Alias: GEM22_13
name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
cn_combo_scaffold_559_31
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria
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Not on your lists |
comp(41521..43695)
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ligA; DNA ligase (NAD(+)) (EC:6.5.1.2); K01972 DNA ligase (NAD+) [EC:6.5.1.2] id=24531173 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
ligA; DNA ligase (NAD(+)) (EC:6.5.1.2); K01972 DNA ligase (NAD+) [EC:6.5.1.2] Tax=RBG_16_RIF_WS3X_71_46_curated
ligA; DNA ligase (NAD(+)) (EC:6.5.1.2)
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cn_combo_scaffold_559_32
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
44052..45836
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acsA; acetyl-coenzyme A synthetase; K01895 acetyl-CoA synthetase [EC:6.2.1.1] Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
acsA; acetyl-Coa synthetase (EC:6.2.1.1); K01895 acetyl-CoA synthetase [EC:6.2.1.1] id=14626804 bin=bin7_NC10_sister species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=bin7_NC10_sister organism_group=NC10
acsA; acetyl-Coa synthetase (EC:6.2.1.1)
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cn_combo_scaffold_559_33
Desulfococcus multivorans, Desulfococcus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
45833..46855
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Pyruvate dehydrogenase E1 component subunit alpha {ECO:0000256|RuleBase:RU361139}; EC=1.2.4.1 {ECO:0000256|RuleBase:RU361139};; TaxID=1121405 species="Bacteria; Proteobacteria; Deltaproteobacteria; De
Pyruvate dehydrogenase (Acetyl-transferring) E1 component, alpha subunit n=1 Tax=Desulfococcus multivorans DSM 2059 RepID=S7U6H3_DESML
pyruvate dehydrogenase, E1 component, alpha subunit
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cn_combo_scaffold_559_34
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
46852..47847
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pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase component subunit beta (EC:1.2.4.1); K00162 pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] Tax=RIFCSPLOWO2_12_FULL_Deltaprot
Pyruvate dehydrogenase E1 component,beta subunit n=2 Tax=Streptomyces hygroscopicus subsp. jinggangensis RepID=H2JP49_STRHJ
pyruvate dehydrogenase E1 component,beta subunit
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cn_combo_scaffold_559_35
Rhodococcus ruber, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria
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Not on your lists |
47844..49235
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Branched-chain alpha-keto acid dehydrogenase subunit E2 n=1 Tax=Rhodococcus ruber BKS 20-38 RepID=M2ZYC6_9NOCA
Branched-chain alpha-keto acid dehydrogenase subunit E2 {ECO:0000313|EMBL:EME65708.1}; TaxID=1278076 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococ
dehydrogenase catalytic domain-containing protein
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cn_combo_scaffold_559_36
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
49232..49486
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putative acyl carrier protein Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
putative acyl carrier protein id=14626800 bin=bin7_NC10_sister species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=bin7_NC10_sister organism_group=NC10
phosphopantetheine-binding protein
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cn_combo_scaffold_559_trna_2
unknown
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Not on your lists |
comp(49584..49656)
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transferRNA
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cn_combo_scaffold_559_37
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria
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Not on your lists |
49761..51035
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Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAD5_GEMAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAH39733.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-
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cn_combo_scaffold_559_trna_1
unknown
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Not on your lists |
comp(51216..51288)
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transferRNA
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cn_combo_scaffold_559_38
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria
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Not on your lists |
51537..53012
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phr; deoxyribodipyrimidine photolyase (EC:4.1.99.3)
rbh
Deoxyribodipyrimidine photolyase {ECO:0000313|EMBL:BAH39734.1}; EC=4.1.99.3 {ECO:0000313|EMBL:BAH39734.1};; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemma
Deoxyribodipyrimidine photolyase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAD6_GEMAT
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cn_combo_scaffold_559_39
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria
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Not on your lists |
comp(53009..53365)
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Similar to tr|Q8YW97|Q8YW97 n=1 Tax=Microcystis sp. T1-4 RepID=I4ICG2_9CHRO
Stress-induced protein, KGG, repeat-containing protein
Stress-induced protein, KGG, repeat-containing protein {ECO:0000313|EMBL:AHG91865.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
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cn_combo_scaffold_559_40
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria
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Not on your lists |
53630..54703
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rnz; ribonuclease Z (EC:3.1.26.11)
rbh
Ribonuclease Z {ECO:0000255|HAMAP-Rule:MF_01818}; Short=RNase Z {ECO:0000255|HAMAP-Rule:MF_01818};; EC=3.1.26.11 {ECO:0000255|HAMAP-Rule:MF_01818};; tRNA 3 endonuclease {ECO:0000255|HAMAP-Rule:MF_0181
Ribonuclease Z n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=RNZ_GEMAT
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cn_combo_scaffold_559_41
unknown
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Not on your lists |
comp(54733..55008)
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This feature has no annotations |
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cn_combo_scaffold_559_42
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria
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Not on your lists |
comp(55026..55448)
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hypothetical protein n=1 Tax=Schlesneria paludicola RepID=UPI00029A5E0E
Protein of unknown function DUF2203
Uncharacterized protein {ECO:0000313|EMBL:AHG91870.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
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cn_combo_scaffold_559_43
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria
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Not on your lists |
comp(55445..56812)
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Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAE4_GEMAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG91872.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
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cn_combo_scaffold_559_44
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria
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Not on your lists |
comp(56869..58113)
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Cysteine desulfurase family protein {ECO:0000313|EMBL:EEF60511.1}; EC=2.8.1.7 {ECO:0000313|EMBL:EEF60511.1};; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Ver
Cysteine desulfurase family protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XI18_9BACT
cysteine desulfurase family protein
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cn_combo_scaffold_559_45
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria
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Not on your lists |
comp(58175..59062)
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3-hydroxyisobutyrate dehydrogenase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAE6_GEMAT
6-phosphogluconate dehydrogenase NAD-binding protein
6-phosphogluconate dehydrogenase NAD-binding protein {ECO:0000313|EMBL:AHG91878.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
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cn_combo_scaffold_559_46
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria
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Not on your lists |
59120..59368
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Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAE7_GEMAT
Uncharacterized protein {ECO:0000313|EMBL:BAH39745.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-
hypothetical protein
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cn_combo_scaffold_559_47
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria
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Not on your lists |
comp(59465..62014)
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Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ADK3_GEMAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG87777.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
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cn_combo_scaffold_559_48
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria
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Not on your lists |
62397..63779
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Magnesium transporter n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAE8_GEMAT
magnesium transporter
Magnesium transporter MgtE {ECO:0000256|RuleBase:RU362011}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
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cn_combo_scaffold_559_49
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria
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Not on your lists |
63776..64687
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Hypothetical membrane protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAE9_GEMAT
protein of unknown function DUF6 transmembrane
Uncharacterized protein {ECO:0000313|EMBL:AHG91884.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
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cn_combo_scaffold_559_50
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria
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Not on your lists |
comp(64749..65477)
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Surfeit locus 1 family protein
Surfeit locus 1 family protein {ECO:0000313|EMBL:AHG91886.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
hypothetical protein id=1244488 bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
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cn_combo_scaffold_559_51
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria
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Not on your lists |
comp(65506..66387)
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Gll0683 protein n=1 Tax=Gloeobacter violaceus (strain PCC 7421) RepID=Q7NMT2_GLOVI
protein of unknown function DUF72
Uncharacterized protein {ECO:0000313|EMBL:AHG91889.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
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cn_combo_scaffold_559_52
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria
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Not on your lists |
66521..67390
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Hypothetical membrane protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ADR1_GEMAT
membrane protease subunit, stomatin/prohibitin Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
hypothetical membrane protein
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cn_combo_scaffold_559_53
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria
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Not on your lists |
67495..67695
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Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ADR2_GEMAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAH40639.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-
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cn_combo_scaffold_559_54
unknown
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Not on your lists |
67836..68192
|
This feature has no annotations |
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cn_combo_scaffold_559_55
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria
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Not on your lists |
comp(68215..69708)
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MacB-like periplasmic core domain protein
rbh
MacB-like periplasmic core domain protein {ECO:0000313|EMBL:AHG91892.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
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cn_combo_scaffold_559_56
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria
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Not on your lists |
comp(69724..70521)
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ABC-type antimicrobial peptide transport system, ATPase component n=1 Tax=Caulobacter sp. AP07 RepID=J2P635_9CAUL
ABC transporter related protein
ABC transporter related protein {ECO:0000313|EMBL:AHG91893.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
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cn_combo_scaffold_559_57
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria
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Not on your lists |
comp(70518..71705)
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Hypothetical membrane protein n=1 Tax=Rhodococcus sp. AW25M09 RepID=L8DAG1_9NOCA
protein of unknown function DUF214
Uncharacterized protein {ECO:0000313|EMBL:AHG91894.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
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cn_combo_scaffold_559_58
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria
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Not on your lists |
comp(71705..72640)
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Uncharacterized protein n=1 Tax=Gordonia rhizosphera NBRC 16068 RepID=K6VVW3_9ACTO
protein of unknown function DUF214
Uncharacterized protein {ECO:0000313|EMBL:AHG91895.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
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