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cn_combo_scaffold_2940

Alias: GEM22_51

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_2940_1
unknown

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3..1454
DNA (1452bp) protein (484aa)

This feature has no annotations

cn_combo_scaffold_2940_trna_5
unknown

Not on your lists

comp(1625..1698)
DNA (74bp)
transferRNA
cn_combo_scaffold_2940_trna_4
unknown

Not on your lists

comp(1725..1798)
DNA (74bp)
transferRNA
cn_combo_scaffold_2940_trna_3
unknown

Not on your lists

comp(1991..2064)
DNA (74bp)
transferRNA
cn_combo_scaffold_2940_trna_2
unknown

Not on your lists

comp(2173..2245)
DNA (73bp)
transferRNA
cn_combo_scaffold_2940_trna_1
unknown

Not on your lists

comp(2337..2409)
DNA (73bp)
transferRNA
cn_combo_scaffold_2940_2
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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2650..3537
DNA (888bp) protein (296aa)
RNA polymerase sigma factor n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A692_GEMAT
RNA polymerase sigma factor
RNA polymerase sigma factor {ECO:0000313|EMBL:BAH37752.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strai
cn_combo_scaffold_2940_3
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

3721..4476
DNA (756bp) protein (252aa)
Putative ABC transporter ATP-binding protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A693_GEMAT
ABC transporter related protein
ABC transporter related protein {ECO:0000313|EMBL:AHG90162.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
cn_combo_scaffold_2940_4
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

4480..4932
DNA (453bp) protein (151aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A694_GEMAT
NUDIX hydrolase
NUDIX hydrolase {ECO:0000313|EMBL:AHG90163.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
cn_combo_scaffold_2940_5
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

4937..5773
DNA (837bp) protein (279aa)
AraC family transcriptional regulator n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A695_GEMAT
AraC family transcriptional regulator
AraC family transcriptional regulator {ECO:0000313|EMBL:BAH37755.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas auranti
cn_combo_scaffold_2940_6
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

5911..7479
DNA (1569bp) protein (523aa)
ATP synthase subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_01346};; ATP synthase F1 sector subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; F-ATPase subunit a
ATP synthase subunit alpha n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A696_GEMAT
ATP synthase subunit alpha
cn_combo_scaffold_2940_7
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

7524..8384
DNA (861bp) protein (287aa)
ATP synthase gamma chain n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=ATPG_GEMAT
ATP synthase gamma chain
ATP synthase gamma chain {ECO:0000256|HAMAP-Rule:MF_00815}; ATP synthase F1 sector gamma subunit {ECO:0000256|HAMAP-Rule:MF_00815}; F-ATPase gamma subunit {ECO:0000256|HAMAP-Rule:MF_00815}; TaxID=8612
cn_combo_scaffold_2940_8
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

8531..9964
DNA (1434bp) protein (478aa)
atpD; ATP synthase beta chain (EC:3.6.3.14)
ATP synthase subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_01347};; ATP synthase F1 sector subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; F-ATPase subunit bet
ATP synthase subunit beta n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A698_GEMAT
cn_combo_scaffold_2940_9
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

9967..10218
DNA (252bp) protein (84aa)
ATP synthase epsilon chain n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A699_GEMAT
ATPase, F1 complex, delta/epsilon subunit
ATPase, F1 complex, delta/epsilon subunit {ECO:0000313|EMBL:AHG90167.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
cn_combo_scaffold_2940_10
RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated, Acidobacteria, Bacteria

Not on your lists

10247..12067
DNA (1821bp) protein (607aa)
Putative carbamoyl transferase; K00612 carbamoyltransferase [EC:2.1.3.-] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated
Carbamoyltransferase
Carbamoyltransferase id=4982232 bin=GWA2_Elusimicrobia_66_18 species=Desulfarculus baarsii genus=Desulfarculus taxon_order=Desulfarculales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
cn_combo_scaffold_2940_11
RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated, Acidobacteria, Bacteria

Not on your lists

12040..12453
DNA (414bp) protein (138aa)
hypothetical protein n=1 Tax=Methylosinus sp. LW4 RepID=UPI00036F02A5
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated
hypothetical protein
cn_combo_scaffold_2940_12
Melioribacter roseus, Melioribacter, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

12476..12628
DNA (153bp) protein (51aa)
Uncharacterized protein n=1 Tax=Melioribacter roseus (strain P3M) RepID=I6YWB8_MELRP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFN74877.1}; TaxID=1191523 species="Bacteria; Ignavibacteriae; Ignavibacteria; Ignavibacteriales; Melioribacteraceae; Melioribacter.;" source="Melioribacter r
cn_combo_scaffold_2940_13
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

12784..14583
DNA (1800bp) protein (600aa)
hypothetical protein n=1 Tax=Gracilimonas tropica RepID=UPI00036E1E7F
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AHG91994.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
cn_combo_scaffold_2940_14
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

14728..15852
DNA (1125bp) protein (375aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAW0_GEMAT
TonB family protein
TonB family protein {ECO:0000313|EMBL:AHG89250.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
cn_combo_scaffold_2940_15
RBG_13_Bacteroidetes_43_22_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16239..19355
DNA (3117bp) protein (1039aa)
hypothetical protein n=1 Tax=Balneola vulgaris RepID=UPI0003782CED
tonb-dependent receptor Tax=RBG_13_Bacteroidetes_43_22_curated
tonb-dependent receptor plug
cn_combo_scaffold_2940_16
Marivirga tractuosa, Marivirga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

19382..20956
DNA (1575bp) protein (525aa)
Uncharacterized protein n=1 Tax=Marivirga tractuosa (strain ATCC 23168 / DSM 4126 / NBRC 15989 / NCIMB 1408 / VKM B-1430 / H-43) RepID=E4TSE0_MARTH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADR22857.1}; Flags: Precursor;; TaxID=643867 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; Marivirga.;" source="Marivirga trac
cn_combo_scaffold_2940_17
unknown

Not on your lists

comp(21086..21586)
DNA (501bp) protein (167aa)

This feature has no annotations

cn_combo_scaffold_2940_18
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

22037..22747
DNA (711bp) protein (237aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6A1_GEMAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG90173.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Displaying 23 items

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