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cn_combo_scaffold_559

Alias: GEM22_13

Search features with annotation key words

Displaying items 1-30 of 87 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_559_1
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

1..486
DNA (486bp) protein (162aa)
Dicarboxylate carrier protein n=1 Tax=Acetonema longum DSM 6540 RepID=F7NNN3_9FIRM
Dicarboxylate carrier MatC domain protein
Dicarboxylate carrier MatC domain protein {ECO:0000313|EMBL:AHG89747.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
cn_combo_scaffold_559_2
RBG_19FT_COMBO_Aminicenantes_58_17_curated, Aminicenantes, Bacteria

Not on your lists

comp(555..2564)
DNA (2010bp) protein (670aa)
Peptidase S9 prolyl oligopeptidase active site domain protein n=1 Tax=Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896) RepID=D2QTF9_SPILD
peptidase S9 prolyl oligopeptidase Tax=RBG_19FT_COMBO_Aminicenantes_58_17_curated
WD40-like beta Propeller containing protein
cn_combo_scaffold_559_3
Chthonomonas calidirosea, Chthonomonas, Chthonomonadales, Chthonomonadetes, Armatimonadetes, Bacteria

Not on your lists

comp(2699..4582)
DNA (1884bp) protein (628aa)
PAS domain S-box/diguanylate cyclase (GGDEF) domain n=1 Tax=Chthonomonas calidirosea T49 RepID=S0EWS4_9BACT
PAS domain S-box/diguanylate cyclase (GGDEF) domain
PAS domain S-box/diguanylate cyclase (GGDEF) domain {ECO:0000313|EMBL:CCW34203.1}; TaxID=1303518 species="Bacteria; Armatimonadetes; Chthonomonadetes; Chthonomonadales; Chthonomonadaceae; Chthonomonas
cn_combo_scaffold_559_4
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(4716..5144)
DNA (429bp) protein (143aa)
Hypothetical membrane protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AEE4_GEMAT
hypothetical membrane protein
Hypothetical membrane protein {ECO:0000313|EMBL:BAH40871.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (str
cn_combo_scaffold_559_5
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(5200..6876)
DNA (1677bp) protein (559aa)
Amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit {ECO:0000313|EMBL:CDM64699.1}; EC=3.5.1.4 {ECO:0000313|EMBL:CDM64699.1};; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdi
Amidotransferase-related protein n=1 Tax=Myxococcus sp. (contaminant ex DSM 436) RepID=U2RWP6_9DELT
Amidase
cn_combo_scaffold_559_6
Ignavibacterium album, Ignavibacterium, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

7143..8711
DNA (1569bp) protein (523aa)
Transporter n=1 Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0AHB0_IGNAJ
SNF family Na+-dependent transporter
Transporter {ECO:0000256|RuleBase:RU003732}; TaxID=945713 species="Bacteria; Ignavibacteriae; Ignavibacteria; Ignavibacteriales; Ignavibacteriaceae; Ignavibacterium.;" source="Ignavibacterium album (s
cn_combo_scaffold_559_7
Gloeocapsa sp. PCC 7428, Gloeocapsa, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(8820..10574)
DNA (1755bp) protein (585aa)
Diguanylate cyclase/phosphodiesterase with GAF sensor n=1 Tax=Gloeocapsa sp. PCC 7428 RepID=K9X955_9CHRO
diguanylate cyclase/phosphodiesterase with GAF sensor
Diguanylate cyclase/phosphodiesterase with GAF sensor {ECO:0000313|EMBL:AFZ28629.1}; TaxID=1173026 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Gloeocapsa.;" source="Gloeoca
cn_combo_scaffold_559_8
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

10908..11801
DNA (894bp) protein (298aa)
D-aminopeptidase n=1 Tax=Streptomyces sp. CNY228 RepID=UPI0003778FFF
D-aminopeptidase Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
D-aminopeptidase
cn_combo_scaffold_559_9
uncultured Acidobacteria bacterium, Acidobacteria, Bacteria

Not on your lists

11931..15140
DNA (3210bp) protein (1070aa)
hypothetical protein n=1 Tax=Balneola vulgaris RepID=UPI00036191E4
Glycosyl hydrolase {ECO:0000313|EMBL:BAL54885.1}; TaxID=171953 species="Bacteria; Acidobacteria; environmental samples.;" source="uncultured Acidobacteria bacterium.;"
glycosyl hydrolase
cn_combo_scaffold_559_10
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(15268..17673)
DNA (2406bp) protein (802aa)
Putative signaling protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5B4_GEMAT
diguanylate cyclase rbh
Diguanylate cyclase {ECO:0000313|EMBL:AHG92030.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
cn_combo_scaffold_559_11
Bacillus gaemokensis, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

17852..19123
DNA (1272bp) protein (424aa)
C4-dicarboxylate transport protein n=3 Tax=Bacillus cereus RepID=R8PUT9_BACCE
C4-dicarboxylate transport protein {ECO:0000256|HAMAP-Rule:MF_01300}; TaxID=574375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus cereus group.;" source="Bacillus
dctA; aerobic C4-dicarboxylate transport protein
cn_combo_scaffold_559_12
Rhodospirillum centenum, Rhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19139..19870)
DNA (732bp) protein (244aa)
prephenate dehydratase (EC:4.2.1.51)
Prephenate dehydratase, putative {ECO:0000313|EMBL:ACJ00766.1}; EC=4.2.1.51 {ECO:0000313|EMBL:ACJ00766.1};; TaxID=414684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodo
Prephenate dehydratase, putative n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6IWU2_RHOCS
cn_combo_scaffold_559_13
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(19867..20796)
DNA (930bp) protein (310aa)
phospho-2-dehydro-3-deoxyheptonate aldolase (EC:2.5.1.54)
Phospho-2-dehydro-3-deoxyheptonate aldolase {ECO:0000313|EMBL:BAH40887.1}; EC=2.5.1.54 {ECO:0000313|EMBL:BAH40887.1};; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonada
Phospho-2-dehydro-3-deoxyheptonate aldolase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AEG0_GEMAT
cn_combo_scaffold_559_14
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

21097..21657
DNA (561bp) protein (187aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4U0_GEMAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG92772.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
cn_combo_scaffold_559_15
unknown

Not on your lists

21863..22048
DNA (186bp) protein (62aa)

This feature has no annotations

cn_combo_scaffold_559_16
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(22142..23317)
DNA (1176bp) protein (392aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ACE9_GEMAT
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:BAH40176.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-
cn_combo_scaffold_559_17
Kitasatospora setae, Kitasatospora, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23391..24701)
DNA (1311bp) protein (437aa)
putative hydrolase n=1 Tax=Streptomyces acidiscabies RepID=UPI000289D88E
putative hydrolase
Putative hydrolase {ECO:0000313|EMBL:BAJ32072.1}; TaxID=452652 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Kitasatospora.;" source="Kitasatospora setae (strain ATCC 33774 /
cn_combo_scaffold_559_18
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

24742..26385
DNA (1644bp) protein (548aa)
Gly-Xaa carboxypeptidase (EC:3.4.17.4)
Gly-Xaa carboxypeptidase {ECO:0000313|EMBL:AEN73755.1}; EC=3.4.17.4 {ECO:0000313|EMBL:AEN73755.1};; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermace
Gly-Xaa carboxypeptidase n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SHZ7_RHOMR
cn_combo_scaffold_559_19
Roseiflexus sp. RS-1, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

26688..30374
DNA (3687bp) protein (1229aa)
Cna B domain protein n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=A5UU30_ROSS1
Cna B domain-containing protein rbh
Cna B domain protein {ECO:0000313|EMBL:ABQ90133.1}; Flags: Precursor;; TaxID=357808 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;" source=
cn_combo_scaffold_559_20
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(30531..31736)
DNA (1206bp) protein (402aa)
Putative beta-lactamase n=1 Tax=Variovorax paradoxus B4 RepID=T1XLW3_VARPD
putative beta-lactamase Tax=RBG_16_Gemmatimonadetes_66_8_curated
putative beta-lactamase
cn_combo_scaffold_559_21
Leptolyngbya sp. PCC 7375, Leptolyngbya, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

32011..32451
DNA (441bp) protein (147aa)
PAS domain S-box n=1 Tax=Leptolyngbya sp. PCC 7375 RepID=K9EUF2_9CYAN
PAS domain S-box {ECO:0000313|EMBL:EKV00224.1}; TaxID=102129 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Leptolyngbya.;" source="Leptolyngbya sp. PCC 7375.;"
hypothetical protein
cn_combo_scaffold_559_22
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

32728..34287
DNA (1560bp) protein (520aa)
Amidohydrolase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q025P8_SOLUE
amidohydrolase
Amidohydrolase {ECO:0000313|EMBL:ABJ83271.1}; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibact
cn_combo_scaffold_559_23
unknown

Not on your lists

34319..34948
DNA (630bp) protein (210aa)

This feature has no annotations

cn_combo_scaffold_559_24
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(34965..36281)
DNA (1317bp) protein (439aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9G4_GEMAT
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:BAH39141.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-
cn_combo_scaffold_559_25
Intrasporangium oryzae, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(36455..37105)
DNA (651bp) protein (217aa)
Uncharacterized protein n=1 Tax=Micavibrio aeruginosavorus EPB RepID=M4VHP4_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EWT03400.1}; TaxID=1386089 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium oryzae NRRL B-2447
hypothetical protein
cn_combo_scaffold_559_26
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(37242..38507)
DNA (1266bp) protein (422aa)
Uncharacterized protein n=1 Tax=Methanoculleus bourgensis (strain ATCC 43281 / DSM 3045 / OCM 15 / MS2) RepID=I7L120_METBM
Ig domain protein group 2 domain protein
Ig domain protein group 2 domain protein {ECO:0000313|EMBL:AHG91642.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
cn_combo_scaffold_559_27
unknown

Not on your lists

comp(38611..38853)
DNA (243bp) protein (81aa)

This feature has no annotations

cn_combo_scaffold_559_28
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(38864..39079)
DNA (216bp) protein (72aa)
Translation initiation factor IF-1 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9Q0_GEMAT
infA; translation initiation factor IF-1
Translation initiation factor IF-1 {ECO:0000256|HAMAP-Rule:MF_00075}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurant
cn_combo_scaffold_559_29
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(39171..39383)
DNA (213bp) protein (71aa)
Cold shock protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9Q1_GEMAT
cold shock protein
Cold shock protein {ECO:0000313|EMBL:BAH39228.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 /
cn_combo_scaffold_559_30
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

39699..41492
DNA (1794bp) protein (598aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4Y252_SORCE
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
hypothetical protein
Displaying items 1-30 of 87 in total

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