Alias: RAAC4_OD1
name | lists | location/seqs | annotations | notes |
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RAAC4_OD1_1_59
Parcubacteria bacterium RAAC4_OD1_1, Parcubacteria, Bacteria
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Not on your lists |
76853..80026
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DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase su
rpoB; DNA-directed RNA polymerase subunit beta (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta n=1 Tax=Moorella thermoacetica (strain ATCC 39073) RepID=RPOB_MOOTA
rbh
seg (db=Seg db_id=seg from=758 to=769)
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RAAC4_OD1_1_60
Parcubacteria bacterium RAAC4_OD1_1, Parcubacteria, Bacteria
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Not on your lists |
80047..83673
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DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase
DNA-directed RNA polymerase subunit beta' n=1 Tax=Kitasatospora setae (strain ATCC 33774 / DSM 43861 / JCM 3304 / KCC A-0304 / NBRC 14216 / KM-6054) RepID=E4NCS8_KITSK
rbh
DNA-directed RNA polymerase subunit beta'
seg (db=Seg db_id=seg from=165 to=179)
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RAAC4_OD1_1_61
Parcubacteria bacterium RAAC4_OD1_1, Parcubacteria, Bacteria
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Not on your lists |
83697..85349
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DNA primase {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811}; EC=2.7.7.- {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811};; TaxID=1394712 species="Bacteria; Parcubacter
dnaG; DNA primase DnaG (EC:2.7.7.-)
DNA primase n=5 Tax=Streptococcus RepID=M4YXS3_STREQ
rbh
seg (db=Seg db_id=seg from=525 to=538)
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RAAC4_OD1_1_62
Parcubacteria bacterium RAAC4_OD1_1, Parcubacteria, Bacteria
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Not on your lists |
85489..86499
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RNA polymerase sigma factor n=7 Tax=Clostridium RepID=G8LWP4_CLOCD (db=UNIREF evalue=1.4e-95 bit_score=355.5 identity=57.1 coverage=99.10979228486647)
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=1394712 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium RAAC4_OD1_1.;"
RNA polymerase, sigma 38 subunit, RpoS
ccl:Clocl_2118 RNA polymerase, sigma 38 subunit, RpoS; K03086 RNA polymerase primary sigma factor alias=RAAC4_OD1_62,RAAC4_OD1_C00001G00062 id=5227550 tax=RAAC4_OD1 species=unknown genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes
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RAAC4_OD1_1_63
Parcubacteria bacterium RAAC4_OD1_1, Parcubacteria, Bacteria
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Not on your lists |
86571..88295
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Uncharacterized protein {ECO:0000313|EMBL:ETB63612.1}; TaxID=1394712 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium RAAC4_OD1_1.;"
seg (db=Seg db_id=seg from=121 to=136)
coiled-coil (db=Coil db_id=coil from=250 to=271 evalue=NA)
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RAAC4_OD1_1_64
Parcubacteria bacterium RAAC4_OD1_1, Parcubacteria, Bacteria
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Not on your lists |
comp(88440..89153)
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Periplasmic thiol:disulfide interchange protein DsbA n=2 Tax=sulfur-oxidizing symbionts RepID=G2DGS1_9GAMM
Periplasmic thiol:disulfide interchange protein DsbA {ECO:0000313|EMBL:ETB63613.1}; TaxID=1394712 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium RAAC4_OD1_1.;"
protein-disulfide isomerase
transmembrane_regions (db=TMHMM db_id=tmhmm from=10 to=32)
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RAAC4_OD1_1_65
Parcubacteria bacterium RAAC4_OD1_1, Parcubacteria, Bacteria
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Not on your lists |
89220..90491
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Glycosyltransferase involved in cell wall biogenesis n=1 Tax=Candidatus Nanosalinarum sp. J07AB56 RepID=G0QBB2_9EURY
Glycosyltransferase involved in cell wall biogenesis {ECO:0000313|EMBL:ETB63614.1}; TaxID=1394712 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium RAAC4_OD1_1.;"
Glycosyltransferase involved in cell wall biogenesis
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=27)
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RAAC4_OD1_1_T68
unknown
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Not on your lists |
comp(91301..91373)
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transferRNA
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RAAC4_OD1_1_66
Parcubacteria bacterium RAAC4_OD1_1, Parcubacteria, Bacteria
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Not on your lists |
90504..91205
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Uncharacterized protein {ECO:0000313|EMBL:ETB63615.1}; TaxID=1394712 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium RAAC4_OD1_1.;"
transmembrane_regions (db=TMHMM db_id=tmhmm from=12 to=34)
seg (db=Seg db_id=seg from=218 to=231)
coiled-coil (db=Coil db_id=coil from=204 to=225 evalue=NA)
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RAAC4_OD1_1_67
Parcubacteria bacterium RAAC4_OD1_1, Parcubacteria, Bacteria
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Not on your lists |
comp(91445..91846)
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Uncharacterized protein {ECO:0000313|EMBL:ETB63616.1}; TaxID=1394712 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium RAAC4_OD1_1.;"
transmembrane_regions (db=TMHMM db_id=tmhmm from=2 to=24)
seg (db=Seg db_id=seg from=78 to=92)
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RAAC4_OD1_1_68
Parcubacteria bacterium RAAC4_OD1_1, Parcubacteria, Bacteria
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Not on your lists |
comp(91856..92638)
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Elongation factor Ts n=1 Tax=Reinekea blandensis MED297 RepID=A4BCF8_9GAMM
Elongation factor Ts {ECO:0000256|HAMAP-Rule:MF_00050}; Short=EF-Ts {ECO:0000256|HAMAP-Rule:MF_00050};; TaxID=1394712 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium RAAC4_OD1_1.;"
tsf; protein chain elongation factor EF-Ts
no description (db=Gene3D db_id=G3DSA:1.10.8.30 from=3 to=56 evalue=1.9e-13)
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RAAC4_OD1_1_69
Parcubacteria bacterium RAAC4_OD1_1, Parcubacteria, Bacteria
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Not on your lists |
comp(92670..93368)
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30S ribosomal protein S2 n=1 Tax=Thermotoga thermarum DSM 5069 RepID=F7YYS5_9THEM
30S ribosomal protein S2 {ECO:0000256|HAMAP-Rule:MF_00291}; TaxID=1394712 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium RAAC4_OD1_1.;"
30S ribosomal protein S2P
RIBOSOMAL_S2_2 (db=PatternScan db_id=PS00963 from=160 to=184 evalue=0.0 interpro_id=IPR018130 interpro_description=Ribosomal protein S2, conserved site GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
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RAAC4_OD1_1_70
Parcubacteria bacterium RAAC4_OD1_1, Parcubacteria, Bacteria
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Not on your lists |
93566..94828
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Proline--tRNA ligase {ECO:0000256|SAAS:SAAS00089874}; EC=6.1.1.15 {ECO:0000256|SAAS:SAAS00089874};; TaxID=1394712 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium RAAC4_OD1_1.;"
Prolyl-tRNA synthetase n=1 Tax=Haloplasma contractile SSD-17B RepID=F7PY27_9BACT
Prolyl-tRNA synthetase
seg (db=Seg db_id=seg from=391 to=406)
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RAAC4_OD1_1_71
Parcubacteria bacterium RAAC4_OD1_1, Parcubacteria, Bacteria
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Not on your lists |
94849..95895
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Rod shape-determining protein MreB n=1 Tax=Calditerrivibrio nitroreducens (strain DSM 19672 / NBRC 101217 / Yu37-1) RepID=E4TEE9_CALNY
rbh
Uncharacterized protein {ECO:0000313|EMBL:ETB63620.1}; TaxID=1394712 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium RAAC4_OD1_1.;"
rod shape-determining protein mreb
HEAT SHOCK PROTEIN 70 (HSP70) (db=HMMPanther db_id=PTHR19375:SF9 from=107 to=203 evalue=0.00028)
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RAAC4_OD1_1_72
Parcubacteria bacterium RAAC4_OD1_1, Parcubacteria, Bacteria
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Not on your lists |
95876..96670
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Uncharacterized protein {ECO:0000313|EMBL:ETB63621.1}; TaxID=1394712 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium RAAC4_OD1_1.;"
transmembrane_regions (db=TMHMM db_id=tmhmm from=21 to=43)
seg (db=Seg db_id=seg from=3 to=18)
coiled-coil (db=Coil db_id=coil from=94 to=115 evalue=NA)
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RAAC4_OD1_1_73
Parcubacteria bacterium RAAC4_OD1_1, Parcubacteria, Bacteria
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Not on your lists |
96646..97971
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Queuine tRNA-ribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777}; EC=2.4.2.29 {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777};; Guanine insertion enzym
queuine tRNA-ribosyltransferase (EC:2.4.2.29)
Queuine tRNA-ribosyltransferase n=1 Tax=actinobacterium SCGC AAA027-L06 RepID=J9DWH1_9ACTN
rbh
seg (db=Seg db_id=seg from=279 to=291)
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RAAC4_OD1_1_T76
unknown
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Not on your lists |
comp(100568..100641)
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transferRNA
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RAAC4_OD1_1_74
Parcubacteria bacterium RAAC4_OD1_1, Parcubacteria, Bacteria
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Not on your lists |
98241..100505
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UvrABC system protein B n=1 Tax=Coprobacillus sp. 29_1 RepID=E7G741_9FIRM
rbh
UvrABC system protein B {ECO:0000256|HAMAP-Rule:MF_00204, ECO:0000256|RuleBase:RU003587}; Short=Protein UvrB {ECO:0000256|HAMAP-Rule:MF_00204};; Excinuclease ABC subunit B {ECO:0000256|HAMAP-Rule:MF_0
uvrB; Excinuclease ABC subunit B
seg (db=Seg db_id=seg from=269 to=284)
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RAAC4_OD1_1_75
Parcubacteria bacterium RAAC4_OD1_1, Parcubacteria, Bacteria
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Not on your lists |
100776..103469
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UvrABC system protein A n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MIN3_9BACT
rbh
UvrABC system protein A {ECO:0000256|SAAS:SAAS00088996}; TaxID=1394712 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium RAAC4_OD1_1.;"
uvrA; UvrABC system protein A (UvrA protein) (Excinuclease ABC subunit A)(Excinuclease ATPase subunit)
seg (db=Seg db_id=seg from=2 to=13)
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RAAC4_OD1_1_76
Parcubacteria bacterium RAAC4_OD1_1, Parcubacteria, Bacteria
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Not on your lists |
comp(103513..103809)
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Uncharacterized protein {ECO:0000313|EMBL:ETB63625.1}; TaxID=1394712 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium RAAC4_OD1_1.;"
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RAAC4_OD1_1_77
Parcubacteria bacterium RAAC4_OD1_1, Parcubacteria, Bacteria
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Not on your lists |
103872..105116
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UvrC Helix-hairpin-helix N-terminal domain family n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JPT1_9BACT
UvrABC system protein C {ECO:0000256|SAAS:SAAS00125834}; TaxID=1394712 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium RAAC4_OD1_1.;"
putative excinuclease ABC, C subunit domain protein
(db=HMMPfam db_id=PF08459 from=267 to=401 evalue=1.3e-32 interpro_id=IPR001162 interpro_description=Excinuclease ABC, C subunit, C-terminal GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: nuclease activity (GO:0004518), Biological Process: nucleotide-excision repair (GO:0006289))
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RAAC4_OD1_1_78
Parcubacteria bacterium RAAC4_OD1_1, Parcubacteria, Bacteria
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Not on your lists |
105156..106187
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D-alanine--D-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732}; EC=6.3.2.4 {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732};; D-Ala-D-Ala ligase {ECO:0000
D-alanine--D-alanine ligase (EC:6.3.2.4)
D-alanine--D-alanine ligase n=1 Tax=Dictyoglomus thermophilum (strain ATCC 35947 / DSM 3960 / H-6-12) RepID=B5YDR1_DICT6
DALA_DALA_LIGASE_2 (db=PatternScan db_id=PS00844 from=283 to=311 evalue=0.0 interpro_id=IPR000291 interpro_description=D-alanine--D-alanine ligase/VANA/B/C, conserved site)
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RAAC4_OD1_1_79
Parcubacteria bacterium RAAC4_OD1_1, Parcubacteria, Bacteria
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Not on your lists |
106192..107019
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Glycerol-3-phosphate dehydrogenase (NAD(P)(+)) {ECO:0000256|SAAS:SAAS00080169}; EC=1.1.1.94 {ECO:0000256|SAAS:SAAS00080169};; TaxID=1394712 species="Bacteria; Parcubacteria.;" source="Parcubacteria ba
Glycerol-3-phosphate dehydrogenase [NAD(P)+] n=22 Tax=Fusobacterium RepID=GPDA_FUSNN
glycerol-3-phosphate dehydrogenase [NAD(P) ]
(db=HMMPfam db_id=PF07479 from=135 to=273 evalue=1.6e-34 interpro_id=IPR006109 interpro_description=Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal GO=Biological Process: carbohydrate metabolic process (GO:0005975), Molecular Function: oxidoreductase activity, acting on CH-OH group of donors (GO:0016614), Biological Process: oxidation-reduction process (GO:0055114))
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RAAC4_OD1_1_80
Parcubacteria bacterium RAAC4_OD1_1, Parcubacteria, Bacteria
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Not on your lists |
comp(106988..107647)
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Putative uncharacterized protein n=1 Tax=Methanobacterium sp. (strain AL-21) RepID=F0T9R8_METSL
Uncharacterized protein {ECO:0000313|EMBL:ETB63629.1}; TaxID=1394712 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium RAAC4_OD1_1.;"
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=13 to=32)
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RAAC4_OD1_1_T83
unknown
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Not on your lists |
comp(108146..108218)
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transferRNA
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RAAC4_OD1_1_81
Parcubacteria bacterium RAAC4_OD1_1, Parcubacteria, Bacteria
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Not on your lists |
comp(107775..107927)
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Uncharacterized protein {ECO:0000313|EMBL:ETB63630.1}; TaxID=1394712 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium RAAC4_OD1_1.;"
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RAAC4_OD1_1_82
Parcubacteria bacterium RAAC4_OD1_1, Parcubacteria, Bacteria
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Not on your lists |
comp(108263..109594)
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Natural resistance-associated macrophage protein n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1YAR4_9SPHI
rbh
Natural resistance-associated macrophage protein {ECO:0000313|EMBL:ETB63631.1}; TaxID=1394712 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium RAAC4_OD1_1.;"
Mn2+/Fe2-transporter, NRAMP family
transmembrane_regions (db=TMHMM db_id=tmhmm from=109 to=131)
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RAAC4_OD1_1_83
Parcubacteria bacterium RAAC4_OD1_1, Parcubacteria, Bacteria
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Not on your lists |
109649..111166
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Putative uncharacterized protein n=1 Tax=uncultured archaeon RepID=D1J980_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:ETB63632.1}; TaxID=1394712 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium RAAC4_OD1_1.;"
hypothetical protein
seg (db=Seg db_id=seg from=470 to=485)
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RAAC4_OD1_1_84
Parcubacteria bacterium RAAC4_OD1_1, Parcubacteria, Bacteria
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Not on your lists |
111247..111552
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Putative uncharacterized protein (Fragment) n=1 Tax=Amblyomma maculatum RepID=G3MFS0_9ACAR
Uncharacterized protein {ECO:0000313|EMBL:ETB63633.1}; TaxID=1394712 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium RAAC4_OD1_1.;"
cutA; C-type cytochrome biogenesis protein
(db=HMMPfam db_id=PF03091 from=1 to=99 evalue=2.6e-20 interpro_id=IPR004323 interpro_description=Divalent ion tolerance protein, CutA GO=Biological Process: response to metal ion (GO:0010038))
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RAAC4_OD1_1_85
Parcubacteria bacterium RAAC4_OD1_1, Parcubacteria, Bacteria
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Not on your lists |
111603..113909
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Putative uncharacterized protein n=1 Tax=uncultured archaeon RepID=D1J980_9ARCH
rbh
Uncharacterized protein {ECO:0000313|EMBL:ETB63634.1}; TaxID=1394712 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium RAAC4_OD1_1.;"
hypothetical protein
seg (db=Seg db_id=seg from=525 to=559)
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