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RAAC4_OD1_1_60 Annotations

Value Algorithm Source Identity Coverage Bit score Evalue Cross references
DNA-directed RNA polymerase subunit beta' similarity KEGG
DB: KEGG
46.6 999.99 1084 0.0 svt:SVTN_22660
DNA-directed RNA polymerase subunit beta' n=1 Tax=Kitasatospora setae (strain ATCC 33774 / DSM 43861 / JCM 3304 / KCC A-0304 / NBRC 14216 / KM-6054) RepID=E4NCS8_KITSK rbh similarity UNIREF
DB: UNIREF90
46.0 0.0 1073 0.0 svt:SVTN_22660
seg (db=Seg db_id=seg from=165 to=179) iprscan interpro
DB: Seg
0.0 0.0 0 0.0 svt:SVTN_22660
RNApol_bact_RpoC (db=HAMAP db_id=MF_01322 from=7 to=1203 evalue=9.389 interpro_id=IPR012754 interpro_description=DNA-directed RNA polymerase, subunit beta-prime GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription, DNA-dependent (GO:0006351)) iprscan interpro
DB: HAMAP
0.0 0.0 0 9.00e+00 svt:SVTN_22660
rpoC_TIGR: DNA-directed RNA polymerase, bet (db=HMMTigr db_id=TIGR02386 from=11 to=1195 evalue=0.0 interpro_id=IPR012754 interpro_description=DNA-directed RNA polymerase, subunit beta-prime GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription, DNA-dependent (GO:0006351)) iprscan interpro
DB: HMMTigr
0.0 0.0 0 0.0 svt:SVTN_22660
coiled-coil (db=Coil db_id=coil from=150 to=187 evalue=NA) iprscan interpro
DB: Coil
0.0 0.0 0 0.0 svt:SVTN_22660
DNA-DIRECTED RNA POLYMERASE BETA CHAIN (db=HMMPanther db_id=PTHR19376:SF4 from=6 to=1208 evalue=0.0) iprscan interpro
DB: HMMPanther
0.0 0.0 0 0.0 svt:SVTN_22660
DNA-DIRECTED RNA POLYMERASE (db=HMMPanther db_id=PTHR19376 from=6 to=1208 evalue=0.0) iprscan interpro
DB: HMMPanther
0.0 0.0 0 0.0 svt:SVTN_22660
no description (db=Gene3D db_id=G3DSA:3.90.1120.10 from=5 to=381 evalue=2.8e-108) iprscan interpro
DB: Gene3D
0.0 0.0 0 2.00e+00 svt:SVTN_22660
(db=HMMPfam db_id=PF04997 from=7 to=378 evalue=1.8e-91 interpro_id=IPR007080 interpro_description=RNA polymerase Rpb1, domain 1 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription, DNA-dependent (GO:0006351)) iprscan interpro
DB: HMMPfam
0.0 0.0 0 1.00e+00 svt:SVTN_22660
(db=HMMPfam db_id=PF04998 from=782 to=1148 evalue=3.6e-63 interpro_id=IPR007081 interpro_description=RNA polymerase Rpb1, domain 5 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription, DNA-dependent (GO:0006351)) iprscan interpro
DB: HMMPfam
0.0 0.0 0 3.00e+00 svt:SVTN_22660
(db=HMMPfam db_id=PF00623 from=380 to=520 evalue=3.2e-44 interpro_id=IPR000722 interpro_description=RNA polymerase, alpha subunit GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription, DNA-dependent (GO:0006351)) iprscan interpro
DB: HMMPfam
0.0 0.0 0 3.00e+00 svt:SVTN_22660
(db=HMMPfam db_id=PF04983 from=525 to=674 evalue=1.4e-22 interpro_id=IPR007066 interpro_description=RNA polymerase Rpb1, domain 3 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription, DNA-dependent (GO:0006351)) iprscan interpro
DB: HMMPfam
0.0 0.0 0 1.00e+00 svt:SVTN_22660
(db=HMMPfam db_id=PF05000 from=705 to=764 evalue=2.7e-06 interpro_id=IPR007083 interpro_description=RNA polymerase Rpb1, domain 4 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription, DNA-dependent (GO:0006351)) iprscan interpro
DB: HMMPfam
0.0 0.0 0 2.00e+00 svt:SVTN_22660
no description (db=HMMSmart db_id=SM00663 from=267 to=550 evalue=2.3e-154 interpro_id=IPR006592 interpro_description=RNA polymerase, N-terminal GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription, DNA-dependent (GO:0006351)) iprscan interpro
DB: HMMSmart
0.0 0.0 0 2.00e+00 svt:SVTN_22660
beta and beta-prime subunits of DNA dependent RNA-polymerase (db=superfamily db_id=SSF64484 from=3 to=1190 evalue=0.0) iprscan interpro
DB: superfamily
0.0 0.0 0 0.0 svt:SVTN_22660
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase UNIPROT
DB: UniProtKB
100.0 999.99 2375 0.0 V7PVH9_9BACT