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cn_combo_scaffold_2595

Alias: GEM22_50

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_2595_1
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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2..970
DNA (969bp) protein (323aa)
ABC transporter-related protein n=1 Tax=Chloroherpeton thalassium (strain ATCC 35110 / GB-78) RepID=B3QZ85_CHLT3
ABC transporter related protein
ABC transporter related protein {ECO:0000313|EMBL:AHG89314.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
cn_combo_scaffold_2595_2
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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967..1701
DNA (735bp) protein (245aa)
ABC transporter-related protein n=1 Tax=Chloroherpeton thalassium (strain ATCC 35110 / GB-78) RepID=B3QZ84_CHLT3
ABC transporter related protein
ABC transporter related protein {ECO:0000313|EMBL:AHG89313.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
cn_combo_scaffold_2595_3
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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1698..2801
DNA (1104bp) protein (368aa)
ABC-2 type transporter n=1 Tax=Chloroherpeton thalassium (strain ATCC 35110 / GB-78) RepID=B3QZ83_CHLT3
ABC-2 type transporter
ABC-2 type transporter {ECO:0000313|EMBL:AHG89312.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
cn_combo_scaffold_2595_4
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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2805..3932
DNA (1128bp) protein (376aa)
ABC-2 type transporter n=1 Tax=Prosthecochloris vibrioformis (strain DSM 265) RepID=A4SEG9_PROVI
putative ABC transport system, membrane protein
Putative ABC transport system, membrane protein {ECO:0000313|EMBL:AHG89311.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
cn_combo_scaffold_2595_5
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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4121..5416
DNA (1296bp) protein (432aa)
purA; adenylosuccinate synthetase (EC:6.3.4.4) rbh
Adenylosuccinate synthetase {ECO:0000256|HAMAP-Rule:MF_00011, ECO:0000256|RuleBase:RU000520}; Short=AMPSase {ECO:0000256|HAMAP-Rule:MF_00011};; Short=AdSS {ECO:0000256|HAMAP-Rule:MF_00011};; EC=6.3.4.
Adenylosuccinate synthetase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6T9_GEMAT
cn_combo_scaffold_2595_6
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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5420..6451
DNA (1032bp) protein (344aa)
Putative oxidoreductase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6U0_GEMAT
Bacillithiol biosynthesis thiol disulfide oxidoreductase, YpdA
Bacillithiol biosynthesis thiol disulfide oxidoreductase, YpdA {ECO:0000313|EMBL:AHG90345.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
cn_combo_scaffold_2595_7
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

6521..7504
DNA (984bp) protein (328aa)
Zn-dependent hydrolase n=1 Tax=Congregibacter litoralis KT71 RepID=A4A4Y0_9GAMM
beta-lactamase domain protein
Beta-lactamase domain protein {ECO:0000313|EMBL:AHG92455.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
cn_combo_scaffold_2595_8
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists


7761..9110
DNA (1350bp) protein (450aa)
Glycine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00253, ECO:0000256|SAAS:SAAS00006545}; EC=6.1.1.14 {ECO:0000256|HAMAP-Rule:MF_00253, ECO:0000256|SAAS:SAAS00015978};; Glycyl-tRNA synthetase {ECO:000025
Glycine--tRNA ligase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6U1_GEMAT
Glycine-tRNA ligase, bacterial
cn_combo_scaffold_2595_9
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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9267..11543
DNA (2277bp) protein (759aa)
Uncharacterized protein n=1 Tax=Fibrisoma limi BUZ 3 RepID=I2GMH8_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CCH55106.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
hypothetical protein
cn_combo_scaffold_2595_10
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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11636..12955
DNA (1320bp) protein (440aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Signal transduction histidine kinase, LytS n=1 Tax=Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399) RepID=D2PNH5_KRIFD
histidine kinase internal region
cn_combo_scaffold_2595_11
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

12948..13790
DNA (843bp) protein (281aa)
Two-component response regulator n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABW9_GEMAT
LytTr DNA-binding region
LytTr DNA-binding region {ECO:0000313|EMBL:AHG93644.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
cn_combo_scaffold_2595_12
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

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comp(13870..14502)
DNA (633bp) protein (211aa)
Putative two-component response regulator n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I1B7_CALAS
two component LuxR family transcriptional regulator Tax=RBG_16_Chloroflexi_63_12_curated
putative two-component response regulator
cn_combo_scaffold_2595_13
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

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comp(14499..15140)
DNA (642bp) protein (214aa)
Histidine kinase n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=A5UYD5_ROSS1
histidine kinase
histidine kinase Tax=RBG_16_Chloroflexi_63_12_curated
cn_combo_scaffold_2595_14

Not on your lists

15383..16747
DNA (1365bp) protein (455aa)
peptidase M20 id=1249849 bin=RBG1 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=RBG1 organism_group=Zixibacteria
Peptidase M20 {ECO:0000313|EMBL:EQB62712.1}; TaxID=1379698 species="Bacteria.;" source="candidate division Zixibacteria bacterium RBG-1.;"
putative M20A family peptidase
cn_combo_scaffold_2595_15
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

16844..17521
DNA (678bp) protein (226aa)
Putative oxidoreductase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6U3_GEMAT
short-chain dehydrogenase/reductase SDR
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:AHG90352.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
cn_combo_scaffold_2595_16
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

17694..18983
DNA (1290bp) protein (430aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6U4_GEMAT
ATP-binding region ATPase domain protein
cn_combo_scaffold_2595_17
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

18991..19278
DNA (288bp) protein (96aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6U5_GEMAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG90354.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
cn_combo_scaffold_2595_18
unknown

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19275..19604
DNA (330bp) protein (110aa)

This feature has no annotations

cn_combo_scaffold_2595_19
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

19661..21463
DNA (1803bp) protein (601aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6U7_GEMAT
ATPase associated with various cellular activities AAA_3
ATPase associated with various cellular activities AAA_3 {ECO:0000313|EMBL:AHG88057.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Displaying 19 items

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