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CARPRO_15

Search features with annotation key words

Displaying items 1-30 of 38 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
CARPRO_15_1
Propionibacterium sp. KPL1852, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(628..795)
DNA (168bp) protein (56aa)
hypothetical protein
Putative uncharacterized protein n=1 Tax=Propionibacterium acnes SK137 RepID=D4H9K3_PROAS (db=UNIREF evalue=2.0e-13 bit_score=78.6 identity=85.71 coverage=73.2142857142857)
seg (db=Seg db_id=seg from=43 to=55)
Uncharacterized protein {ECO:0000313|EMBL:ERS68600.1}; TaxID=1203576 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium sp. KP
CARPRO_15_2
Propionibacterium sp. KPL2005, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

960..2165
DNA (1206bp) protein (402aa)
hypothetical protein
hypothetical protein
Putative uncharacterized protein n=63 Tax=Propionibacterium RepID=D4H9K5_PROAS (db=UNIREF evalue=0.0 bit_score=660.0 identity=86.28 coverage=99.5024875621891)
seg (db=Seg db_id=seg from=307 to=318)
CARPRO_15_3
Propionibacterium sp. KPL1852, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3308..6574
DNA (3267bp) protein (1089aa)
ileS; isoleucyl-tRNA ligase (EC:6.1.1.5) rbh
ileS; isoleucyl-tRNA ligase (EC:6.1.1.5) rbh
Isoleucyl-tRNA synthetase n=30 Tax=Bacteria RepID=SYI_PROAC (db=UNIREF evalue=0.0 bit_score=1932.0 identity=87.97 coverage=99.8163452708907)
seg (db=Seg db_id=seg from=786 to=799)
CARPRO_15_4
Propionibacterium sp. KPL2005, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6654..7676)
DNA (1023bp) protein (341aa)
trans-1,2-dihydrobenzene-1,2-diol dehydrogenase
trans-1,2-dihydrobenzene-1,2-diol dehydrogenase
Oxidoreductase, NAD-binding domain protein n=61 Tax=Propionibacterium RepID=D4H9L1_PROAS (db=UNIREF evalue=5.0e-146 bit_score=521.0 identity=87.46 coverage=93.2551319648094)
seg (db=Seg db_id=seg from=108 to=125)
CARPRO_15_5
Propionibacterium sp. KPL1852, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7747..8088
DNA (342bp) protein (114aa)
putative regulatory protein
seg (db=Seg db_id=seg from=78 to=88)
(db=HMMPfam db_id=PF02467 from=23 to=84 evalue=1.0e-17 interpro_id=IPR003482 interpro_description=Transcription factor WhiB)
Transcriptional regulator WhiB {ECO:0000256|HAMAP-Rule:MF_01479}; TaxID=1203576 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacte
CARPRO_15_6
Propionibacterium sp. KPL1838, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8085..8258
DNA (174bp) protein (58aa)
hypothetical protein
Putative uncharacterized protein n=4 Tax=Propionibacterium RepID=E4AIH8_PROAA (db=UNIREF evalue=3.0e-25 bit_score=117.0 identity=96.49 coverage=96.551724137931)
Uncharacterized protein {ECO:0000313|EMBL:ERS40687.1}; TaxID=1203572 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium sp. KP
CARPRO_15_7
Propionibacterium sp. KPL1852, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8255..8710
DNA (456bp) protein (152aa)
endoribonuclease L-PSP
Endoribonuclease L-PSP n=74 Tax=Propionibacterium RepID=D4H9L4_PROAS (db=UNIREF evalue=6.0e-49 bit_score=196.0 identity=93.38 coverage=98.6842105263158)
seg (db=Seg db_id=seg from=65 to=87)
seg (db=Seg db_id=seg from=89 to=97)
CARPRO_15_8
Propionibacterium sp. KPL1838, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8812..9513)
DNA (702bp) protein (234aa)
putative transcriptional regulator
putative transcriptional regulator
Transcriptional regulator, Crp/Fnr family n=73 Tax=Propionibacterium RepID=D4H9L5_PROAS (db=UNIREF evalue=2.0e-117 bit_score=424.0 identity=93.13 coverage=99.1452991452991)
cAMP-binding domain-like (db=superfamily db_id=SSF51206 from=5 to=139 evalue=2.4e-26 interpro_id=IPR018490 interpro_description=Cyclic nucleotide-binding-like)
CARPRO_15_9
Propionibacterium avidum, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9651..10364
DNA (714bp) protein (238aa)
endonuclease III rbh
endonuclease III rbh
Endonuclease III n=63 Tax=Propionibacterium acnes RepID=E4A4U9_PROAA (db=UNIREF evalue=5.0e-109 bit_score=397.0 identity=85.09 coverage=95.3781512605042)
ENDONUCLEASE_III_1 (db=PatternScan db_id=PS00764 from=199 to=215 evalue=0.0 interpro_id=IPR004035 interpro_description=Endonuclease III, iron-sulphur binding site GO=Molecular Function: endonuclease activity (GO:0004519), Biological Process: DNA repair (GO:0006281))
CARPRO_15_10
Propionibacterium sp. KPL1852, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10361..10948
DNA (588bp) protein (196aa)
hypothetical protein rbh
hypothetical protein rbh
Antioxidant, AhpC/TSA family n=9 Tax=Propionibacterium acnes RepID=E4AIH4_PROAA (db=UNIREF evalue=5.0e-88 bit_score=326.0 identity=78.76 coverage=97.9591836734694)
Thioredoxin-like (db=superfamily db_id=SSF52833 from=1 to=192 evalue=3.5e-31 interpro_id=IPR012336 interpro_description=Thioredoxin-like fold)
CARPRO_15_11
Propionibacterium sp. KPL1838, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10945..11601
DNA (657bp) protein (219aa)
NUDIX family hydrolase
NUDIX family hydrolase
Hydrolase, NUDIX family n=66 Tax=Propionibacterium RepID=D4H9L8_PROAS (db=UNIREF evalue=1.0e-97 bit_score=359.0 identity=89.45 coverage=99.0867579908676)
NUDIX (db=ProfileScan db_id=PS51462 from=26 to=164 evalue=0.0 interpro_id=IPR000086 interpro_description=NUDIX hydrolase domain GO=Molecular Function: hydrolase activity (GO:0016787))
CARPRO_15_12
unknown

Not on your lists

11828..12436
DNA (609bp) protein (203aa)
seg (db=Seg db_id=seg from=6 to=19)
seg (db=Seg db_id=seg from=23 to=57)
CARPRO_15_13
Propionibacterium sp. HGH0353, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12391..13659)
DNA (1269bp) protein (423aa)
Na+/H+ antiporter NhaA rbh
Na+/H+ antiporter NhaA rbh
Na(+)/H(+) antiporter nhaA n=73 Tax=Propionibacterium RepID=NHAA_PROAC (db=UNIREF evalue=0.0 bit_score=692.0 identity=90.48 coverage=99.0543735224586)
transmembrane_regions (db=TMHMM db_id=tmhmm from=268 to=287)
CARPRO_15_14
Propionibacterium sp. HGH0353, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13827..14585)
DNA (759bp) protein (253aa)
methyltransferase
methyltransferase
Methyltransferase domain protein n=8 Tax=Propionibacterium RepID=D4H9M1_PROAS (db=UNIREF evalue=1.0e-121 bit_score=439.0 identity=84.92 coverage=99.2094861660079)
S-adenosyl-L-methionine-dependent methyltransferases (db=superfamily db_id=SSF53335 from=36 to=143 evalue=1.5e-11)
CARPRO_15_15
Propionibacterium sp. HGH0353, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14713..15771
DNA (1059bp) protein (353aa)
hypothetical protein
hypothetical protein
CpaE-like protein n=69 Tax=Propionibacterium RepID=D4H9M2_PROAS (db=UNIREF evalue=5.0e-86 bit_score=321.0 identity=84.78 coverage=77.9036827195467)
seg (db=Seg db_id=seg from=223 to=237)
CARPRO_15_16
Propionibacterium sp. HGH0353, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15768..16934
DNA (1167bp) protein (389aa)
putative secretory protein
putative secretory protein
Helicase/secretion neighborhood ATPase n=73 Tax=Propionibacterium RepID=D4H9M3_PROAS (db=UNIREF evalue=3.0e-165 bit_score=585.0 identity=90.96 coverage=99.2287917737789)
seg (db=Seg db_id=seg from=303 to=314)
CARPRO_15_17
Propionibacterium sp. HGH0353, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16931..17701
DNA (771bp) protein (257aa)
hypothetical protein
hypothetical protein
Putative uncharacterized protein n=67 Tax=Propionibacterium RepID=D4H9M4_PROAS (db=UNIREF evalue=1.0e-90 bit_score=336.0 identity=80.47 coverage=99.2217898832685)
seg (db=Seg db_id=seg from=154 to=166)
CARPRO_15_18
Propionibacterium sp. HGH0353, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17698..18447
DNA (750bp) protein (250aa)
type II secretion system F domain protein
seg (db=Seg db_id=seg from=193 to=209)
seg (db=Seg db_id=seg from=101 to=110)
transmembrane_regions (db=TMHMM db_id=tmhmm from=10 to=29)
CARPRO_15_19
Propionibacterium avidum, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18645..18932
DNA (288bp) protein (96aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EGY77748.1}; TaxID=997355 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium avidum
CARPRO_15_20
Propionibacterium sp. KPL1852, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18929..19339
DNA (411bp) protein (137aa)
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=38 to=60)
seg (db=Seg db_id=seg from=13 to=31)
Uncharacterized protein {ECO:0000313|EMBL:ERS68621.1}; TaxID=1203576 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium sp. KP
CARPRO_15_21
Propionibacterium sp. KPL1838, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19336..19740
DNA (405bp) protein (135aa)
TadE-like protein
TadE-like protein n=69 Tax=Propionibacterium RepID=D4H9M8_PROAS (db=UNIREF evalue=1.0e-41 bit_score=172.0 identity=64.18 coverage=98.5185185185185)
transmembrane_regions (db=TMHMM db_id=tmhmm from=20 to=42)
tadE_like_DECH: helicase/secretion nei (db=HMMTigr db_id=TIGR03816 from=18 to=132 evalue=6.5e-39 interpro_id=IPR021202 interpro_description=Helicase/secretion neighbourhood TadE-like protein)
CARPRO_15_22
Propionibacterium avidum, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20041..22197)
DNA (2157bp) protein (719aa)
DEAD/DEAH box helicase
DEAD/DEAH box helicase
Helicase C-terminal domain protein (Fragment) n=74 Tax=Propionibacterium RepID=F5TW52_9ACTO (db=UNIREF evalue=0.0 bit_score=848.0 identity=90.36 coverage=66.2030598052851)
seg (db=Seg db_id=seg from=650 to=662)
CARPRO_15_23
Propionibacterium sp. HGH0353, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22692..23912
DNA (1221bp) protein (407aa)
transferase
transferase
Methyltransferase, HemK family n=72 Tax=Propionibacterium RepID=D4H9N1_PROAS (db=UNIREF evalue=0.0 bit_score=739.0 identity=89.16 coverage=99.5085995085995)
N6_MTASE (db=PatternScan db_id=PS00092 from=134 to=140 evalue=0.0 interpro_id=IPR002052 interpro_description=DNA methylase, N-6 adenine-specific, conserved site GO=Molecular Function: nucleic acid binding (GO:0003676), Molecular Function: methyltransferase activity (GO:0008168), Biological Process: methylation (GO:0032259))
CARPRO_15_24
Propionibacterium sp. KPL1838, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24013..24303
DNA (291bp) protein (97aa)
hypothetical protein
Conserved domain protein n=4 Tax=Propionibacterium RepID=E4AIF6_PROAA (db=UNIREF evalue=7.0e-45 bit_score=182.0 identity=91.67 coverage=97.9381443298969)
(db=HMMPfam db_id=PF10006 from=27 to=94 evalue=1.3e-25 interpro_id=IPR018720 interpro_description=Domain of unknown function DUF2249)
Uncharacterized protein {ECO:0000313|EMBL:ERS40667.1}; TaxID=1203572 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium sp. KP
CARPRO_15_25
Propionibacterium sp. KPL2005, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24542..27328
DNA (2787bp) protein (929aa)
DNA topoisomerase I
DNA topoisomerase I
DNA topoisomerase n=73 Tax=Propionibacterium RepID=D4H9N3_PROAS (db=UNIREF evalue=0.0 bit_score=1567.0 identity=92.53 coverage=94.7255113024758)
seg (db=Seg db_id=seg from=632 to=643)
CARPRO_15_26
Propionibacterium sp. KPL1838, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27330..28817
DNA (1488bp) protein (496aa)
hypothetical protein rbh
hypothetical protein rbh
Putative uncharacterized protein n=69 Tax=Propionibacterium RepID=D4H9N4_PROAS (db=UNIREF evalue=0.0 bit_score=823.0 identity=84.04 coverage=99.5967741935484)
Uncharacterized protein n=3 Tax=Propionibacterium avidum RepID=M9VD32_9ACTO
CARPRO_15_27
Propionibacterium sp. KPL2005, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28810..29457
DNA (648bp) protein (216aa)
putative thymidylate kinase rbh
Thymidylate kinase n=4 Tax=Propionibacterium RepID=E4AIF3_PROAA (db=UNIREF evalue=7.0e-87 bit_score=323.0 identity=80.0 coverage=99.0740740740741)
seg (db=Seg db_id=seg from=138 to=150)
THYMIDYLATE_KINASE (db=PatternScan db_id=PS01331 from=104 to=116 evalue=0.0 interpro_id=IPR018095 interpro_description=Thymidylate kinase, conserved site GO=Molecular Function: thymidylate kinase activity (GO:0004798), Molecular Function: ATP binding (GO:0005524), Biological Process: dTDP biosynthetic process (GO:0006233))
CARPRO_15_28
Propionibacterium sp. KPL1852, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29491..30747
DNA (1257bp) protein (419aa)
DNA polymerase III subunit delta' rbh
DNA polymerase III subunit delta' rbh
DNA polymerase III, delta' subunit n=73 Tax=Propionibacterium RepID=D4H9N6_PROAS (db=UNIREF evalue=0.0 bit_score=638.0 identity=94.0 coverage=95.2267303102625)
seg (db=Seg db_id=seg from=215 to=231)
CARPRO_15_29
Propionibacterium avidum, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

30852..31658
DNA (807bp) protein (269aa)
hypothetical protein
hypothetical protein
DoxX protein n=33 Tax=Propionibacterium RepID=E4AIF1_PROAA (db=UNIREF evalue=2.0e-83 bit_score=312.0 identity=90.91 coverage=92.9368029739777)
seg (db=Seg db_id=seg from=252 to=266)
CARPRO_15_30
Propionibacterium sp. KPL2005, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

31796..32488
DNA (693bp) protein (231aa)
hypothetical protein
seg (db=Seg db_id=seg from=33 to=49)
seg (db=Seg db_id=seg from=128 to=133)
RIBOSOMAL LARGE SUBUNIT PSEUDOURIDINE SYNTHASE B-RELATED (db=HMMPanther db_id=PTHR21600:SF3 from=48 to=192 evalue=1.1e-32)
Displaying items 1-30 of 38 in total

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