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RIFCSPHIGHO2_01_FULL_OD1_45_28_rifcsphigho2_01_scaffold_9758_15

Organism: Candidatus Niyogibacteria bacterium RIFCSPHIGHO2_01_FULL_45_28

partial RP 38 / 55 BSCG 38 / 51 ASCG 9 / 38
Location: 16511..19726

Top 3 Functional Annotations

Value Algorithm Source
rpoB; DNA-directed RNA polymerase subunit beta (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 56.5
  • Coverage: 999.99
  • Bit_score: 1178
  • Evalue 0.0
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA010-E09 RepID=UPI00037C611A similarity UNIREF
DB: UNIREF100
  • Identity: 67.2
  • Coverage: 999.99
  • Bit_score: 1450
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta {ECO:0000313|EMBL:KKS47966.1}; TaxID=1618659 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWF2_42_19.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 71.1
  • Coverage: 999.99
  • Bit_score: 1544
  • Evalue 0.0

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Taxonomy

GWF2_OD1_42_19 → Giovannonibacteria → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 3216
ATGGAAAAAAAATATTTTTCTGCCTATAAGCCTCCGTTAGTTGACTTTCCCGCTCTGGCTTCGCCGCAACTGGACTCGTTTCGCTGGTTTTTGGACGAAGGTCTAAAAGAGCTTTTTAAAGAATTTTCGCCGATAGAAGATTATACCGCCAAAGAATTGTCTTTGGAGTTTTCCGGTTTTTATTTTGACGAACCCAAATGCGACGAGTATCACGCCAAAACCCATAATTTATCATACGAAGCTCCGCTGCGCATACGCGCCAAACTGATCAACAAACGGACCAAAGAAATAAAAGAGCAGGAAATATTTTTAACCGACATGCCGATGATGACCCCGCGCGGAACTTTCATCGTCAACGGCGTCGAGCGCGTGGTAGTGTCACTGCTTGCGAGATCGTTCGGCCTTTATTTTACTGCCAATGTTTACGGCGCGCGCAAGAATTTCGGAGCGAAAATAATTCCGTCCAGAGGGGTCTGGCTTGAAATCGAAACCGAATCGGACAACGCGATTTACGTCCGGATAGATCGCAAAAGAAAAATAGCCGTCACTGCTCTTTTAAGGATGCTCGGAATGTCCGATGACGAGCAGATAAAAAAAGCCTTCAGTTCGGTTGACAACTCGGACGTGTCCTATATTTCACGGACTCTCGAAAAAGATTCAACCCATAGTTCGGAGGAAGCCTTCGTGGAAATATACAAGCGCCTAAGACCCGGGGAGCTTGCCACCATTGATACGGCCCGCGATCTTCTGGAGGGCGTTTTTTCCTCGGAACGCTACGATTTGTCTGTCGTTGGACGAAAGAAAATGAACTCCAGACTGGGTATTACGGACAAAGAGCGCGCGGATTCCCGCACGCTTTCTGTGGAGGACCTGGTTGGTATTCTATCGCAGGTTATAAAGATGAATAACGATCCGTCGGCCGTTCCTGACGATATCGATCACCTTGGCAACAGAAGGCTTCGCGGAGTGGGCGAAATGCTCCAAAACAAATTACGCGTGGGAATGATGAGAATGAGACGCACGATTCAAGATAGAATGTCCACCTTGGATATAAACACGCTTACGCCGGCCCAGCTGATCAACTCGAGGCCGTTCACGGTGTCGGTCAAAGAGTTTTTCACGACCTCCCAGCTTTCGCAGTATATGCGTCAGGAAAATATTTTGACTGAGCTCGAGCACTTGCGGCGTCTCACGGCCATGGGCCCCGGAGGGCTCACAAAAGAACGCGCCGGTTTTGAAGTGAGGGACGTTCACCCGTCTCACTACGGAAGAATATGTCCGATTCAGACTCCGGAAGGTCCGAACATAGGATTAGTGGTGCATCTTTCAAGTTTTACGCGCATAAACGACTTGGGCATACTTGAAACTCCCTACATTAAAGTCAAAAAAGGAGTTTTGACCAAGGAAGTTGTTTATTTGAACGCTTTTGACGAGGTTAAATACAACATTGCTTCGTCCACGGCGAAGTACGATGACAATGGAGTTATTCTTGAAGATGACGTTGAGGCGAGAGTTGAAAGTTATCCCACAATTATAAAGCGCGAAGCGGTGGATTTTATAGACGTTTCGCCCACTCAAGCCTTCAGTGTTTCAACGAGCCTTATTCCTTTTTTGGACCACGATGATGCCAATCGCGCGATGATGGGTTCGAATATGCAGCGCCAAGCCGTGCCCTGTATACAGCCGCACGCGCCGCTGGTTGCGACCGGAATTGAGGGAAGGGCCGCCCGAGATTCCGGCAGGCTTACGATTTCCGAAGAAGACGGCGTAATCAAGAAGGTTGACGCCGCGGCAATAACGGTTAAATCAGGCAAAAAAGAAAAAACATACAAACTTATAAATTATCTGCGTTCGAACGATTTTACCGCCATAACCCAAAGGCCCATCGTAAATGTCGGCGACAAGGTCAAAAAAGGCGACGTTTTATCCGACGTTTCGTCGTCGGATAACGGCCAGCTGGCTTTGGGTCAAAATGTTTTAGTGGCCTTTCTTTCCTGGGGAGGAGCAAATTTCGAAGACGCGGTAATAATTTCGGAAAAACTTGTCCAGAGGGACATTTTTACTTCGATTCACATAATGGATTTCTCGGTAGCGGTCAGGGACACCAAGCTTGGGCCGGAAATAACCACTTACGACATTCCGAATGTCGGAGAGGATAAATTAAAAGATTTGGACGAAGAGGGGATTGTGCGCATAGGCGCCGAGATTGCGGCCGGAGACATTTTGGTCGGAAAAATCACACCCAAAGGAGAGGCCGACCTTACTCCGGAAGAAAGGCTTTTAAGGGCGATTTTCGGAGAAAAAGCCCGGGAGGTAAAAGACACTTCGCTTCGCATGCCGCACGGCCGAAAAGGCAGGGTGGTTGGGGTTAAAATATTCTCCCGCGAAAAAGGCGATCCGCTTGAAACCGGAATAATCAAAAAAGTCCAGATAGAAATTGCCGAAATAAGGAAAATTTCTATTGGCGACAAACTTGCCGGACGACACGGCAACAAAGGTGTTATATCAAAGATACTTCCGGTTGAAGATATGCCTTATTTAGAGGACGGCACTCCTGTAGACATCGTTTTGAATCCGCTGGGTGTTGCCGGACGAATGAATGTGGGCCAAATTATGGAAACCCATCTTGGCTGGGCGGCCGAAAAATTGGGTTATCAGGCGATAACCCCGGCTTTTAGGGGGGCGACCGAAGAAGAGATAAGGGGAGAGCTTAAAAAAGCGGGTATTCCGACCTCCGGAAAGGTCAGAATGTTTGACGGGCGCAGCGGTGAATCTTTTGATCAGCCGGTTACCGTCGGGCAAATTTATATGATGAAACTAAATCACATGGTTGAGGACAAAATCCACATGCGCTCAACCGGGCCCTACTCCCTGATTACGCAGCAGCCTCTGGGCGGGAAGGCACAGGGAGGAGGACAGCGTTTCGGCGAGATGGAGGTGTGGGCTCTGGAAGGTTATGGCGCGGCGAATGTGCTCCAGGAAATGCTGACCATAAAATCCGATGACGTTCTGGGCAGATCAGCCGCTTATGATGCGATAGTTAGGGGCGATCCGTTTAAGACCCCTAATGTTCCGGCGTCTTTTCATGTGCTCCTAAACGAACTCAGGGGTCTGGCTTTGGATATAGATTTGGTTGGGCTTAAGACTGAACCCGGTTTCTCCGAAGACCAGCGACGTAACACGGATTTTAGCAGCGTACAGGCGAAAGAATTTTAG
PROTEIN sequence
Length: 1072
MEKKYFSAYKPPLVDFPALASPQLDSFRWFLDEGLKELFKEFSPIEDYTAKELSLEFSGFYFDEPKCDEYHAKTHNLSYEAPLRIRAKLINKRTKEIKEQEIFLTDMPMMTPRGTFIVNGVERVVVSLLARSFGLYFTANVYGARKNFGAKIIPSRGVWLEIETESDNAIYVRIDRKRKIAVTALLRMLGMSDDEQIKKAFSSVDNSDVSYISRTLEKDSTHSSEEAFVEIYKRLRPGELATIDTARDLLEGVFSSERYDLSVVGRKKMNSRLGITDKERADSRTLSVEDLVGILSQVIKMNNDPSAVPDDIDHLGNRRLRGVGEMLQNKLRVGMMRMRRTIQDRMSTLDINTLTPAQLINSRPFTVSVKEFFTTSQLSQYMRQENILTELEHLRRLTAMGPGGLTKERAGFEVRDVHPSHYGRICPIQTPEGPNIGLVVHLSSFTRINDLGILETPYIKVKKGVLTKEVVYLNAFDEVKYNIASSTAKYDDNGVILEDDVEARVESYPTIIKREAVDFIDVSPTQAFSVSTSLIPFLDHDDANRAMMGSNMQRQAVPCIQPHAPLVATGIEGRAARDSGRLTISEEDGVIKKVDAAAITVKSGKKEKTYKLINYLRSNDFTAITQRPIVNVGDKVKKGDVLSDVSSSDNGQLALGQNVLVAFLSWGGANFEDAVIISEKLVQRDIFTSIHIMDFSVAVRDTKLGPEITTYDIPNVGEDKLKDLDEEGIVRIGAEIAAGDILVGKITPKGEADLTPEERLLRAIFGEKAREVKDTSLRMPHGRKGRVVGVKIFSREKGDPLETGIIKKVQIEIAEIRKISIGDKLAGRHGNKGVISKILPVEDMPYLEDGTPVDIVLNPLGVAGRMNVGQIMETHLGWAAEKLGYQAITPAFRGATEEEIRGELKKAGIPTSGKVRMFDGRSGESFDQPVTVGQIYMMKLNHMVEDKIHMRSTGPYSLITQQPLGGKAQGGGQRFGEMEVWALEGYGAANVLQEMLTIKSDDVLGRSAAYDAIVRGDPFKTPNVPASFHVLLNELRGLALDIDLVGLKTEPGFSEDQRRNTDFSSVQAKEF*