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PLM4_32_b1_sep16_Gemmatimonadetes_67_8

PLM4_32cm_b1_sep2016_Gemmatimonadetes_67_8
In projects: PLM4_32cm_b1_sep2016  |  PLM2016-drep98-anvio  |  PLM2016-NC-80p  |  gemmatimonadetes_ggkbase

Consensus taxonomy: Gemmatimonadetes  →  Bacteria

Displaying items 201-250 of 365 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
PLM4_32_b1_sep16_scaffold_13968
Species: RBG_16_Gemmatimonadetes_66_8_curated (50%)
6 4457 bp 67.89 7.84 96.12
PLM4_32_b1_sep16_scaffold_4254
Phylum: Gemmatimonadetes (90%)
10 9229 bp 65.98 7.83 94.56
PLM4_32_b1_sep16_scaffold_49163
Phylum: Gemmatimonadetes (50%)
6 4218 bp 66.07 7.82 78.66
PLM4_32_b1_sep16_scaffold_5930
Domain: Bacteria (76.92%)
13 11444 bp 67.69 7.80 96.36
PLM4_32_b1_sep16_scaffold_2094
Domain: Bacteria (93.33%)
15 12647 bp 67.13 7.80 94.92
PLM4_32_b1_sep16_scaffold_2451
Species: RLO_Gemmatimonadetes_68_9 (50%)
8 9278 bp 68.06 7.79 86.82
PLM4_32_b1_sep16_scaffold_4710
Species: RBG_16_Gemmatimonadetes_66_8_curated (71.43%)
7 5427 bp 66.50 7.77 97.18
PLM4_32_b1_sep16_scaffold_6597
Domain: Bacteria (83.33%)
6 5543 bp 66.95 7.77 94.77
PLM4_32_b1_sep16_scaffold_1474
Phylum: Gemmatimonadetes (83.33%)
12 9937 bp 68.93 7.76 95.79
PLM4_32_b1_sep16_scaffold_5381
Species: Marivirga tractuosa (50%)
2 5110 bp 67.44 7.75 99.45
PLM4_32_b1_sep16_scaffold_2120
Domain: Bacteria (75%)
8 7957 bp 67.86 7.75 97.31
PLM4_32_b1_sep16_scaffold_48831
Domain: Bacteria (57.14%)
7 4297 bp 66.88 7.75 84.97
PLM4_32_b1_sep16_scaffold_3355
Phylum: Gemmatimonadetes (70%)
10 10272 bp 66.72 7.74 93.08
PLM4_32_b1_sep16_scaffold_8991
Domain: Bacteria (57.14%)
7 6895 bp 67.93 7.74 92.89
PLM4_32_b1_sep16_scaffold_8260
Class: Gemmatimonadetes (60%)
5 6663 bp 68.24 7.74 95.81
PLM4_32_b1_sep16_scaffold_4171
Domain: Bacteria (84.62%)
13 12910 bp 66.89 7.73 93.63
PLM4_32_b1_sep16_scaffold_11230
Domain: Bacteria (85.71%)
7 6197 bp 69.84 7.72 91.30
PLM4_32_b1_sep16_scaffold_5743
Domain: Bacteria (100%)
7 9574 bp 67.85 7.72 93.69
PLM4_32_b1_sep16_scaffold_7073
Phylum: Bacteroidetes (66.67%)
3 4518 bp 67.20 7.70 90.70
PLM4_32_b1_sep16_scaffold_1112
Phylum: Gemmatimonadetes (60%)
10 19702 bp 69.36 7.70 96.02
PLM4_32_b1_sep16_scaffold_17154
Phylum: Gemmatimonadetes (83.33%)
6 5903 bp 67.15 7.70 94.99
PLM4_32_b1_sep16_scaffold_2294
Phylum: Gemmatimonadetes (71.43%)
14 12864 bp 67.44 7.70 94.75
PLM4_32_b1_sep16_scaffold_12265
Species: RLO_Gemmatimonadetes_68_9 (50%)
6 6535 bp 68.42 7.69 79.79
PLM4_32_b1_sep16_scaffold_3894
Class: Gemmatimonadetes (60%)
15 19920 bp 66.75 7.69 92.12
PLM4_32_b1_sep16_scaffold_6331 5 4741 bp 63.55 7.69 76.12
PLM4_32_b1_sep16_scaffold_14431
Domain: Bacteria (66.67%)
3 3237 bp 68.06 7.69 93.33
PLM4_32_b1_sep16_scaffold_3723
Domain: Bacteria (88.89%)
27 25073 bp 68.20 7.68 93.04
PLM4_32_b1_sep16_scaffold_11763
Domain: Bacteria (75%)
4 3558 bp 68.66 7.67 89.63
PLM4_32_b1_sep16_scaffold_8232
Class: Gemmatimonadetes (60%)
5 5499 bp 69.58 7.67 88.93
PLM4_32_b1_sep16_scaffold_2623
Class: Gemmatimonadetes (50%)
6 7160 bp 69.47 7.67 94.82
PLM4_32_b1_sep16_scaffold_5693
Phylum: Gemmatimonadetes (60%)
10 6896 bp 67.10 7.66 94.79
PLM4_32_b1_sep16_scaffold_17972
Domain: Bacteria (100%)
3 2922 bp 66.87 7.65 97.64
PLM4_32_b1_sep16_scaffold_7490
Species: RLO_Gemmatimonadetes_68_9 (50%)
4 4694 bp 67.21 7.64 95.93
PLM4_32_b1_sep16_scaffold_395
Species: RLO_Gemmatimonadetes_68_9 (50%)
18 22832 bp 67.97 7.63 91.84
PLM4_32_b1_sep16_scaffold_4959
Species: Gemmatimonadetes bacterium KBS708 (50%)
4 5299 bp 68.58 7.61 93.24
PLM4_32_b1_sep16_scaffold_1679
Domain: Bacteria (75%)
12 8828 bp 69.56 7.61 94.27
PLM4_32_b1_sep16_scaffold_1181
Domain: Bacteria (70.59%)
17 18328 bp 67.10 7.61 89.88
PLM4_32_b1_sep16_scaffold_8104
Domain: Bacteria (60%)
5 6492 bp 68.45 7.60 95.66
PLM4_32_b1_sep16_scaffold_5252
Domain: Bacteria (80%)
5 6002 bp 65.58 7.60 95.62
PLM4_32_b1_sep16_scaffold_1179
Phylum: Proteobacteria (50%)
8 10676 bp 67.24 7.59 95.26
PLM4_32_b1_sep16_scaffold_13671
Species: Gemmatimonadetes bacterium KBS708 (66.67%)
3 3318 bp 66.46 7.59 99.91
PLM4_32_b1_sep16_scaffold_3049
Domain: Bacteria (55.56%)
9 9145 bp 68.22 7.58 91.16
PLM4_32_b1_sep16_scaffold_25611
Species: Gemmatimonadetes bacterium KBS708 (60%)
5 3582 bp 65.91 7.58 100.17
PLM4_32_b1_sep16_scaffold_9283
Species: RLO_Gemmatimonadetes_68_9 (60%)
5 3984 bp 67.49 7.57 99.10
PLM4_32_b1_sep16_scaffold_1486
Phylum: Acidobacteria (50%)
12 10402 bp 66.18 7.57 92.46
PLM4_32_b1_sep16_scaffold_14687
Phylum: Proteobacteria (50%)
6 3210 bp 66.42 7.57 76.17
PLM4_32_b1_sep16_scaffold_15143
Species: R_Gammaproteobacteria_57_10 (50%)
2 4247 bp 68.05 7.56 98.54
PLM4_32_b1_sep16_scaffold_6452
Order: Myxococcales (50%)
4 4702 bp 68.38 7.56 100.04
PLM4_32_b1_sep16_scaffold_61243 5 2935 bp 69.95 7.56 96.49
PLM4_32_b1_sep16_scaffold_4455
Domain: Bacteria (80%)
5 6637 bp 66.49 7.55 100.03
Displaying items 201-250 of 365 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.