ggKbase home page

cn_combo_scaffold_233_69

Organism: CN-SCN_Gemmatimonadetes_22x

near complete RP 53 / 55 MC: 1 BSCG 50 / 51 ASCG 14 / 38
Location: comp(86204..86803)

Top 3 Functional Annotations

Value Algorithm Source
SCO1/SenC family protein; K07152 id=12557585 bin=CNBR_ACIDO species=Burkholderia gladioli genus=Burkholderia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? similarity UNIREF
DB: UNIREF100
  • Identity: 54.6
  • Coverage: 163.0
  • Bit_score: 174
  • Evalue 9.80e-41
electron transport protein SCO1/SenC similarity KEGG
DB: KEGG
  • Identity: 39.7
  • Coverage: 189.0
  • Bit_score: 147
  • Evalue 4.70e-33
Electron transport protein SCO1/SenC {ECO:0000313|EMBL:ABU59039.1}; Flags: Precursor;; TaxID=383372 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseif similarity UNIPROT
DB: UniProtKB
  • Identity: 39.7
  • Coverage: 189.0
  • Bit_score: 147
  • Evalue 2.40e-32

Lists

This feature is not on any list.

Notes

possibly a cytochrome assembly protein that binds copper Rose Kantor (11/4/14)

Taxonomy

Roseiflexus castenholzii → Roseiflexus → Chloroflexales → Chloroflexia → Chloroflexi → Bacteria

Sequences

DNA sequence
Length: 600
ATGACGCCGACCGCACGCCGAACGGCGGCCGCGCTCGCATTCGCGTTCGCCGTCGCCGCACTCGGACTGGCGCGCTGGAAGACGTCACGCGACCACCCCCCCGTGACGTCCATCGGCGGCGACTTCGTCCTGACCGATCACACCGGTGCGCCGTTCTCCCTCGCGTCGCAGCGAGGGAAGGTGGTCCTGGTCTTCTTCGGCTATACCTACTGCCCCGACGTCTGCCCCACGACCCTCTCCAAGCTCGCCTCGGTCACGCGCCGGCTCGGGGACGACAGGGCCCGGGTGACGACGCTGTACATCACCGTCGACCCCGAGCGTGACACCCCAGAGGTGCTCGCGGCCGATCTCGAGAGCTTCGACCTCGACGCGTTCGGCCTCACCGGGACGCGCGAGGAGATCGATCGGGTCGTCGCGCTCTATGGCGCATCGTACGAGTTCGTTCCCCGGCCCGAGTCGGCGATCAAGTACACGGTCAATCACACCACCACGCTCTACGCGCTCGATGCGCGGGGGCGCGTGCGCATCCAGTTTCCGTACGAGGCGACGGTGGACCAGGTGGCAACGGGAATCGAGACGCTCCTGGCGGAGTCGCCCTGA
PROTEIN sequence
Length: 200
MTPTARRTAAALAFAFAVAALGLARWKTSRDHPPVTSIGGDFVLTDHTGAPFSLASQRGKVVLVFFGYTYCPDVCPTTLSKLASVTRRLGDDRARVTTLYITVDPERDTPEVLAADLESFDLDAFGLTGTREEIDRVVALYGASYEFVPRPESAIKYTVNHTTTLYALDARGRVRIQFPYEATVDQVATGIETLLAESP*