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cn_combo_scaffold_2303

Alias: GEM22_75

Search features with annotation key words

Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_2303_1
GWF2_WOR_2_43_52_curated, WOR-2, Bacteria

Not on your lists

comp(10..345)
DNA (336bp) protein (112aa)
ATPase AAA-2 domain protein id=4012237 bin=GWF2_OP3_43_52 species=Singulisphaera acidiphila genus=Singulisphaera taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
chaperone ATPase Tax=GWF2_WOR_2_43_52_curated
chaperone ATPase
cn_combo_scaffold_2303_2
RBG_16_Deltaproteobacteria_71_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(350..700)
DNA (351bp) protein (117aa)
Type I restriction-modification system methyltransferase subunit n=1 Tax=Cyanobium gracile (strain ATCC 27147 / PCC 6307) RepID=K9P6P4_CYAGP
type I restriction-modification system methyltransferase subunit Tax=RBG_16_Deltaproteobacteria_71_12_curated
type I restriction-modification system methyltransferase subunit
cn_combo_scaffold_2303_3
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1056..1766)
DNA (711bp) protein (237aa)
Putative phage-related protein n=1 Tax=Stenotrophomonas maltophilia (strain R551-3) PF7_STRM5">RepID=B4SPF7_STRM5
putative phage-like protein
Putative phage-related protein {ECO:0000313|EMBL:ACF53739.1}; TaxID=391008 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas
cn_combo_scaffold_2303_4
GWA2_RIF03_38_11_curated, RIF3, Bacteria

Not on your lists

1795..2079
DNA (285bp) protein (95aa)
hypothetical protein n=1 Tax=Acidovorax radicis RepID=UPI0002375201
hypothetical protein Tax=GWA2_RIF03_38_11_curated
hypothetical protein
cn_combo_scaffold_2303_5
RBG_13_Chloroflexi_50_10_curated, Chloroflexi, Bacteria

Not on your lists

2081..3343
DNA (1263bp) protein (421aa)
transcriptional regulator n=1 Tax=Aureimonas ureilytica RepID=UPI00036AB658
transcription regulator with HTH domain Tax=RBG_13_Chloroflexi_50_10_curated
hypothetical protein
cn_combo_scaffold_2303_6
RBG_13_Chloroflexi_50_10_curated, Chloroflexi, Bacteria

Not on your lists

3336..4490
DNA (1155bp) protein (385aa)
Uncharacterized protein n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IDH3_XANP2
hypothetical protein
hypothetical protein Tax=RBG_13_Chloroflexi_50_10_curated
cn_combo_scaffold_2303_7
unknown

Not on your lists

comp(4707..5738)
DNA (1032bp) protein (344aa)
hypothetical protein
cn_combo_scaffold_2303_8
Pelobacter carbinolicus, Pelobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5936..6313
DNA (378bp) protein (126aa)
DNA-binding protein of ISPca7 n=1 Tax=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) RepID=Q3A4V7_PELCD
DNA-binding protein of ISPca7
DNA-binding protein of ISPca7 {ECO:0000313|EMBL:ABA88600.1}; TaxID=338963 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Pelobacteraceae; Pelobacter.;" source="Pelobacter
cn_combo_scaffold_2303_9

Not on your lists

6325..7302
DNA (978bp) protein (326aa)
Transposase of ISPca7 n=1 Tax=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) RepID=Q3A4T0_PELCD
Uncharacterized protein {ECO:0000313|EMBL:KKL57896.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
transposase of ISPca7
cn_combo_scaffold_2303_10
unknown

Not on your lists

8080..9333
DNA (1254bp) protein (418aa)

This feature has no annotations

cn_combo_scaffold_2303_11
unknown

Not on your lists

9723..9944
DNA (222bp) protein (74aa)

This feature has no annotations

cn_combo_scaffold_2303_12
unknown

Not on your lists

9944..10117
DNA (174bp) protein (58aa)

This feature has no annotations

cn_combo_scaffold_2303_13
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10209..10460)
DNA (252bp) protein (84aa)
4-oxalocrotonate tautomerase n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GPM4_SPHAL
4-oxalocrotonate tautomerase Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
4-oxalocrotonate tautomerase
cn_combo_scaffold_2303_14
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

10779..11495
DNA (717bp) protein (239aa)
ABC efflux pump, inner membrane subunit n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IUS6_KORVE
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
efflux ABC transporter inner membrane protein
cn_combo_scaffold_2303_15
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

11608..12492
DNA (885bp) protein (295aa)
Permease n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZXW4_OPITP
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
permease
cn_combo_scaffold_2303_16
Chlorobium chlorochromatii, Chlorobium, Chlorobiales, Chlorobia, Chlorobi, Bacteria

Not on your lists

comp(12547..13866)
DNA (1320bp) protein (440aa)
Putative uncharacterized protein n=1 Tax=Chlorobium chlorochromatii (strain CaD3) RepID=Q3APW5_CHLCH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABB28960.1}; TaxID=340177 species="Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae; Chlorobium/Pelodictyon group; Chlorobium.;" source="Chlorobium
cn_combo_scaffold_2303_17
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

14056..14418
DNA (363bp) protein (121aa)
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
cn_combo_scaffold_2303_18
Acetobacteraceae bacterium AT-5844, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14498..15577)
DNA (1080bp) protein (360aa)
Oxidoreductase, LLM family n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=H0A331_9PROT
Oxidoreductase, LLM family {ECO:0000313|EMBL:EHL99461.1}; TaxID=1054213 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae.;" sou
oxidoreductase
cn_combo_scaffold_2303_19
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15786..17024
DNA (1239bp) protein (413aa)
Phospho-2-dehydro-3-deoxyheptonate aldolase {ECO:0000256|PIRNR:PIRNR001361}; EC=2.5.1.54 {ECO:0000256|PIRNR:PIRNR001361};; 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase {ECO:0000256|PIRNR:PIRNR
phospho-2-dehydro-3-deoxyheptonate aldolase (EC:2.5.1.54)
Phospho-2-dehydro-3-deoxyheptonate aldolase n=1 Tax=Variovorax sp. CF313 RepID=J3CX89_9BURK
cn_combo_scaffold_2303_20
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(17077..17745)
DNA (669bp) protein (223aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG87965.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
cn_combo_scaffold_2303_21
'Deinococcus soli' Cha et al. 2014, Deinococcus, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

17911..18489
DNA (579bp) protein (193aa)
Glyoxalase family protein n=1 Tax=Oceanicola batsensis HTCC2597 RepID=A3TWT3_9RHOB
Glyoxalase {ECO:0000313|EMBL:AKH17880.1}; TaxID=1309411 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Deinococcaceae; Deinococcus.;" source="'Deinococcus soli' Cha et al. 2014.;"
hypothetical protein
cn_combo_scaffold_2303_22
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(18568..19146)
DNA (579bp) protein (193aa)
hypothetical protein n=1 Tax=Vibrio parahaemolyticus RepID=UPI00034BEA06
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
hypothetical protein
cn_combo_scaffold_2303_23
Alkalilimnicola ehrlichii, Alkalilimnicola, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19287..19862)
DNA (576bp) protein (192aa)
Transcriptional regulator, TetR family n=1 Tax=Alkalilimnicola ehrlichii (strain ATCC BAA-1101 / DSM 17681 / MLHE-1) RepID=Q0AC74_ALKEH
TetR family transcriptional regulator
Transcriptional regulator, TetR family {ECO:0000313|EMBL:ABI55563.1}; TaxID=187272 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Alkalilimnicola.;" sour
cn_combo_scaffold_2303_24
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

20082..21983
DNA (1902bp) protein (634aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7I3_GEMAT
putative protein kinase
Uncharacterized protein {ECO:0000313|EMBL:BAH38193.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-
cn_combo_scaffold_2303_25
GWA2_Bacteroidetes_40_15_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21997..23232
DNA (1236bp) protein (412aa)
3-oxoacyl-ACP synthase; K09458 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] Tax=GWA2_Bacteroidetes_40_15_curated
3-oxoacyl-ACP synthase (EC:2.3.1.179)
3-oxoacyl-[acyl-carrier-protein] synthase 2 id=4567733 bin=GWC2_Bacteroidetes_40_22 species=Desulfotomaculum acetoxidans genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Bacteroidetes_40_22 organism_group=Bacteroidetes
cn_combo_scaffold_2303_26
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

23381..25618
DNA (2238bp) protein (746aa)
peptidase S9B dipeptidylpeptidase IV domain-containing protein; K01278 dipeptidyl-peptidase 4 [EC:3.4.14.5] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
dipeptidyl-peptidase IV; K01278 dipeptidyl-peptidase 4 [EC:3.4.14.5] id=24399706 bin=RBG_19FT_COMBO_Aminicenantes_65_30 species=Fulvivirga imtechensis genus=Fulvivirga taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=RBG_19FT_COMBO_Aminicenantes_65_30 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
peptidase S9B dipeptidylpeptidase IV domain-containing protein
cn_combo_scaffold_2303_27
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

Not on your lists

25723..27942
DNA (2220bp) protein (740aa)
Serine/threonine protein kinase n=1 Tax=candidate division ZIXI bacterium RBG-1 RepID=T0LFQ2_9BACT
serine/threonine protein kinase Tax=RBG_13_Acidobacteria_68_16_curated
protein kinase
cn_combo_scaffold_2303_28
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

28081..28755
DNA (675bp) protein (225aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00036A281C
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
hypothetical protein
cn_combo_scaffold_2303_29

Not on your lists

28765..29211
DNA (447bp) protein (149aa)
Nudix family protein, MutT subfamily n=1 Tax=uncultured marine bacterium Ant4D5 RepID=Q2PXZ7_9BACT
Nudix family protein, MutT subfamily {ECO:0000313|EMBL:ABC25430.1}; TaxID=360428 species="Bacteria; environmental samples.;" source="uncultured marine bacterium Ant4D5.;"
pyrimidine (deoxy)nucleoside triphosphate pyrophosphohydrolase
cn_combo_scaffold_2303_30
RBG_16_Actinobacteria_68_21_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

29375..30598
DNA (1224bp) protein (408aa)
Predicted aconitase subunit 1 n=1 Tax=Burkholderia sp. RPE64 RepID=R4X314_9BURK
hypothetical protein; K09123 hypothetical protein Tax=RBG_16_Actinobacteria_68_21_curated
predicted aconitase subunit 1
Displaying items 1-30 of 31 in total

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