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cn_combo_scaffold_774

Alias: GEM22_19

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Displaying items 1-30 of 79 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_774_1
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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1..747
DNA (747bp) protein (249aa)
hypothetical protein n=1 Tax=Armatimonadetes bacterium JGI 0000077-K19 RepID=UPI0003B4125B
peptidase M28 Tax=RBG_16_Gemmatimonadetes_66_8_curated
peptidase M28
cn_combo_scaffold_774_2
unknown

Not on your lists

comp(648..884)
DNA (237bp) protein (79aa)

This feature has no annotations

cn_combo_scaffold_774_3
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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890..1591
DNA (702bp) protein (234aa)
ComEA protein n=1 Tax=Dermabacter sp. HFH0086 RepID=S3Y9G6_9MICO
Helix-hairpin-helix DNA-binding class 1
Helix-hairpin-helix DNA-binding class 1 {ECO:0000313|EMBL:AHG91696.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
cn_combo_scaffold_774_4
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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1593..3473
DNA (1881bp) protein (627aa)
Type IV pilus assembly protein PilB n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AA14_GEMAT
pilB; type IV pilus assembly protein PilB rbh
Type IV pilus assembly protein PilB {ECO:0000313|EMBL:BAH39612.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiac
cn_combo_scaffold_774_5
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

3724..4872
DNA (1149bp) protein (383aa)
Twitching mobility protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AA13_GEMAT
pilT; twitching mobility protein rbh
Twitching mobility protein {ECO:0000313|EMBL:BAH39611.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain
cn_combo_scaffold_774_6
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

4913..6106
DNA (1194bp) protein (398aa)
Type IV pilus assembly protein PilC n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AA12_GEMAT
Type II secretion system F domain-containing protein
Type II secretion system F domain-containing protein {ECO:0000313|EMBL:AHG91693.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
cn_combo_scaffold_774_7
Rhodovulum sp. NI22, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6597..7820)
DNA (1224bp) protein (408aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5FD60_9RHIZ
ATPase AAA {ECO:0000313|EMBL:KGB83595.1}; TaxID=1469613 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. NI22.;"
P-loop NTPase domain-containing protein
cn_combo_scaffold_774_8
unknown

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comp(8376..8915)
DNA (540bp) protein (180aa)

This feature has no annotations

cn_combo_scaffold_774_9
unknown

Not on your lists

9125..9718
DNA (594bp) protein (198aa)

This feature has no annotations

cn_combo_scaffold_774_10
unknown

Not on your lists

9715..10155
DNA (441bp) protein (147aa)

This feature has no annotations

cn_combo_scaffold_774_11
unknown

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comp(10277..11227)
DNA (951bp) protein (317aa)

This feature has no annotations

cn_combo_scaffold_774_12
Oribacterium sp. oral taxon 078, Oribacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11515..14079
DNA (2565bp) protein (855aa)
Integrase core domain protein n=1 Tax=Oribacterium sp. oral taxon 078 str. F0263 RepID=U2TD01_9FIRM
Integrase core domain protein {ECO:0000313|EMBL:ERL04078.1}; TaxID=1321782 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Oribacterium.;" source="Oribacterium sp. oral taxo
transposase
cn_combo_scaffold_774_13
unknown

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14144..15451
DNA (1308bp) protein (436aa)

This feature has no annotations

cn_combo_scaffold_774_14
unknown

Not on your lists

15559..17457
DNA (1899bp) protein (633aa)

This feature has no annotations

cn_combo_scaffold_774_15

Not on your lists

comp(17721..18743)
DNA (1023bp) protein (341aa)
Iron permease FTR1 n=1 Tax=mine drainage metagenome RepID=E6PXX2_9ZZZZ
Iron permease FTR1 {ECO:0000313|EMBL:CBH99781.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
FTR1 family protein
cn_combo_scaffold_774_16
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(18868..22116)
DNA (3249bp) protein (1083aa)
Cation efflux protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7Z0_GEMAT
Cation efflux protein {ECO:0000313|EMBL:BAH38350.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27
cation efflux protein
cn_combo_scaffold_774_17
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(22124..23395)
DNA (1272bp) protein (424aa)
Putative cation efflux protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7Z1_GEMAT
putative cation efflux protein
Putative cation efflux protein {ECO:0000313|EMBL:BAH38351.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (st
cn_combo_scaffold_774_18
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(23385..24521)
DNA (1137bp) protein (379aa)
Putative outer membrane efflux protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7Z2_GEMAT
putative outer membrane efflux protein rbh
Putative outer membrane efflux protein {ECO:0000313|EMBL:BAH38352.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurant
cn_combo_scaffold_774_19
unknown

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comp(24967..25356)
DNA (390bp) protein (130aa)

This feature has no annotations

cn_combo_scaffold_774_20
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

25513..26001
DNA (489bp) protein (163aa)
ArsR family transcriptional regulator n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7Z3_GEMAT
ArsR family transcriptional regulator
ArsR family transcriptional regulator {ECO:0000313|EMBL:BAH38353.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas auranti
cn_combo_scaffold_774_21
RBG_16_Chloroflexi_54_18_curated, Chloroflexi, Bacteria

Not on your lists

26053..28230
DNA (2178bp) protein (726aa)
heavy metal translocating P-type ATPase; K01534 Cd2+/Zn2+-exporting ATPase [EC:3.6.3.3 3.6.3.5] Tax=RBG_16_Chloroflexi_54_18_curated
hypothetical protein n=1 Tax=Gracilimonas tropica RepID=UPI0003706346
heavy metal translocating P-type ATPase
cn_combo_scaffold_774_22
CG_Delta_02, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28245..29162
DNA (918bp) protein (306aa)
prolipoprotein diacylglyceryl transferase Tax=CG_Delta_02
Prolipoprotein diacylglyceryl transferase id=1791675 bin=GWB2_Deltaproteobacteria_65_81 species=Haliangium ochraceum genus=Haliangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Deltaproteobacteria_65_81 organism_group=Deltaproteobacteria organism_desc=Good +
prolipoprotein diacylglyceryl transferase
cn_combo_scaffold_774_23
RBG_19FT_COMBO_Chloroflexi_47_15_curated, Chloroflexi, Bacteria

Not on your lists

comp(29569..29811)
DNA (243bp) protein (81aa)
NH(3)-dependent NAD(+) synthetase (EC:6.3.1.5); K01916 NAD+ synthase [EC:6.3.1.5] Tax=RBG_19FT_COMBO_Chloroflexi_47_15_curated
NH(3)-dependent NAD(+) synthetase n=1 Tax=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) RepID=NADE_CARHZ
nadE; NAD+ synthetase
cn_combo_scaffold_774_24
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(29750..30091)
DNA (342bp) protein (114aa)
Peptidoglycan binding domain protein n=1 Tax=Salinisphaera shabanensis E1L3A RepID=U2FWU9_9GAMM
ErfK/YbiS/YcfS/YnhG family protein
ErfK/YbiS/YcfS/YnhG family protein {ECO:0000313|EMBL:AHG89531.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
cn_combo_scaffold_774_25

Not on your lists

30343..30708
DNA (366bp) protein (122aa)
Marine sediment metagenome DNA, contig: S01H1_S30685 {ECO:0000313|EMBL:GAG32936.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
Helix-turn-helix domain protein id=4196320 bin=GWF2_Lentisphaerae_49_21 species=Desulfobacca acetoxidans genus=Desulfobacca taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Lentisphaerae_49_21 organism_group=Lentisphaerae organism_desc=Very large genome: good +
helix-turn-helix domain-containing protein
cn_combo_scaffold_774_26
unknown

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30792..31127
DNA (336bp) protein (112aa)

This feature has no annotations

cn_combo_scaffold_774_27
unknown

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comp(31277..31846)
DNA (570bp) protein (190aa)

This feature has no annotations

cn_combo_scaffold_774_28
unknown

Not on your lists

32105..34732
DNA (2628bp) protein (876aa)

This feature has no annotations

cn_combo_scaffold_774_29
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35030..35449)
DNA (420bp) protein (140aa)
Putative uncharacterized protein n=1 Tax=Vibrio mimicus VM223 RepID=D0HAS0_VIBMI
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
hypothetical protein
cn_combo_scaffold_774_30
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(35458..36171)
DNA (714bp) protein (238aa)
hypothetical protein n=1 Tax=Pseudoalteromonas ruthenica RepID=UPI00034B60D2
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
hypothetical protein
Displaying items 1-30 of 79 in total

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