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RIFCSPHIGHO2_01_FULL_OD1_45_28_rifcsphigho2_01_scaffold_9758_16

Organism: Candidatus Niyogibacteria bacterium RIFCSPHIGHO2_01_FULL_45_28

partial RP 38 / 55 BSCG 38 / 51 ASCG 9 / 38
Location: 19744..23406

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase, beta'' subunit, predominant form; K03046 DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] Tax=RIFCSPLOWO2_01_FULL_OD1_45_48_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 999.99
  • Bit_score: 2399
  • Evalue 0.0
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA010-E09 RepID=UPI00037A4755 similarity UNIREF
DB: UNIREF100
  • Identity: 57.3
  • Coverage: 999.99
  • Bit_score: 1393
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta'' similarity KEGG
DB: KEGG
  • Identity: 49.9
  • Coverage: 999.99
  • Bit_score: 1117
  • Evalue 0.0

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Taxonomy

R_OD1_45_48 → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 3663
ATGGAAACAAAGGCAACGGATTTCCAATCAATAATCATTAAAGTGGCTTCGCCCGAAAAAATTCTTTCGTGGTCCAGAGGCGAGGTTACCAAACCGGAAACAATCAACTACCGGACACAGCGGGCAGAAAAAGACGGTCTTTTTGATGAGCGTATTTTCGGTCCGGAAAAAGATTACGAGTGTTACTGCGGAAAATACCGCAGGGTTCGCTATAAAGGAATTATATGCGACAAGTGCGGCGTGGAAGTCACCCGGTCCATAGTCAGAAGGGAGAGGATGGGCCATATTTCTTTGGCCACCCCCGCGGCCCATATTTGGTTTTTACGCGGAGTGCCGTCAAGAATCGGGATTCTTTTCGATTTAACTCTGCCGGATTTGGAAAAAGTAATTTATTTCGCAAGCTACATTACAATCAAGGTTGACGAAGAATCCAGGGCCCAAAAATTGAACGAACTTGACAAAGAATACAAACAGAAATCAAAAACCGTAACCAAGCGGGATGAAACTGCGCGTCTTAAAGACGCCTATGAGCGCACAAAGTCCGAGCTCGAAAATCTAAGACCGCTCCAGATTTTGTCCGAAGTCGAATATCACCGCTTGAGCCTGAAATACGGGGACTTGTTTGAGGCAGGCATAGGAGCAGAGGCTTTGTATCGCTTGGCCAAGGACATGGATTTGGGGCGCACAAAAGCGGAGCTGGAAAAAGATTTCGAAGAAAGCGATTTACCGGCCAAGCGCAAAATCGCAAGACGCCTGGCTCTCATCAAAAACATGCTTCGTTCGGGCATCCGTCCGGAATGGATGTTTCTAACGGTAATTCCGGTCACGCCTCCGGCTTTGCGTCCCATGGTTCCGCTGGACGGCGGAAGGCACGCAACTTCCGACGTGAACGACTTATACCGCAGGGTTATTAACCGCAACAACCGTCTGAAAAAACTTCTTGAACTTTCGGCTCCGGAAGTTATTGTCCGCAACGAAAAAAGAATGCTGCAAGAGGCCGTTGACGCGCTTTTCGATAACAGCATACGCAGGGGTCATTCGGCGGCGACCAGTCAGGCTCAAAAAAGAGCTTTGAAATCACTGGCCGACACCTTAAGAGGCAAACAGGGCAGATTCAGGCAAAACCTTCTGGGTAAGCGCGTGGATTATTCCGGAAGATCGGTAATTGTTGTGGGTCCCGAACTCAAGCTTCACCAGTGCGGCTTGCCGAAACACATGGCTCTTGAACTTTTCAGGCCGTTCGTTATTTCAAAACTTATTATTAACGGACTTGCCCATAATATCCGCGGGGCCAACAGGATGATAGATGAGCCTACTCCGGATGTCTGGTCTGCGCTTGAGGAAGTCATAAAAAACAAACTTGTTTTGCTTAACCGTGCGCCGACTCTGCACCGTTTGGGTATTCAGGCCTTTCAGCCGGTGCTTATCGAGGGGAATGCCATACAGGTTCATCCGCTGGTGTGCCCGGCTTATAACGCGGATTTTGACGGCGACCAAATGGCCGTTCATGTTCCGCTCGGCATTGAGGCACAGAAAGAGGCCGAAGAGCTTATGTGGTCGGTGCGCAACTTGACCAAACCTGGAAGCGGGGAGCCGATAGTCAATCCTACACAAGACATGGTTCTGGGAATATATTGGCTTACCAAAATCTTACCTCAAGCCAAAGGCGAAGCCGGTATATTCTCAAGCCCGAACGAAGCCATTTTGGCCCATGAGTTCGGAGTTGTTGATTTGAGGGCTAAGGTAAAAGTGGCGGTTACCGATACGCCTAAATATAAGAGCGCCGTCGGAGAAGGGGGCGGATTTTTCGAGACTTCCGTCGGCAGGCTTTTGTTTAACAGCGCTTTGCCGGACAACTTCTCTTTTATCAACCGGGAAATAGGGAAAAAAGATCTGGGACAGATTGTGAGTCTGCTTATAGCCCATTACGGGCGCGAAGCGCTGCCGGCTATTTTGGATAAAATTAAAAATTTTGGCTTCAAATATGCCACCGTGTCCGGTGTGTCTTGGGGCATGAACGACTTGATCGTTCCGGAGGAAAAACAAGACATAATAAACGAAGCGCTGGTTCAAGAAAAAAAAGTTTACGAACAGTTTAATGACGGCCTTCTGACTCACGAAGACCGGTATAAAAAAATAGTCGAGATTTGGAATGGGGTCATGCAAAGGGTTAACGAACTGGTTCCCAAAACGCTGGACAGTCTCGGTCCTGTTCACACCATGGTTTCCTCCGCCGCTCGGGGTACCTGGGCTCAGATAGCGCAGATGGCCGGAATGAAGGGGCTCGTCAGAAACCCGGCCGGACGCGTCATAGAGCTTCCGATAATTTCCAATTACAAGGAAGGCCTGGGGGTGCTTGAGTATTTTATTGCTACTCACGGCGCAAGAAAAGGAACGGCGGATACCGCCCTTAAAACATCCGTCGCCGGCCACTTGACTCGCAGGCTTGTTGATGTTGCTCAGGATATGATAGTCAGTATTAAAGACTGCAAAGATTCATCCGGCCTGAAAGTAACCCGCAAAGACGCTGACGACTATGGCCGCGGTTTTGCCAACCGTGTATTTGGAAGAGTCCTTGCGCGTGAAGCCAAAGACAAACACGGAAAAACTCTTTTCAAAAAAGGACACCTTCTGACTTTTGACGACGCCGATTTGATGGAGCGTTCGGAGATAGACGAGGCATATTTGCGAAGCCCCCTGACTTGTAAAGCTCCCCGCGGGATTTGCCAGCAATGTTACGGCTATGATCTGGGCACAAACGAAATAGTTAAACTCGGCGAAGCGGTCGGCATAGTTGCGGCCCAGGCCATAGGCGAGCCGGGGACTCAGCTTACCATGAGGACATTCCATACCGGAGGCGTTGCGACCGGAGGGGATATAACGCTTGGTCTCCCGAGAGTTGAAGAGCTTTTTGAGATGCGTTCTCCCGCAAATCCGGCGATATTGTCGGAGTGTAACGGAACGGTTATTGATATTACAGAAGATGGGCGGGACAAAATTTTAAAAATACTGATTGACCAGGCGCAAAAAACAAAGATCAAAAAGGAAGAAACTAAAGAATACCGGGTGCCGTTCGGACGCGCGATGATTGTAGAAAAAGGCTCAAACGTAAAACGCGGGTCCAAGCTCTCCGACGGTTCGGTTGATCTTAGAGAGCTGTTTGATTTGGCCGGCGAAACCGAAGCCCAGAACTACATAATAAACGGAATATCTTATATCTATGCTTCGCAAGGAAGCTCGACGAACTTCAAGCATATGGAGCTGATTGTCCGTCAGATCTTTTCGCGCGTAAAAATTACCGACTCCGGAGATACCAACCTTTCTGTTGGCGCAGTAACGGAAAGAGCCGAGCTTGTGGAAGAAAATAAAAAATTGGGCAAAAAAGGAAATCCGGCCAAAGCGGAAACCCATCCTTTAGGCATAACCCGCGCATCGCTGGCCAGCTCAAGTTTTCTGGCCGCCGCTTCTTTTCAGGAAACAACCCGTGTTTTAATTTCGGCTGCTCTTGAAGGCAAGGAAGACAAACTAAGAGGCCTTAAAGAAAATGTAATAATCGGGCGCATAATTCCCGCAGGCACCGGATTTCATCAGGATACTGGCGTCTCCGATTCGCAGGAAGAAGTTTTTGAAGAGGAGGCGGTGGAGGCCGAAGCCGAGAAATGA
PROTEIN sequence
Length: 1221
METKATDFQSIIIKVASPEKILSWSRGEVTKPETINYRTQRAEKDGLFDERIFGPEKDYECYCGKYRRVRYKGIICDKCGVEVTRSIVRRERMGHISLATPAAHIWFLRGVPSRIGILFDLTLPDLEKVIYFASYITIKVDEESRAQKLNELDKEYKQKSKTVTKRDETARLKDAYERTKSELENLRPLQILSEVEYHRLSLKYGDLFEAGIGAEALYRLAKDMDLGRTKAELEKDFEESDLPAKRKIARRLALIKNMLRSGIRPEWMFLTVIPVTPPALRPMVPLDGGRHATSDVNDLYRRVINRNNRLKKLLELSAPEVIVRNEKRMLQEAVDALFDNSIRRGHSAATSQAQKRALKSLADTLRGKQGRFRQNLLGKRVDYSGRSVIVVGPELKLHQCGLPKHMALELFRPFVISKLIINGLAHNIRGANRMIDEPTPDVWSALEEVIKNKLVLLNRAPTLHRLGIQAFQPVLIEGNAIQVHPLVCPAYNADFDGDQMAVHVPLGIEAQKEAEELMWSVRNLTKPGSGEPIVNPTQDMVLGIYWLTKILPQAKGEAGIFSSPNEAILAHEFGVVDLRAKVKVAVTDTPKYKSAVGEGGGFFETSVGRLLFNSALPDNFSFINREIGKKDLGQIVSLLIAHYGREALPAILDKIKNFGFKYATVSGVSWGMNDLIVPEEKQDIINEALVQEKKVYEQFNDGLLTHEDRYKKIVEIWNGVMQRVNELVPKTLDSLGPVHTMVSSAARGTWAQIAQMAGMKGLVRNPAGRVIELPIISNYKEGLGVLEYFIATHGARKGTADTALKTSVAGHLTRRLVDVAQDMIVSIKDCKDSSGLKVTRKDADDYGRGFANRVFGRVLAREAKDKHGKTLFKKGHLLTFDDADLMERSEIDEAYLRSPLTCKAPRGICQQCYGYDLGTNEIVKLGEAVGIVAAQAIGEPGTQLTMRTFHTGGVATGGDITLGLPRVEELFEMRSPANPAILSECNGTVIDITEDGRDKILKILIDQAQKTKIKKEETKEYRVPFGRAMIVEKGSNVKRGSKLSDGSVDLRELFDLAGETEAQNYIINGISYIYASQGSSTNFKHMELIVRQIFSRVKITDSGDTNLSVGAVTERAELVEENKKLGKKGNPAKAETHPLGITRASLASSSFLAAASFQETTRVLISAALEGKEDKLRGLKENVIIGRIIPAGTGFHQDTGVSDSQEEVFEEEAVEAEAEK*