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gwf1_scaffold_8031

Alias: WS6_GWF1_33_233_25

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Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
gwf1_scaffold_8031_1
WS6_GWF1_33_233, WS6, Bacteria

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comp(3..1067)
DNA (1065bp) protein (355aa)
DNA repair protein radA n=30 Tax=Xanthomonadaceae RepID=B2STM0_XANOP
Repair protein RadA, DNA repair protein RadA/Sms protein {ECO:0000313|EMBL:KKP43970.1}; Flags: Fragment;; TaxID=1619096 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bact
DNA repair protein RadA
seg (db=Seg db_id=seg from=303 to=313)
gwf1_scaffold_8031_2
WS6_GWC1_33_20, WS6, Bacteria

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comp(1084..2274)
DNA (1191bp) protein (397aa)
ATPase AAA-2 domain protein n=1 Tax=Alkaliphilus oremlandii (strain OhILAs) RepID=A8MLV1_ALKOO rbh
ATPase AAA-2 domain-containing protein, ATP-dependent Clp protease ATP-binding subunit ClpC {ECO:0000313|EMBL:KKP42936.1}; TaxID=1619089 species="Bacteria; candidate division WS6.;" source="candidate
ATPase
seg (db=Seg db_id=seg from=18 to=48)
gwf1_scaffold_8031_3
WS6_GWF1_33_233, WS6, Bacteria

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comp(2294..3403)
DNA (1110bp) protein (370aa)
Negative regulator of genetic competence clpC/mecB n=1 Tax=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) RepID=Q3A9N1_CARHZ
ATPase AAA-2 domain-containing protein, ATP-dependent Clp protease ATP-binding subunit ClpC {ECO:0000313|EMBL:KKP43972.1}; TaxID=1619096 species="Bacteria; candidate division WS6.;" source="candidate
ATPase
(db=HMMPfam db_id=PF02861 from=27 to=70 evalue=2.0e-06 interpro_id=IPR004176 interpro_description=Clp, N-terminal GO=Biological Process: protein metabolic process (GO:0019538))
gwf1_scaffold_8031_4
WS6_GWF1_33_233, WS6, Bacteria

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comp(3464..4696)
DNA (1233bp) protein (411aa)
RNA binding S1 domain protein n=2 Tax=Roseiflexus RepID=A7NKT3_ROSCS
RNA-binding S1 domain-containing protein, small subunit ribosomal protein S1 {ECO:0000313|EMBL:KKP43973.1}; TaxID=1619096 species="Bacteria; candidate division WS6.;" source="candidate division WS6 ba
RNA-binding S1 domain-containing protein
seg (db=Seg db_id=seg from=3 to=15)
gwf1_scaffold_8031_5
WS6_GWC1_33_20, WS6, Bacteria

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comp(4800..5396)
DNA (597bp) protein (199aa)
Endonuclease III, endonuclease III {ECO:0000313|EMBL:KKP42938.1}; EC=4.2.99.18 {ECO:0000313|EMBL:KKP42938.1};; TaxID=1619089 species="Bacteria; candidate division WS6.;" source="candidate division WS6
Endonuclease III n=3 Tax=Enterobacteriaceae RepID=G3F9Q5_ECOLX
Putative endonuclease III
ENDONUCLEASE_III_2 (db=PatternScan db_id=PS01155 from=104 to=133 evalue=0.0 interpro_id=IPR004036 interpro_description=Endonuclease III, conserved site-2 GO=Molecular Function: endonuclease activity (GO:0004519), Biological Process: DNA repair (GO:0006281))
gwf1_scaffold_8031_6
WS6_GWF1_33_233, WS6, Bacteria

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comp(5389..6405)
DNA (1017bp) protein (339aa)
Uncharacterized protein {ECO:0000313|EMBL:KKP43975.1}; Flags: Fragment;; TaxID=1619096 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWF1_33_233.;"
seg (db=Seg db_id=seg from=65 to=79)
no description (db=Gene3D db_id=G3DSA:3.40.50.300 from=10 to=112 evalue=0.00023)
(db=HMMPfam db_id=PF02223 from=13 to=111 evalue=1.2e-07 interpro_id=IPR018094 interpro_description=Thymidylate kinase GO=Molecular Function: thymidylate kinase activity (GO:0004798), Molecular Function: ATP binding (GO:0005524), Biological Process: dTDP biosynthetic process (GO:0006233))
Displaying 6 items

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