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PLM4_32_b1_sep16_Gemmatimonadetes_67_8

PLM4_32cm_b1_sep2016_Gemmatimonadetes_67_8
In projects: PLM4_32cm_b1_sep2016  |  PLM2016-drep98-anvio  |  PLM2016-NC-80p  |  gemmatimonadetes_ggkbase

Consensus taxonomy: Gemmatimonadetes  →  Bacteria

Displaying items 301-350 of 365 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
PLM4_32_b1_sep16_scaffold_21072
Domain: Bacteria (87.5%)
8 7476 bp 65.42 7.08 80.86
PLM4_32_b1_sep16_scaffold_16536
Domain: Bacteria (100%)
4 3038 bp 68.27 7.06 92.43
PLM4_32_b1_sep16_scaffold_10327
Phylum: Gemmatimonadetes (57.14%)
7 5321 bp 67.86 7.05 88.84
PLM4_32_b1_sep16_scaffold_38747
Domain: Bacteria (60%)
5 3644 bp 66.00 7.04 84.71
PLM4_32_b1_sep16_scaffold_10796
Domain: Bacteria (100%)
4 3715 bp 70.98 7.03 96.18
PLM4_32_b1_sep16_scaffold_4288
Domain: Bacteria (50%)
10 11694 bp 66.60 7.00 93.02
PLM4_32_b1_sep16_scaffold_17433 5 2963 bp 70.06 6.99 100.03
PLM4_32_b1_sep16_scaffold_9127
Domain: Bacteria (57.14%)
7 5558 bp 67.58 6.99 95.38
PLM4_32_b1_sep16_scaffold_37473
Domain: Bacteria (100%)
3 3539 bp 67.22 6.99 90.87
PLM4_32_b1_sep16_scaffold_2167
Domain: Bacteria (77.78%)
9 10340 bp 65.82 6.98 90.96
PLM4_32_b1_sep16_scaffold_16650
Domain: Bacteria (100%)
3 3488 bp 68.43 6.97 93.75
PLM4_32_b1_sep16_scaffold_35823
Phylum: Gemmatimonadetes (66.67%)
9 7488 bp 65.52 6.95 95.99
PLM4_32_b1_sep16_scaffold_3654
Domain: Bacteria (100%)
7 6098 bp 68.10 6.94 92.69
PLM4_32_b1_sep16_scaffold_19854
Domain: Bacteria (100%)
3 2789 bp 65.44 6.94 87.77
PLM4_32_b1_sep16_scaffold_2798
Phylum: Gemmatimonadetes (70%)
10 8665 bp 68.69 6.91 98.53
PLM4_32_b1_sep16_scaffold_49034
Species: Gemmatimonadetes bacterium KBS708 (66.67%)
3 4171 bp 67.71 6.90 76.89
PLM4_32_b1_sep16_scaffold_1589
Phylum: Gemmatimonadetes (57.14%)
7 9072 bp 66.16 6.88 92.33
PLM4_32_b1_sep16_scaffold_7281
Domain: Bacteria (95.45%)
22 21309 bp 67.54 6.87 89.79
PLM4_32_b1_sep16_scaffold_3356
Phylum: Proteobacteria (71.43%)
7 11266 bp 68.26 6.86 92.11
PLM4_32_b1_sep16_scaffold_26971
Species: Gemmatimonadetes bacterium KBS708 (66.67%)
3 3083 bp 63.74 6.86 76.97
PLM4_32_b1_sep16_scaffold_13981
Domain: Bacteria (60%)
5 3282 bp 67.46 6.86 87.93
PLM4_32_b1_sep16_scaffold_8641
Domain: Bacteria (77.78%)
9 5013 bp 65.75 6.85 88.75
PLM4_32_b1_sep16_scaffold_10968
Class: Gemmatimonadetes (50%)
4 3685 bp 66.24 6.84 87.54
PLM4_32_b1_sep16_scaffold_40088 8 3529 bp 64.95 6.80 90.68
PLM4_32_b1_sep16_scaffold_3154
Domain: Bacteria (80%)
5 6531 bp 69.07 6.80 94.03
PLM4_32_b1_sep16_scaffold_2062
Domain: Bacteria (72.73%)
22 28803 bp 66.98 6.78 86.68
PLM4_32_b1_sep16_scaffold_52343
Phylum: Gemmatimonadetes (50%)
4 2704 bp 67.64 6.77 84.21
PLM4_32_b1_sep16_scaffold_38626
Domain: Bacteria (60%)
5 3639 bp 67.11 6.76 97.86
PLM4_32_b1_sep16_scaffold_14708
Species: Gemmatimonadetes bacterium KBS708 (75%)
4 4856 bp 68.16 6.76 97.36
PLM4_32_b1_sep16_scaffold_18406
Phylum: Proteobacteria (50%)
8 7532 bp 66.58 6.75 90.14
PLM4_32_b1_sep16_scaffold_4004
Domain: Bacteria (88.89%)
9 8720 bp 67.71 6.74 96.36
PLM4_32_b1_sep16_scaffold_5940
Phylum: Gemmatimonadetes (66.67%)
9 8927 bp 66.81 6.74 90.40
PLM4_32_b1_sep16_scaffold_3999
Domain: Bacteria (100%)
6 6522 bp 68.11 6.62 98.48
PLM4_32_b1_sep16_scaffold_20148
Species: uncultured bacterium (50%)
2 2770 bp 65.74 6.61 79.28
PLM4_32_b1_sep16_scaffold_4129
Domain: Bacteria (83.33%)
6 5774 bp 69.40 6.57 95.96
PLM4_32_b1_sep16_scaffold_9309
Domain: Bacteria (85.71%)
7 5254 bp 67.87 6.51 93.93
PLM4_32_b1_sep16_scaffold_10175
Domain: Bacteria (100%)
7 4380 bp 66.35 6.47 90.27
PLM4_32_b1_sep16_scaffold_112131
Domain: Bacteria (100%)
4 2936 bp 64.54 6.39 84.40
PLM4_32_b1_sep16_scaffold_17907
Phylum: Gemmatimonadetes (71.43%)
7 6766 bp 66.05 6.38 84.60
PLM4_32_b1_sep16_scaffold_3993
Phylum: Gemmatimonadetes (50%)
4 5855 bp 66.34 6.33 90.69
PLM4_32_b1_sep16_scaffold_13341
Domain: Bacteria (50%)
6 4042 bp 64.13 6.31 88.17
PLM4_32_b1_sep16_scaffold_12100
Domain: Bacteria (100%)
5 4871 bp 65.59 6.28 91.77
PLM4_32_b1_sep16_scaffold_18682
Domain: Bacteria (80%)
5 3917 bp 68.47 6.28 94.51
PLM4_32_b1_sep16_scaffold_2488
Species: R_Gemmatimonadetes_71_11 (50%)
6 7319 bp 68.30 6.27 94.44
PLM4_32_b1_sep16_scaffold_12244
Domain: Bacteria (50%)
8 8376 bp 67.41 6.27 95.88
PLM4_32_b1_sep16_scaffold_1807
Domain: Bacteria (83.33%)
12 13915 bp 66.66 6.24 82.59
PLM4_32_b1_sep16_scaffold_7503 10 8365 bp 67.05 6.22 92.42
PLM4_32_b1_sep16_scaffold_12360
Phylum: Proteobacteria (60%)
5 4061 bp 67.72 6.17 95.89
PLM4_32_b1_sep16_scaffold_18648
Species: GWC2_Gemmatimonadetes_71_10_curated (60%)
5 2871 bp 68.79 6.17 90.91
PLM4_32_b1_sep16_scaffold_70726
Domain: Bacteria (100%)
4 2764 bp 67.76 6.13 83.36
Displaying items 301-350 of 365 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.