| Value | Algorithm | Source | Identity | Coverage | Bit score | Evalue | Cross references |
|---|---|---|---|---|---|---|---|
| DNA-directed RNA polymerase subunit beta' | similarity |
KEGG
DB: KEGG |
46.6 | 999.99 | 1084 | 0.0 | svt:SVTN_22660 |
| DNA-directed RNA polymerase subunit beta' n=1 Tax=Kitasatospora setae (strain ATCC 33774 / DSM 43861 / JCM 3304 / KCC A-0304 / NBRC 14216 / KM-6054) RepID=E4NCS8_KITSK rbh | similarity |
UNIREF
DB: UNIREF90 |
46.0 | 0.0 | 1073 | 0.0 | svt:SVTN_22660 |
| seg (db=Seg db_id=seg from=165 to=179) | iprscan |
interpro
DB: Seg |
0.0 | 0.0 | 0 | 0.0 | svt:SVTN_22660 |
| RNApol_bact_RpoC (db=HAMAP db_id=MF_01322 from=7 to=1203 evalue=9.389 interpro_id=IPR012754 interpro_description=DNA-directed RNA polymerase, subunit beta-prime GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription, DNA-dependent (GO:0006351)) | iprscan |
interpro
DB: HAMAP |
0.0 | 0.0 | 0 | 9.00e+00 | svt:SVTN_22660 |
| rpoC_TIGR: DNA-directed RNA polymerase, bet (db=HMMTigr db_id=TIGR02386 from=11 to=1195 evalue=0.0 interpro_id=IPR012754 interpro_description=DNA-directed RNA polymerase, subunit beta-prime GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription, DNA-dependent (GO:0006351)) | iprscan |
interpro
DB: HMMTigr |
0.0 | 0.0 | 0 | 0.0 | svt:SVTN_22660 |
| coiled-coil (db=Coil db_id=coil from=150 to=187 evalue=NA) | iprscan |
interpro
DB: Coil |
0.0 | 0.0 | 0 | 0.0 | svt:SVTN_22660 |
| DNA-DIRECTED RNA POLYMERASE BETA CHAIN (db=HMMPanther db_id=PTHR19376:SF4 from=6 to=1208 evalue=0.0) | iprscan |
interpro
DB: HMMPanther |
0.0 | 0.0 | 0 | 0.0 | svt:SVTN_22660 |
| DNA-DIRECTED RNA POLYMERASE (db=HMMPanther db_id=PTHR19376 from=6 to=1208 evalue=0.0) | iprscan |
interpro
DB: HMMPanther |
0.0 | 0.0 | 0 | 0.0 | svt:SVTN_22660 |
| no description (db=Gene3D db_id=G3DSA:3.90.1120.10 from=5 to=381 evalue=2.8e-108) | iprscan |
interpro
DB: Gene3D |
0.0 | 0.0 | 0 | 2.00e+00 | svt:SVTN_22660 |
| (db=HMMPfam db_id=PF04997 from=7 to=378 evalue=1.8e-91 interpro_id=IPR007080 interpro_description=RNA polymerase Rpb1, domain 1 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription, DNA-dependent (GO:0006351)) | iprscan |
interpro
DB: HMMPfam |
0.0 | 0.0 | 0 | 1.00e+00 | svt:SVTN_22660 |
| (db=HMMPfam db_id=PF04998 from=782 to=1148 evalue=3.6e-63 interpro_id=IPR007081 interpro_description=RNA polymerase Rpb1, domain 5 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription, DNA-dependent (GO:0006351)) | iprscan |
interpro
DB: HMMPfam |
0.0 | 0.0 | 0 | 3.00e+00 | svt:SVTN_22660 |
| (db=HMMPfam db_id=PF00623 from=380 to=520 evalue=3.2e-44 interpro_id=IPR000722 interpro_description=RNA polymerase, alpha subunit GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription, DNA-dependent (GO:0006351)) | iprscan |
interpro
DB: HMMPfam |
0.0 | 0.0 | 0 | 3.00e+00 | svt:SVTN_22660 |
| (db=HMMPfam db_id=PF04983 from=525 to=674 evalue=1.4e-22 interpro_id=IPR007066 interpro_description=RNA polymerase Rpb1, domain 3 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription, DNA-dependent (GO:0006351)) | iprscan |
interpro
DB: HMMPfam |
0.0 | 0.0 | 0 | 1.00e+00 | svt:SVTN_22660 |
| (db=HMMPfam db_id=PF05000 from=705 to=764 evalue=2.7e-06 interpro_id=IPR007083 interpro_description=RNA polymerase Rpb1, domain 4 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription, DNA-dependent (GO:0006351)) | iprscan |
interpro
DB: HMMPfam |
0.0 | 0.0 | 0 | 2.00e+00 | svt:SVTN_22660 |
| no description (db=HMMSmart db_id=SM00663 from=267 to=550 evalue=2.3e-154 interpro_id=IPR006592 interpro_description=RNA polymerase, N-terminal GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription, DNA-dependent (GO:0006351)) | iprscan |
interpro
DB: HMMSmart |
0.0 | 0.0 | 0 | 2.00e+00 | svt:SVTN_22660 |
| beta and beta-prime subunits of DNA dependent RNA-polymerase (db=superfamily db_id=SSF64484 from=3 to=1190 evalue=0.0) | iprscan |
interpro
DB: superfamily |
0.0 | 0.0 | 0 | 0.0 | svt:SVTN_22660 |
| DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase |
UNIPROT
DB: UniProtKB |
100.0 | 999.99 | 2375 | 0.0 | V7PVH9_9BACT |