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cn_combo_scaffold_4096

Alias: GEM22_59

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_4096_1
Phaeodactylibacter xiamenensis, Phaeodactylibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(108..959)
DNA (852bp) protein (284aa)
hypothetical protein n=1 Tax=gamma proteobacterium SCGC AB-629-K02 RepID=UPI000365E851
Short-chain dehydrogenase {ECO:0000313|EMBL:KGE89638.1}; TaxID=1524460 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Phaeodactylibacter.;" source="Phaeodactyl
dehydrogenase
cn_combo_scaffold_4096_2
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

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comp(984..2840)
DNA (1857bp) protein (619aa)
putative hydrolase; K06978 Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
hydrolase CocE/NonD family protein
putative hydrolase; K06978 id=16796937 bin=RBG_16_Aminicenantes_66_30 species=Gemmatimonas aurantiaca genus=Gemmatimonas taxon_order=Gemmatimonadales taxon_class=Gemmatimonadetes phylum=Gemmatimonadetes tax=RBG_16_Aminicenantes_66_30 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
cn_combo_scaffold_4096_3

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comp(2981..3355)
DNA (375bp) protein (125aa)
Endoribonuclease L-PSP n=1 Tax=Desulfovibrio desulfuricans ND132 RepID=F0JBU5_DESDE
Endoribonuclease L-PSP {ECO:0000313|EMBL:AIA15848.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
endoribonuclease L-PSP
cn_combo_scaffold_4096_4
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(3370..4704)
DNA (1335bp) protein (445aa)
Fumarylacetoacetase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5H0_GEMAT
fumarylacetoacetase
Fumarylacetoacetase {ECO:0000313|EMBL:AHG89866.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
cn_combo_scaffold_4096_5
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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comp(4708..5640)
DNA (933bp) protein (311aa)
Putative uncharacterized protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IQ43_KORVE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABF41007.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strai
cn_combo_scaffold_4096_6
Hyalangium minutum, Hyalangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(5637..6479)
DNA (843bp) protein (281aa)
Histone-lysine N-methyltransferase, H3 lysine-4 specific n=2 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=Q092R0_STIAD
SET domain protein {ECO:0000313|EMBL:KFE71918.1}; TaxID=394096 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Hyalangium.;" source="Hyalangiu
set domain-containing protein
cn_combo_scaffold_4096_7
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(6482..6928)
DNA (447bp) protein (149aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ACP9_GEMAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAH40276.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-
cn_combo_scaffold_4096_8
unknown

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comp(7158..7760)
DNA (603bp) protein (201aa)

This feature has no annotations

cn_combo_scaffold_4096_9
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(7963..8520)
DNA (558bp) protein (186aa)
Fructose-2,6-bisphosphatase n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4R849_PHEZH
Phosphoglycerate mutase
Phosphoglycerate mutase {ECO:0000313|EMBL:AHG88922.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
cn_combo_scaffold_4096_10
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(8613..9143)
DNA (531bp) protein (177aa)
Putative metal-dependent hydrolase Deipe_3075 n=1 Tax=Deinococcus peraridilitoris (strain DSM 19664 / LMG 22246 / CIP 109416 / KR-200) RepID=L0A510_DEIPD
DinB-like domain protein
DinB-like domain protein {ECO:0000313|EMBL:AHG89101.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
cn_combo_scaffold_4096_11
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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9294..10196
DNA (903bp) protein (301aa)
dppA; D-aminopeptidase (EC:3.4.11.-); K02035 peptide/nickel transport system substrate-binding protein id=12554608 bin=CNBR_ACIDO species=Gemmatimonas aurantiaca genus=Gemmatimonas taxon_order=Gemmatimonadales taxon_class=Gemmatimonadetes phylum=Gemmatimonadetes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
dppA; D-aminopeptidase (EC:3.4.11.-); K02035 peptide/nickel transport system substrate-binding protein Tax=GWC2_Gemmatimonadetes_71_10_curated
dppA; D-aminopeptidase (EC:3.4.11.-)
cn_combo_scaffold_4096_12
Herpetosiphon aurantiacus, Herpetosiphon, Herpetosiphonales, Chloroflexia, Chloroflexi, Bacteria

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10320..11135
DNA (816bp) protein (272aa)
Integral membrane protein TerC n=1 Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=A9B166_HERA2
integral membrane protein TerC
Integral membrane protein TerC {ECO:0000313|EMBL:ABX05344.1}; TaxID=316274 species="Bacteria; Chloroflexi; Chloroflexia; Herpetosiphonales; Herpetosiphonaceae; Herpetosiphon.;" source="Herpetosiphon a
cn_combo_scaffold_4096_13
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(11143..11871)
DNA (729bp) protein (243aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ADS5_GEMAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAH40652.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-
cn_combo_scaffold_4096_14
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(11997..12530)
DNA (534bp) protein (178aa)
Putative uncharacterized protein n=1 Tax=uncultured bacterium 70 RepID=E3T6J5_9BACT
DinB-like domain protein
DinB-like domain protein {ECO:0000313|EMBL:AHG89040.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
cn_combo_scaffold_4096_15
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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comp(12527..13126)
DNA (600bp) protein (200aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q027H9_SOLUE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABJ82834.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatu
cn_combo_scaffold_4096_16
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(13126..13806)
DNA (681bp) protein (227aa)
Hypothetical membrane protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ACB9_GEMAT
hypothetical membrane protein
Hypothetical membrane protein {ECO:0000313|EMBL:BAH40146.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (str
cn_combo_scaffold_4096_17
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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13868..14302
DNA (435bp) protein (145aa)
TonB-dependent receptor-like protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IR59_9SPHN
TonB-dependent receptor-like protein
TonB-dependent receptor-like protein {ECO:0000313|EMBL:BAK68425.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sph
Displaying 17 items

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