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cn_combo_scaffold_422_7

Organism: CN-SCN_Gemmatimonadetes_22x

near complete RP 53 / 55 MC: 1 BSCG 50 / 51 ASCG 14 / 38
Location: 9396..9920

Top 3 Functional Annotations

Value Algorithm Source
Sigma factor, ECF-like family protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6L8_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 62.4
  • Coverage: 173.0
  • Bit_score: 204
  • Evalue 1.00e-49
RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 67.3
  • Coverage: 171.0
  • Bit_score: 222
  • Evalue 7.70e-56
RNA polymerase sigma factor {ECO:0000313|EMBL:AHG88012.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 67.3
  • Coverage: 171.0
  • Bit_score: 222
  • Evalue 3.80e-55

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Taxonomy

Gemmatimonadetes bacterium KBS708 → Gemmatimonadetes → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 525
ATGTCGCAGAGCGACCGTCGTGCCCTCGACGCCGTCTTCAGCGACGCCTATCAGGAACTGCGACGCCTGGCGTCGTCGGTACGGGCCAGCGATCCCAACGCGACGCTGACCCCCACCACACTGGTCAACGAGGCCTGGCTCAAGCTCGCTCGCACCCCGCACGTGGCGAGGACGACTCGCCTTCACTTCAAGCGCATCGCGGCGCGGGCCATGCGGCAGGTCCTCGTCGAGGCCGCGCGGCGCCGGCAGGCGGAGAAGCGCGGAGGTGGAGCGGCATTCGTGACCTTCGACGAATCGCTGGGAGAGGAGGAGACCGCGGTCGATGATCTCCTCGCCCTCGACGAGGCGCTGGGCGAGCTCGCGCGCCTGAGCCCCCGGCAGGGAATGCTGGTCGAGGCCCGGTTCTTCGGCGGGCTGGACTTGCGCGAGACGGCCGAGCTCCTGAGTGTCTCGGAGGCGACCATCGTGCGCGACTGGCGCGCCGCGCGCGCCTGGCTGGCGACGGAGCTGCGCCGATCCCGTTAG
PROTEIN sequence
Length: 175
MSQSDRRALDAVFSDAYQELRRLASSVRASDPNATLTPTTLVNEAWLKLARTPHVARTTRLHFKRIAARAMRQVLVEAARRRQAEKRGGGAAFVTFDESLGEEETAVDDLLALDEALGELARLSPRQGMLVEARFFGGLDLRETAELLSVSEATIVRDWRAARAWLATELRRSR*