domain-containing protein
S1 RNA-binding domain-containing transcription accessory protein n=2 Tax=Staphylococcus lugdunensis RepID=D3QIM7_STALH (db=UNIREF evalue=0.0 bit_score=1353.0 identity=99.72 coverage=99.721059972106)
seg (db=Seg db_id=seg from=192 to=201)
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CARSLU_4_3
Staphylococcus lugdunensis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria
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Not on your lists |
comp(3077..3847)
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sigB; RNA polymerase sigma-B factor
sigB; RNA polymerase sigma-B factor
RNA polymerase sigma factor n=110 Tax=Staphylococcus RepID=Q5HMF1_STAEQ (db=UNIREF evalue=4.0e-129 bit_score=464.0 identity=92.19 coverage=99.2217898832685)
seg (db=Seg db_id=seg from=143 to=156)
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CARSLU_4_4
Staphylococcus lugdunensis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria
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Not on your lists |
comp(3822..4301)
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Serine-protein kinase rsbW n=2 Tax=Staphylococcus lugdunensis RepID=D3QIM5_STALH (db=UNIREF evalue=2.0e-87 bit_score=324.0 identity=100.0 coverage=98.75)
serine-protein kinase rsbW (EC:2.7.11.1)
serine-protein kinase rsbW (EC:2.7.11.1)
RsbW_low_gc (db=HMMTigr db_id=TIGR01924 from=2 to=153 evalue=3.49999999999995e-73 interpro_id=IPR010193 interpro_description=Anti-sigma B factor GO=Molecular Function: protein serine/threonine kinase activity (GO:0004674), Molecular Function: ATP binding (GO:0005524), Biological Process: protein phosphorylation (GO:0006468), Molecular Function: sigma factor antagonist activity (GO:0016989), Biological Process: negative regulation of transcription, DNA-dependent (GO:0045892))
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CARSLU_4_5
Staphylococcus lugdunensis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria
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Not on your lists |
comp(4303..4629)
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rsbV; anti-sigma B factor antagonist
ant_ant_sig: anti-anti-sigma factor (db=HMMTigr db_id=TIGR00377 from=1 to=107 evalue=4.7e-30 interpro_id=IPR003658 interpro_description=Anti-sigma factor antagonist GO=Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: antisigma factor binding (GO:0045152))
Anti-sigma factor antagonist SpoIIaa (db=superfamily db_id=SSF52091 from=3 to=101 evalue=3.6e-24 interpro_id=IPR002645 interpro_description=Sulphate transporter/antisigma-factor antagonist STAS)
no description (db=Gene3D db_id=G3DSA:3.30.750.24 from=2 to=106 evalue=5.4e-23 interpro_id=IPR002645 interpro_description=Sulphate transporter/antisigma-factor antagonist STAS)
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CARSLU_4_6
Staphylococcus lugdunensis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria
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Not on your lists |
comp(4720..5721)
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Serine phosphatase RsbU, regulator of sigma subunit n=2 Tax=Staphylococcus lugdunensis RepID=D3QIM3_STALH (db=UNIREF evalue=0.0 bit_score=682.0 identity=99.7 coverage=99.4011976047904)
rsbU; putative sigma factor sigB regulation protein
rsbU; putative sigma factor sigB regulation protein
no description (db=HMMSmart db_id=SM00331 from=116 to=331 evalue=8.9e-71 interpro_id=IPR001932 interpro_description=Protein phosphatase 2C-like GO=Molecular Function: catalytic activity (GO:0003824))
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CARSLU_4_7
Staphylococcus lugdunensis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria
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Not on your lists |
comp(6155..6505)
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hypothetical protein
mRNA interferase MazF n=11 Tax=Staphylococcus epidermidis RepID=MAZF_STAEQ (db=UNIREF evalue=7.0e-55 bit_score=216.0 identity=93.91 coverage=97.4358974358974)
no description (db=Gene3D db_id=G3DSA:2.30.30.110 from=2 to=115 evalue=5.2e-38 interpro_id=IPR011067 interpro_description=Plasmid maintenance toxin/Cell growth inhibitor)
Cell growth inhibitor/plasmid maintenance toxic component (db=superfamily db_id=SSF50118 from=1 to=115 evalue=2.6e-37 interpro_id=IPR011067 interpro_description=Plasmid maintenance toxin/Cell growth inhibitor)
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CARSLU_4_8
Staphylococcus lugdunensis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria
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Not on your lists |
comp(6502..6672)
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hypothetical protein
Antitoxin MazE n=4 Tax=Staphylococcus RepID=MAZE_STAHJ (db=UNIREF evalue=2.0e-22 bit_score=107.0 identity=91.07 coverage=96.4912280701754)
Toxin-antitoxin system, antitoxin component, ribbon-helix-helix domain protein {ECO:0000313|EMBL:EFU82999.1}; TaxID=525377 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source=
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CARSLU_4_9
Staphylococcus lugdunensis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria
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Not on your lists |
comp(6759..7907)
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Alanine racemase n=2 Tax=Staphylococcus lugdunensis RepID=D3QIM1_STALH (db=UNIREF evalue=0.0 bit_score=787.0 identity=99.21 coverage=99.4778067885117)
alanine racemase (EC:5.1.1.1)
rbh
alanine racemase (EC:5.1.1.1)
rbh
ALANINE_RACEMASE (db=PatternScan db_id=PS00395 from=37 to=46 evalue=0.0 interpro_id=IPR020622 interpro_description=Alanine racemase, pyridoxal-phosphate attachment site GO=Biological Process: alanine metabolic process (GO:0006522), Molecular Function: alanine racemase activity (GO:0008784))
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CARSLU_4_10
Staphylococcus lugdunensis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria
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Not on your lists |
comp(7955..8347)
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Holo-[acyl-carrier-protein] synthase n=2 Tax=Staphylococcus lugdunensis RepID=D3QIM0_STALH (db=UNIREF evalue=5.0e-72 bit_score=273.0 identity=100.0 coverage=98.4732824427481)
acpS; holo-(acyl-carrier-protein) synthase (EC:2.7.8.7)
ACPS_STAAC_Q5HED0; (db=BlastProDom db_id=PD004282 from=8 to=115 evalue=2.0e-41 interpro_id=IPR004568 interpro_description=Phosphopantethiene-protein transferase GO=Molecular Function: magnesium ion binding (GO:0000287), Biological Process: fatty acid biosynthetic process (GO:0006633), Molecular Function: holo-[acyl-carrier-protein] synthase activity (GO:0008897))
4'-phosphopantetheinyl transferase (db=superfamily db_id=SSF56214 from=1 to=116 evalue=3.2e-31 interpro_id=IPR008278 interpro_description=4'-phosphopantetheinyl transferase GO=Molecular Function: magnesium ion binding (GO:0000287), Molecular Function: holo-[acyl-carrier-protein] synthase activity (GO:0008897), Biological Process: macromolecule biosynthetic process (GO:0009059))
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CARSLU_4_11
Staphylococcus lugdunensis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria
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Not on your lists |
comp(8359..8871)
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hypothetical protein
seg (db=Seg db_id=seg from=17 to=36)
transmembrane_regions (db=TMHMM db_id=tmhmm from=84 to=106)
seg (db=Seg db_id=seg from=55 to=67)
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CARSLU_4_12
Staphylococcus lugdunensis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria
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Not on your lists |
comp(8858..10372)
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Putative uncharacterized protein n=2 Tax=Staphylococcus lugdunensis RepID=D3QIL8_STALH (db=UNIREF evalue=0.0 bit_score=990.0 identity=99.4 coverage=99.6039603960396)
hypothetical protein
rbh
hypothetical protein
rbh
transmembrane_regions (db=TMHMM db_id=tmhmm from=369 to=391)
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CARSLU_4_13
Staphylococcus lugdunensis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria
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Not on your lists |
comp(10365..10847)
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hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=51 to=73)
transmembrane_regions (db=TMHMM db_id=tmhmm from=19 to=41)
seg (db=Seg db_id=seg from=114 to=123)
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CARSLU_4_14
Staphylococcus lugdunensis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria
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Not on your lists |
comp(11172..12686)
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putative helicase
putative helicase
seg (db=Seg db_id=seg from=44 to=57)
DEAD_ATP_HELICASE (db=PatternScan db_id=PS00039 from=148 to=156 evalue=0.0 interpro_id=IPR000629 interpro_description=RNA helicase, ATP-dependent, DEAD-box, conserved site GO=Molecular Function: nucleic acid binding (GO:0003676), Molecular Function: ATP binding (GO:0005524), Molecular Function: ATP-dependent helicase activity (GO:0008026))
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CARSLU_4_15
Staphylococcus lugdunensis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria
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Not on your lists |
comp(12922..14280)
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UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase n=2 Tax=Staphylococcus lugdunensis RepID=D3QIL5_STALH (db=UNIREF evalue=0.0 bit_score=924.0 identity=99.56 coverage=99.5584988962472)
UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate-D-alanyl-D-alanine ligase (EC:6.3.2.10)
UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate-D-alanyl-D-alanine ligase (EC:6.3.2.10)
murF: UDP-N-acetylmuramoyl-tripeptide--D-ala (db=HMMTigr db_id=TIGR01143 from=31 to=451 evalue=1.5e-154 interpro_id=IPR005863 interpro_description=UDP-MurNAc-pentapeptide synthetase GO=Molecular Function: ATP binding (GO:0005524), Cellular Component: cytoplasm (GO:0005737), Biological Process: regulation of cell shape (GO:0008360), Molecular Function: UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate-D-alanyl-D-alanine ligase activity (GO:0008766), Biological Process: cell division (GO:0051301))
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CARSLU_4_16
Staphylococcus lugdunensis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria
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Not on your lists |
comp(14298..15368)
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D-alanine--D-alanine ligase n=2 Tax=Staphylococcus lugdunensis RepID=D3QIL4_STALH (db=UNIREF evalue=0.0 bit_score=729.0 identity=100.0 coverage=99.4397759103641)
D-alanine--D-alanine ligase (EC:6.3.2.4)
D-alanine--D-alanine ligase (EC:6.3.2.4)
DALA_DALA_LIGASE_2 (db=PatternScan db_id=PS00844 from=284 to=312 evalue=0.0 interpro_id=IPR000291 interpro_description=D-alanine--D-alanine ligase/VANA/B/C, conserved site)
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CARSLU_4_17
Staphylococcus lugdunensis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria
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Not on your lists |
16361..16945
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cell division protein FtsW
Cell division protein FtsW n=2 Tax=Staphylococcus lugdunensis RepID=D3QIL3_STALH (db=UNIREF evalue=9.0e-82 bit_score=306.0 identity=100.0 coverage=92.3076923076923)
seg (db=Seg db_id=seg from=2 to=13)
transmembrane_regions (db=TMHMM db_id=tmhmm from=160 to=182)
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CARSLU_4_18
Staphylococcus lugdunensis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria
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Not on your lists |
comp(17369..17506)
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hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFU83009.1}; TaxID=525377 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus lugdunensis M23590.;"
Uncharacterized protein n=5 Tax=Staphylococcus lugdunensis RepID=K8N2Q1_STALU
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CARSLU_4_19
Staphylococcus lugdunensis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria
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Not on your lists |
comp(17848..18141)
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hypothetical protein
DUF156 (db=HMMPfam db_id=PF02583 from=14 to=94 evalue=3.0e-27 interpro_id=IPR003735 interpro_description=Protein of unknown function DUF156)
Uncharacterized protein {ECO:0000313|EMBL:EFU83011.1}; TaxID=525377 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus lugdunensis M23590.;"
Uncharacterized protein n=5 Tax=Staphylococcus lugdunensis RepID=K8N4H5_STALU
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CARSLU_4_20
Staphylococcus lugdunensis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria
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Not on your lists |
19001..19801
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Cardiolipin synthase 1 n=2 Tax=Staphylococcus lugdunensis RepID=D3QIK9_STALH (db=UNIREF evalue=7.0e-155 bit_score=550.0 identity=100.0 coverage=99.250936329588)
Cardiolipin synthetase
Phospholipase D/nuclease (db=superfamily db_id=SSF56024 from=53 to=253 evalue=2.3e-57)
no description (db=Gene3D db_id=G3DSA:3.30.870.10 from=100 to=244 evalue=6.2e-33)
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CARSLU_4_21
Staphylococcus lugdunensis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria
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Not on your lists |
19923..20564
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Metal-dependent phosphohydrolase n=2 Tax=Staphylococcus lugdunensis RepID=D3QIK8_STALH (db=UNIREF evalue=9.0e-122 bit_score=439.0 identity=99.53 coverage=99.0654205607477)
hypothetical protein
rbh
hypothetical protein
rbh
HD-domain/PDEase-like (db=superfamily db_id=SSF109604 from=14 to=145 evalue=7.4e-10)
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CARSLU_4_22
Staphylococcus lugdunensis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria
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Not on your lists |
comp(20911..21786)
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hypothetical protein
hypothetical protein
Membrane protein oxaA n=2 Tax=Staphylococcus lugdunensis RepID=D3QIK7_STALH (db=UNIREF evalue=2.0e-158 bit_score=561.0 identity=100.0 coverage=96.9178082191781)
seg (db=Seg db_id=seg from=60 to=72)
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CARSLU_4_23
Staphylococcus lugdunensis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria
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Not on your lists |
comp(21876..22514)
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Thiamine-phosphate pyrophosphorylase n=2 Tax=Staphylococcus lugdunensis RepID=D3QIK6_STALH (db=UNIREF evalue=2.0e-119 bit_score=431.0 identity=99.53 coverage=99.0610328638498)
thiE; putative thiamine-phosphate pyrophosphorylase (EC:2.5.1.3)
rbh
thiE; putative thiamine-phosphate pyrophosphorylase (EC:2.5.1.3)
rbh
Aldolase_TIM (db=Gene3D db_id=G3DSA:3.20.20.70 from=3 to=209 evalue=1.69999999999998e-67 interpro_id=IPR013785 interpro_description=Aldolase-type TIM barrel GO=Molecular Function: catalytic activity (GO:0003824))
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CARSLU_4_24
Staphylococcus lugdunensis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria
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Not on your lists |
comp(22517..23305)
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thiM; putative hydroxyethylthiazole kinase (EC:2.7.1.50)
thiM; putative hydroxyethylthiazole kinase (EC:2.7.1.50)
Hydroxyethylthiazole kinase n=2 Tax=Staphylococcus lugdunensis RepID=D3QIK5_STALH (db=UNIREF evalue=5.0e-141 bit_score=503.0 identity=99.62 coverage=99.2395437262358)
seg (db=Seg db_id=seg from=35 to=48)
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CARSLU_4_25
Staphylococcus lugdunensis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria
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Not on your lists |
comp(23298..24119)
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Phosphomethylpyrimidine kinase n=2 Tax=Staphylococcus lugdunensis RepID=D3QIK4_STALH (db=UNIREF evalue=2.0e-158 bit_score=561.0 identity=100.0 coverage=99.2700729927007)
thiD; putative phosphomethylpyrimidine kinase (EC:2.7.4.7)
rbh
thiD; putative phosphomethylpyrimidine kinase (EC:2.7.4.7)
rbh
HMP-P_kinase: phosphomethylpyrimidine ki (db=HMMTigr db_id=TIGR00097 from=7 to=262 evalue=1.7e-111 interpro_id=IPR004399 interpro_description=Phosphomethylpyrimidine kinase type-2 GO=Molecular Function: phosphomethylpyrimidine kinase activity (GO:0008972), Biological Process: thiamine biosynthetic process (GO:0009228))
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CARSLU_4_26
Staphylococcus lugdunensis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria
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Not on your lists |
comp(24124..24801)
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thiaminase II (EC:3.5.99.2)
thiaminase II (EC:3.5.99.2)
Thiaminase II n=2 Tax=Staphylococcus lugdunensis RepID=D3QIK3_STALH (db=UNIREF evalue=4.0e-122 bit_score=440.0 identity=99.56 coverage=99.1150442477876)
seg (db=Seg db_id=seg from=127 to=135)
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CARSLU_4_27
Staphylococcus lugdunensis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria
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Not on your lists |
comp(25214..25921)
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transglycosylase
transglycosylase
SceD-like transglycosylase, biomarker for vancomycin-intermediate strains n=2 Tax=Staphylococcus lugdunensis RepID=D3QIK2_STALH (db=UNIREF evalue=9.0e-85 bit_score=316.0 identity=99.15 coverage=99.1525423728814)
seg (db=Seg db_id=seg from=105 to=156)
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CARSLU_4_28
Staphylococcus lugdunensis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria
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Not on your lists |
27029..27481
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YwpF protein n=2 Tax=Staphylococcus lugdunensis RepID=E6MD18_STALU (db=UNIREF evalue=8.0e-83 bit_score=308.0 identity=99.33 coverage=98.6754966887417)
hypothetical protein
hypothetical protein
YwpF protein {ECO:0000313|EMBL:EFU83021.1}; TaxID=525377 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus lugdunensis M23590.;"
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hello
Andrea Singh
(11/17/12)
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CARSLU_4_29
Staphylococcus lugdunensis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria
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Not on your lists |
comp(27878..28318)
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fabZ; putative hydroxymyristoyl-(acyl carrier protein)dehydratase (EC:4.2.1.-)
fabZ; putative hydroxymyristoyl-(acyl carrier protein)dehydratase (EC:4.2.1.-)
fabZ: beta-hydroxyacyl-(acyl-carrier-protein (db=HMMTigr db_id=TIGR01750 from=5 to=142 evalue=2.0e-75 interpro_id=IPR010084 interpro_description=Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO=Cellular Component: cytoplasm (GO:0005737), Biological Process: fatty acid biosynthetic process (GO:0006633), Molecular Function: hydro-lyase activity (GO:0016836))
no description (db=Gene3D db_id=G3DSA:3.10.129.10 from=6 to=142 evalue=1.2e-47)
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CARSLU_4_30
Staphylococcus lugdunensis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria
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Not on your lists |
comp(28355..29620)
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murA1; putative UDP-N-acetylglucosamine1-carboxyvinyltransferase (EC:2.5.1.7)
murA1; putative UDP-N-acetylglucosamine1-carboxyvinyltransferase (EC:2.5.1.7)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase 2 n=2 Tax=Staphylococcus lugdunensis RepID=D3QIJ8_STALH (db=UNIREF evalue=0.0 bit_score=811.0 identity=100.0 coverage=99.5260663507109)
seg (db=Seg db_id=seg from=370 to=386)
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