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RIFCSPHIGHO2_01_FULL_OD1_45_28_rifcsphigho2_01_scaffold_32645

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPHIGHO2_01_FULL_OD1_45_28_rifcsphigho2_01_scaffold_32645_1
R_OD1_45_48, Parcubacteria, Bacteria

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1..81
DNA (81bp) protein (27aa)
hypothetical protein Tax=RIFCSPLOWO2_01_FULL_OD1_45_48_curated
RIFCSPHIGHO2_01_FULL_OD1_45_28_rifcsphigho2_01_scaffold_32645_2
R_OD1_45_48, Parcubacteria, Bacteria

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125..514
DNA (390bp) protein (130aa)
hypothetical protein; K07460 putative endonuclease Tax=RIFCSPLOWO2_01_FULL_OD1_45_48_curated
UPF0102 protein HMPREF0072_1985 id=4209728 bin=GWF2_Planctomycetes_42_9 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=GWF2_Planctomycetes_42_9 organism_group=Planctomycetes
hypothetical protein
RIFCSPHIGHO2_01_FULL_OD1_45_28_rifcsphigho2_01_scaffold_32645_3
R_OD1_45_48, Parcubacteria, Bacteria

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1691..2263
DNA (573bp) protein (191aa)
RNA polymerase sigma factor SigW Tax=RIFCSPLOWO2_01_FULL_OD1_45_48_curated
RNA polymerase, sigma-24 subunit, ECF subfamily protein id=3736405 bin=GWC2_OD1_43_27 species=Flavobacterium sp. CF136 genus=Flavobacterium taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete)
RNA polymerase sigma factor SigW
RIFCSPHIGHO2_01_FULL_OD1_45_28_rifcsphigho2_01_scaffold_32645_4
R_OD1_45_48, Parcubacteria, Bacteria

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2268..2627
DNA (360bp) protein (120aa)
Tax=RIFCSPLOWO2_01_FULL_OD1_45_48_curated
RIFCSPHIGHO2_01_FULL_OD1_45_28_rifcsphigho2_01_scaffold_32645_5
R_OD1_45_48, Parcubacteria, Bacteria

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2802..3908
DNA (1107bp) protein (369aa)
peptidase M42 family protein; K01179 endoglucanase [EC:3.2.1.4] Tax=RIFCSPLOWO2_01_FULL_OD1_45_48_curated
Peptidase M42 family protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XJQ9_9BACT
peptidase M42 family protein
RIFCSPHIGHO2_01_FULL_OD1_45_28_rifcsphigho2_01_scaffold_32645_6
R_OD1_45_48, Parcubacteria, Bacteria

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comp(3952..4215)
DNA (264bp) protein (88aa)
Uncharacterized protein n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PY42_9BACT
hupA; histone-like protein; K03530 DNA-binding protein HU-beta Tax=RIFCSPLOWO2_01_FULL_OD1_45_48_curated
hupA; transcriptional regulator HU alpha subunit
RIFCSPHIGHO2_01_FULL_OD1_45_28_rifcsphigho2_01_scaffold_32645_7
R_OD1_45_48, Parcubacteria, Bacteria

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comp(4304..5833)
DNA (1530bp) protein (510aa)
HDIG/KH domain-containing protein; K06950 uncharacterized protein Tax=RIFCSPLOWO2_01_FULL_OD1_45_48_curated
id=5227366 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
HDIG/KH domain-containing protein
RIFCSPHIGHO2_01_FULL_OD1_45_28_rifcsphigho2_01_scaffold_32645_8
R_OD1_45_48, Parcubacteria, Bacteria

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5935..7512
DNA (1578bp) protein (526aa)
2,3-bisphosphoglycerate-independent phosphoglycerate mutase (EC:5.4.2.1) Tax=RIFCSPLOWO2_01_FULL_OD1_45_48_curated
2,3-bisphosphoglycerate-independent phosphoglycerate mutase (EC:5.4.2.1)
2,3-bisphosphoglycerate-independent phosphoglycerate mutase id=3736606 bin=GWC2_OD1_43_27 species=ACD7 genus=ACD7 taxon_order=ACD7 taxon_class=ACD7 phylum=OD1-i tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete)
RIFCSPHIGHO2_01_FULL_OD1_45_28_rifcsphigho2_01_scaffold_32645_9
R_OD1_45_48, Parcubacteria, Bacteria

Not on your lists

7582..8496
DNA (915bp) protein (305aa)
putative M24B family peptidase; K01262 Xaa-Pro aminopeptidase [EC:3.4.11.9] Tax=RIFCSPLOWO2_01_FULL_OD1_45_48_curated
Xaa-Pro aminopeptidase id=2619693 bin=GWC1_KAZAN_52_13 species=GWC1_KAZAN_52_13 genus=GWC1_KAZAN_52_13 taxon_order=GWC1_KAZAN_52_13 taxon_class=GWC1_KAZAN_52_13 phylum=KAZAN tax=GWC1_KAZAN_52_13 organism_group=Kazan
putative M24B family peptidase
Displaying 9 items

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