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cn_combo_scaffold_2076

Alias: GEM22_44

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Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_2076_1
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(14..628)
DNA (615bp) protein (205aa)
Aromatic acid decarboxylase {ECO:0000256|RuleBase:RU362054}; EC=4.1.1.- {ECO:0000256|RuleBase:RU362054};; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.
Aromatic acid decarboxylase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AB74_GEMAT
3-octaprenyl-4-hydroxybenzoate carboxy-lyase
cn_combo_scaffold_2076_2
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(625..1578)
DNA (954bp) protein (318aa)
4-hydroxybenzoate octaprenyltransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AB75_GEMAT
4-hydroxybenzoate polyprenyltransferase
4-hydroxybenzoate polyprenyltransferase {ECO:0000313|EMBL:AHG91442.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
cn_combo_scaffold_2076_3
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(1575..3092)
DNA (1518bp) protein (506aa)
3-octaprenyl-4-hydroxybenzoate carboxy-lyase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AB76_GEMAT
menaquinone biosynthesis decarboxylase, SCO4490 family rbh
Menaquinone biosynthesis decarboxylase, SCO4490 family {ECO:0000313|EMBL:AHG91443.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
cn_combo_scaffold_2076_4
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(3089..3835)
DNA (747bp) protein (249aa)
Demethylmenaquinone methyltransferase {ECO:0000256|HAMAP-Rule:MF_01813}; EC=2.1.1.163 {ECO:0000256|HAMAP-Rule:MF_01813};; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes b
Demethylmenaquinone methyltransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AB77_GEMAT
Ubiquinone/menaquinone biosynthesis methyltransferase ubiE
cn_combo_scaffold_2076_5
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

3967..4569
DNA (603bp) protein (201aa)
RNA polymerase sigma factor n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AB78_GEMAT
RNA polymerase sigma factor, sigma-70 family
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
cn_combo_scaffold_2076_6
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

4685..5209
DNA (525bp) protein (175aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AB79_GEMAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG91446.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
cn_combo_scaffold_2076_7
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

5211..6419
DNA (1209bp) protein (403aa)
Hypothetical membrane protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AB80_GEMAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG91447.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
cn_combo_scaffold_2076_8
RBG_13_Planctomycetes_62_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

comp(6463..7008)
DNA (546bp) protein (182aa)
transcription activator, effector binding Tax=RBG_13_Planctomycetes_62_9_curated
cn_combo_scaffold_2076_9
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

7501..10512
DNA (3012bp) protein (1004aa)
Putative outer membrane protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABA6_GEMAT
Putative outer membrane protein {ECO:0000313|EMBL:BAH39512.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (s
putative outer membrane protein rbh
cn_combo_scaffold_2076_10
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

10515..11816
DNA (1302bp) protein (434aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABA5_GEMAT
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:BAH39511.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-
cn_combo_scaffold_2076_11
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(11947..13482)
DNA (1536bp) protein (512aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7Q3_GEMAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAH38263.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-
cn_combo_scaffold_2076_12
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13699..14163)
DNA (465bp) protein (155aa)
Uncharacterized protein n=1 Tax=Clostridium ultunense Esp RepID=M1ZB81_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCQ95033.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunense Esp.;"
hypothetical protein
cn_combo_scaffold_2076_13
unknown

Not on your lists

14483..15124
DNA (642bp) protein (214aa)

This feature has no annotations

cn_combo_scaffold_2076_14
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

15447..18434
DNA (2988bp) protein (996aa)
TonB-dependent outer membrane receptor n=1 Tax=Gramella forsetii (strain KT0803) RepID=A0M0T4_GRAFK
TonB-dependent outer membrane protein, SusC/RagA
TonB-dependent outer membrane protein, SusC/RagA {ECO:0000313|EMBL:AHG89359.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
cn_combo_scaffold_2076_15
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

18467..19795
DNA (1329bp) protein (443aa)
Membrane or secreted protein n=1 Tax=Gramella forsetii (strain KT0803) RepID=A0M0T5_GRAFK
RagB/SusD domain-containing protein rbh
RagB/SusD domain-containing protein {ECO:0000313|EMBL:AHG89360.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
cn_combo_scaffold_2076_16
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(19912..20670)
DNA (759bp) protein (253aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AB82_GEMAT
protein of unknown function DUF62
Uncharacterized protein {ECO:0000313|EMBL:AHG91450.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
cn_combo_scaffold_2076_17
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(20670..22106)
DNA (1437bp) protein (479aa)
MATE efflux family protein n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XU31_9BACT
MATE efflux family protein
MATE efflux family protein {ECO:0000313|EMBL:AHG91451.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
cn_combo_scaffold_2076_18
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(22103..23230)
DNA (1128bp) protein (376aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AB84_GEMAT
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:BAH39490.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-
cn_combo_scaffold_2076_19
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(23285..24358)
DNA (1074bp) protein (358aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AB85_GEMAT
phosphoesterase RecJ domain protein
Phosphoesterase RecJ domain protein {ECO:0000313|EMBL:AHG91453.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
cn_combo_scaffold_2076_20
Myxococcus stipitatus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24428..25903)
DNA (1476bp) protein (492aa)
Amino acid permease n=1 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7UAV9_MYXSD
amino acid permease rbh
Amino acid permease {ECO:0000313|EMBL:AGC44975.1}; TaxID=1278073 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus
cn_combo_scaffold_2076_21
unknown

Not on your lists

comp(26125..27192)
DNA (1068bp) protein (356aa)

This feature has no annotations

cn_combo_scaffold_2076_22
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(27366..28913)
DNA (1548bp) protein (516aa)
Inosine-5'-monophosphate dehydrogenase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AB87_GEMAT
IMP dehydrogenase
Inosine-5'-monophosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01964, ECO:0000256|RuleBase:RU003928}; Short=IMP dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01964};; Short=IMPD {ECO:0000256|HAMAP-Rule:
cn_combo_scaffold_2076_23
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(28993..29499)
DNA (507bp) protein (169aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AB89_GEMAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG91457.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
cn_combo_scaffold_2076_24
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(29734..30762)
DNA (1029bp) protein (343aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AB90_GEMAT
Peptidase M15A
Peptidase M15A {ECO:0000313|EMBL:AHG91458.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
cn_combo_scaffold_2076_25
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(30768..31697)
DNA (930bp) protein (310aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AB91_GEMAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAH39497.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-
cn_combo_scaffold_2076_26
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(31905..32762)
DNA (858bp) protein (286aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AB92_GEMAT
hypothetical protein Tax=RBG_16_Acidobacteria_70_10_curated
hypothetical protein
cn_combo_scaffold_2076_27
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(32759..33553)
DNA (795bp) protein (265aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AB93_GEMAT
hypothetical protein Tax=RBG_16_Acidobacteria_70_10_curated
hypothetical protein
cn_combo_scaffold_2076_28
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

33619..35076
DNA (1458bp) protein (486aa)
2,3-bisphosphoglycerate-independent phosphoglycerate mutase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AB94_GEMAT
2,3-bisphosphoglycerate-independent phosphoglycerate mutase
2,3-bisphosphoglycerate-independent phosphoglycerate mutase {ECO:0000256|HAMAP-Rule:MF_01038, ECO:0000256|SAAS:SAAS00058362}; Short=BPG-independent PGAM {ECO:0000256|HAMAP-Rule:MF_01038};; Short=Phosp
cn_combo_scaffold_2076_29
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

35089..35781
DNA (693bp) protein (231aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AB95_GEMAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG91460.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
cn_combo_scaffold_2076_30
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

35783..36205
DNA (423bp) protein (141aa)
6-pyruvoyl tetrahydropterin synthase family protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AB96_GEMAT
6-pyruvoyl tetrahydropterin synthase family protein
6-pyruvoyl tetrahydropterin synthase family protein {ECO:0000313|EMBL:BAH39502.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmat
Displaying items 1-30 of 32 in total

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