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PLM4_32_b1_sep16_Gemmatimonadetes_67_8

PLM4_32cm_b1_sep2016_Gemmatimonadetes_67_8
In projects: PLM4_32cm_b1_sep2016  |  PLM2016-drep98-anvio  |  PLM2016-NC-80p  |  gemmatimonadetes_ggkbase

Consensus taxonomy: Gemmatimonadetes  →  Bacteria

Displaying items 251-300 of 365 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
PLM4_32_b1_sep16_scaffold_1385
Domain: Bacteria (66.67%)
9 10369 bp 68.06 7.55 94.61
PLM4_32_b1_sep16_scaffold_1801
Domain: Bacteria (100%)
10 10196 bp 67.05 7.53 96.01
PLM4_32_b1_sep16_scaffold_16777 4 5104 bp 66.67 7.52 65.60
PLM4_32_b1_sep16_scaffold_6774
Species: Gemmatimonadetes bacterium KBS708 (62.5%)
8 8898 bp 66.46 7.52 96.09
PLM4_32_b1_sep16_scaffold_1068
Phylum: Gemmatimonadetes (60%)
10 12380 bp 67.88 7.50 91.67
PLM4_32_b1_sep16_scaffold_11736
Phylum: Proteobacteria (50%)
4 3562 bp 67.35 7.50 87.93
PLM4_32_b1_sep16_scaffold_4274
Phylum: Gemmatimonadetes (66.67%)
3 5678 bp 67.79 7.50 99.01
PLM4_32_b1_sep16_scaffold_10148
Class: Gemmatimonadetes (66.67%)
6 7329 bp 67.76 7.49 91.77
PLM4_32_b1_sep16_scaffold_5517
Domain: Bacteria (60%)
5 5047 bp 66.61 7.49 79.93
PLM4_32_b1_sep16_scaffold_2413
Domain: Bacteria (60%)
10 8646 bp 66.46 7.49 90.70
PLM4_32_b1_sep16_scaffold_4807
Phylum: Gemmatimonadetes (66.67%)
6 5375 bp 66.44 7.48 87.57
PLM4_32_b1_sep16_scaffold_1235
Domain: Bacteria (71.43%)
21 16858 bp 69.15 7.47 78.51
PLM4_32_b1_sep16_scaffold_32740
Phylum: Proteobacteria (75%)
4 2594 bp 64.19 7.46 81.88
PLM4_32_b1_sep16_scaffold_3927
Domain: Bacteria (75%)
8 7185 bp 67.20 7.45 90.69
PLM4_32_b1_sep16_scaffold_4237
Domain: Bacteria (88.89%)
18 15843 bp 67.48 7.44 85.40
PLM4_32_b1_sep16_scaffold_1051
Phylum: Gemmatimonadetes (66.67%)
12 11426 bp 66.85 7.44 89.82
PLM4_32_b1_sep16_scaffold_19271
Class: Gemmatimonadetes (66.67%)
3 2828 bp 66.90 7.43 97.49
PLM4_32_b1_sep16_scaffold_9998
Domain: Bacteria (57.14%)
7 4443 bp 65.68 7.43 85.15
PLM4_32_b1_sep16_scaffold_928
Phylum: Gemmatimonadetes (50%)
16 13502 bp 67.01 7.40 93.96
PLM4_32_b1_sep16_scaffold_6791
Domain: Bacteria (100%)
5 5480 bp 68.89 7.39 101.11
PLM4_32_b1_sep16_scaffold_3185
Domain: Bacteria (80%)
10 8968 bp 66.10 7.39 89.75
PLM4_32_b1_sep16_scaffold_8112
Phylum: Gemmatimonadetes (90%)
10 9166 bp 68.95 7.38 96.88
PLM4_32_b1_sep16_scaffold_28642
Species: Gemmatimonadetes bacterium KBS708 (50%)
4 4449 bp 66.78 7.38 93.86
PLM4_32_b1_sep16_scaffold_8828
Domain: Bacteria (72.73%)
11 7488 bp 66.29 7.37 96.43
PLM4_32_b1_sep16_scaffold_1695
Domain: Bacteria (81.82%)
11 8777 bp 66.36 7.37 90.58
PLM4_32_b1_sep16_scaffold_2637
Domain: Bacteria (71.43%)
7 7756 bp 67.34 7.37 84.94
PLM4_32_b1_sep16_scaffold_14808
Phylum: Gemmatimonadetes (75%)
4 3585 bp 67.92 7.36 98.91
PLM4_32_b1_sep16_scaffold_3309
Domain: Bacteria (76.47%)
17 18680 bp 67.68 7.36 93.57
PLM4_32_b1_sep16_scaffold_18039
Domain: Bacteria (92.31%)
13 10782 bp 67.27 7.33 91.18
PLM4_32_b1_sep16_scaffold_4208
Phylum: Gemmatimonadetes (85.71%)
7 7041 bp 67.94 7.33 96.42
PLM4_32_b1_sep16_scaffold_1277
Phylum: Gemmatimonadetes (64.29%)
14 17006 bp 68.85 7.32 95.88
PLM4_32_b1_sep16_scaffold_6383
Domain: Bacteria (50%)
4 5725 bp 66.29 7.31 84.79
PLM4_32_b1_sep16_scaffold_12892
Species: RLO_Gemmatimonadetes_68_9 (50%)
4 3413 bp 67.89 7.30 94.76
PLM4_32_b1_sep16_scaffold_17632
Domain: Bacteria (66.67%)
6 3479 bp 66.63 7.29 94.68
PLM4_32_b1_sep16_scaffold_906
Phylum: Gemmatimonadetes (84.85%)
33 34389 bp 68.46 7.29 95.30
PLM4_32_b1_sep16_scaffold_5256
Species: RLO_Gemmatimonadetes_68_9 (62.5%)
8 11097 bp 68.37 7.29 92.21
PLM4_32_b1_sep16_scaffold_8393
Phylum: Gemmatimonadetes (100%)
5 6187 bp 64.83 7.27 96.44
PLM4_32_b1_sep16_scaffold_17276
Species: RBG_16_Aminicenantes_63_16_curated (50%)
2 2976 bp 68.68 7.26 100.00
PLM4_32_b1_sep16_scaffold_1343
Phylum: Gemmatimonadetes (66.67%)
9 13978 bp 67.10 7.23 94.03
PLM4_32_b1_sep16_scaffold_18997 3 2848 bp 68.43 7.22 97.96
PLM4_32_b1_sep16_scaffold_5058
Phylum: Gemmatimonadetes (57.14%)
7 7361 bp 66.70 7.21 94.31
PLM4_32_b1_sep16_scaffold_41076
Domain: Bacteria (71.43%)
7 3329 bp 65.67 7.21 96.88
PLM4_32_b1_sep16_scaffold_1532
Domain: Bacteria (83.33%)
12 9227 bp 67.82 7.19 87.23
PLM4_32_b1_sep16_scaffold_4131
Domain: Bacteria (83.33%)
6 5772 bp 66.81 7.17 93.87
PLM4_32_b1_sep16_scaffold_13048
Species: RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated (50%)
2 3391 bp 68.83 7.17 92.45
PLM4_32_b1_sep16_scaffold_3596
Phylum: Gemmatimonadetes (50%)
6 6148 bp 65.16 7.17 81.69
PLM4_32_b1_sep16_scaffold_56271
Phylum: Gemmatimonadetes (50%)
4 2850 bp 65.75 7.16 67.37
PLM4_32_b1_sep16_scaffold_3519
Domain: Bacteria (100%)
9 8374 bp 67.76 7.15 93.65
PLM4_32_b1_sep16_scaffold_24889
Domain: Bacteria (85.71%)
7 4877 bp 66.35 7.14 93.44
PLM4_32_b1_sep16_scaffold_10083
Phylum: Proteobacteria (66.67%)
3 3832 bp 71.03 7.09 102.32
Displaying items 251-300 of 365 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.