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cn_combo_scaffold_681

Alias: GEM22_17

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Displaying items 1-30 of 56 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_681_1
Caldilinea aerophila, Caldilinea, Caldilineales, Caldilineae, Chloroflexi, Bacteria

Not on your lists

comp(151..1542)
DNA (1392bp) protein (464aa)
Tryptophanase n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I1K0_CALAS
tnaA; tryptophanase
Tryptophanase {ECO:0000313|EMBL:BAL99137.1}; TaxID=926550 species="Bacteria; Chloroflexi; Caldilineae; Caldilineales; Caldilineaceae; Caldilinea.;" source="Caldilinea aerophila (strain DSM 14535 / JCM
cn_combo_scaffold_681_2
RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1608..2261
DNA (654bp) protein (218aa)
Transcriptional regulator, AraC family n=1 Tax=Chroococcidiopsis thermalis PCC 7203 RepID=K9TT93_9CYAN
AraC family transcriptional regulator Tax=RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated
AraC family transcriptional regulator
cn_combo_scaffold_681_3
Algoriphagus machipongonensis, Algoriphagus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

2411..5503
DNA (3093bp) protein (1031aa)
Glycosyl hydrolase, BNR repeat n=1 Tax=Algoriphagus machipongonensis RepID=A3HZW6_9BACT
Glycosyl hydrolase, BNR repeat {ECO:0000313|EMBL:EAZ80802.1}; TaxID=388413 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Algoriphagus.;" source="Algoriphagus machipong
BNR repeat-containing glycosyl hydrolase
cn_combo_scaffold_681_4
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

5530..7071
DNA (1542bp) protein (514aa)
Putative amino acid ABC transporter permease/substrate binding protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ACL6_GEMAT
putative amino acid ABC transporter permease/substrate binding protein
Putative amino acid ABC transporter permease/substrate binding protein {ECO:0000313|EMBL:BAH40243.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimona
cn_combo_scaffold_681_5
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

7068..7817
DNA (750bp) protein (250aa)
Putative amino acid ABC transporter ATP-binding protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ACL7_GEMAT
ABC transporter related protein rbh
ABC transporter related protein {ECO:0000313|EMBL:AHG92310.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
cn_combo_scaffold_681_6
Anaeromyxobacter sp. PSR-1, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7837..9009)
DNA (1173bp) protein (391aa)
Efflux transporter, RND family, MFP subunit n=1 Tax=Anaeromyxobacter sp. (strain K) RepID=B4UHV4_ANASK
Putative efflux system component YknX {ECO:0000313|EMBL:GAO04236.1}; TaxID=1300915 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaero
RND family efflux transporter MFP subunit
cn_combo_scaffold_681_7
Moorea producens, Moorea, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(9015..11387)
DNA (2373bp) protein (791aa)
hypothetical protein n=1 Tax=Pseudanabaena sp. PCC 6802 RepID=UPI00034631E3
ABC-type transport system, involved in lipoprotein release, permease component {ECO:0000313|EMBL:EGJ29527.1}; TaxID=489825 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Moo
lipoprotein release ABC transporter permease
cn_combo_scaffold_681_8
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(11381..12130)
DNA (750bp) protein (250aa)
ABC transporter n=1 Tax=Rhodanobacter denitrificans RepID=I4WE48_9GAMM
ABC transporter related protein
ABC transporter related protein {ECO:0000313|EMBL:AHG92600.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
cn_combo_scaffold_681_9
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(12414..14642)
DNA (2229bp) protein (743aa)
Isoquinoline 1-oxidoreductase, beta subunit n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4R9K0_PHEZH
aldehyde oxidase and xanthine dehydrogenase molybdopterin binding protein
Aldehyde oxidase and xanthine dehydrogenase molybdopterin binding protein {ECO:0000313|EMBL:AHG89703.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;
cn_combo_scaffold_681_10
RBG_16_Gammaproteobacteria_66_13_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14652..15158)
DNA (507bp) protein (169aa)
oxidoreductase; K07302 isoquinoline 1-oxidoreductase, alpha subunit [EC:1.3.99.16] Tax=RBG_16_Gammaproteobacteria_66_13_curated
Oxidoreductase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABT3_GEMAT
[2Fe-2S]-binding domain-containing protein
cn_combo_scaffold_681_11
unknown

Not on your lists

15337..15594
DNA (258bp) protein (86aa)

This feature has no annotations

cn_combo_scaffold_681_12
Hydrocarboniphaga effusa, Hydrocarboniphaga, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15604..17514)
DNA (1911bp) protein (637aa)
ATP-dependent DNA helicase RecQ id=4374705 bin=GWF2_Methylomirabilis_70_14 species=Plesiocystis pacifica genus=Plesiocystis taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ATP-dependent DNA helicase RecQ {ECO:0000313|EMBL:EIT69383.1}; TaxID=1172194 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Sinobacteraceae; Hydrocarboniphaga.;" source="Hydr
hypothetical protein
cn_combo_scaffold_681_13
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

17734..19527
DNA (1794bp) protein (598aa)
Peptidase M28A family protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7A0_GEMAT
peptidase M28A family protein
Peptidase M28A family protein {ECO:0000313|EMBL:BAH38110.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (str
cn_combo_scaffold_681_14
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(19622..21745)
DNA (2124bp) protein (708aa)
TonB-dependent outer membrane transport protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5B9_GEMAT
TonB-dependent outer membrane transport protein rbh
TonB-dependent outer membrane transport protein {ECO:0000313|EMBL:BAH37429.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimon
cn_combo_scaffold_681_15
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(21950..24367)
DNA (2418bp) protein (806aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01SG7_SOLUE
permease
Permease {ECO:0000313|EMBL:AHG88119.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
cn_combo_scaffold_681_16
unknown

Not on your lists

comp(24483..25010)
DNA (528bp) protein (176aa)

This feature has no annotations

cn_combo_scaffold_681_17
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(25321..28254)
DNA (2934bp) protein (978aa)
hypothetical protein n=1 Tax=unclassified Aminicenantes RepID=UPI000374B78D
Putative S9C family peptidase {ECO:0000313|EMBL:AHG91612.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
putative S9C family peptidase
cn_combo_scaffold_681_18
Pseudoalteromonas sp. OCN003, Pseudoalteromonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28410..29069)
DNA (660bp) protein (220aa)
Phospholipid/glycerol acyltransferase n=1 Tax=Pseudoalteromonas spongiae UST010723-006 RepID=U1M0Q5_9GAMM
acyltransferase
Acyltransferase {ECO:0000313|EMBL:AIY66860.1}; TaxID=1348114 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Pseudoalteromonadaceae; Pseudoalteromonas.;" source="Pseudoalterom
cn_combo_scaffold_681_19
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(29139..29384)
DNA (246bp) protein (82aa)
Translation initiation factor IF-1 n=1 Tax=Advenella kashmirensis (strain DSM 17095 / LMG 22695 / WT001) RepID=I3UCX1_ADVKW
Translation initiation factor IF-1
Translation initiation factor IF-1 {ECO:0000256|HAMAP-Rule:MF_00075}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
cn_combo_scaffold_681_20
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(29558..31039)
DNA (1482bp) protein (494aa)
Peptidase M28D family protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ACX3_GEMAT
peptidase M28D family protein
Peptidase M28D family protein {ECO:0000313|EMBL:BAH40350.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (str
cn_combo_scaffold_681_21
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31113..32360)
DNA (1248bp) protein (416aa)
Aminopeptidase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9FYC1_SORC5
dmpA; aminopeptidase
Aminopeptidase {ECO:0000313|EMBL:CAN95605.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum
cn_combo_scaffold_681_22
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(32473..33351)
DNA (879bp) protein (293aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAN7_GEMAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAH39835.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-
cn_combo_scaffold_681_23
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(33490..34671)
DNA (1182bp) protein (394aa)
Aminotransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9I6_GEMAT
aminotransferase rbh
Aminotransferase {ECO:0000313|EMBL:BAH39163.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DS
cn_combo_scaffold_681_24
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(34736..36262)
DNA (1527bp) protein (509aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Two-component histidine kinase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABQ3_GEMAT
ATP-binding region ATPase domain protein
cn_combo_scaffold_681_25
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(36267..37022)
DNA (756bp) protein (252aa)
OmpR family two-component response regulator n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAN0_GEMAT
response regulator receiver
Response regulator receiver {ECO:0000313|EMBL:AHG92379.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
cn_combo_scaffold_681_26
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(37114..39150)
DNA (2037bp) protein (679aa)
Phenylacetic acid degradation protein paaN n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SKB0_RHOMR
Phenylacetic acid degradation protein paaN {ECO:0000313|EMBL:AHG91243.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
phenylacetic acid degradation protein paaN
cn_combo_scaffold_681_27
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

39379..39903
DNA (525bp) protein (175aa)
Hypothetical membrane protein id=3055346 bin=GWA2_Methylomirabilis_73_35 species=16ft_combo_ws3 genus=16ft_combo_ws3 taxon_order=16ft_combo_ws3 taxon_class=16ft_combo_ws3 phylum=WS3 tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical membrane protein Tax=GWA2_Rokubacteria_73_35_curated
cn_combo_scaffold_681_28
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

40078..41820
DNA (1743bp) protein (581aa)
ggt; gamma-glutamyltranspeptidase precursor (EC:2.3.2.2); K00681 gamma-glutamyltranspeptidase [EC:2.3.2.2] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
ggt; gamma-glutamyltranspeptidase precursor (EC:2.3.2.2)
Gamma-glutamyltranspeptidase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAX1_GEMAT
cn_combo_scaffold_681_29
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(41891..42487)
DNA (597bp) protein (199aa)
Putative phenylacetic acid degradation protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A793_GEMAT
transferase hexapeptide repeat containing protein
Transferase hexapeptide repeat containing protein {ECO:0000313|EMBL:AHG91244.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
cn_combo_scaffold_681_30
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(42490..43704)
DNA (1215bp) protein (405aa)
paaJ; putative beta-ketoadipyl-CoA thiolase (EC:2.3.1.174)
Putative beta-ketoadipyl-CoA thiolase {ECO:0000313|EMBL:BAH38102.1}; EC=2.3.1.174 {ECO:0000313|EMBL:BAH38102.1};; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae;
Putative beta-ketoadipyl-CoA thiolase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A792_GEMAT
Displaying items 1-30 of 56 in total

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