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cn_combo_scaffold_652_15

Organism: CN-SCN_Gemmatimonadetes_22x

near complete RP 53 / 55 MC: 1 BSCG 50 / 51 ASCG 14 / 38
Location: 16955..17569

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma-70 factor, ECF subfamily n=1 Tax=Algoriphagus machipongonensis RepID=A3HXR4_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 39.2
  • Coverage: 176.0
  • Bit_score: 143
  • Evalue 1.90e-31
RNA polymerase ECF-type sigma factor similarity KEGG
DB: KEGG
  • Identity: 43.3
  • Coverage: 180.0
  • Bit_score: 143
  • Evalue 7.00e-32
RNA polymerase, sigma-24 subunit, ECF subfamily Tax=GWD2_Bacteroidetes_33_33_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 39.7
  • Coverage: 179.0
  • Bit_score: 143
  • Evalue 2.70e-31

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Taxonomy

GWD2_Bacteroidetes_33_33_curated → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 615
ATGACCGCACCCGCCGACGACGAAGATCGCGACTCGCTGCCGGAGGAAGTGGCGTCATCCCCCGCGCCGCCGGGCGACGCGGAGCTGGTGCGGCGAATCCGCGCGGGCGACGAGCGGGCCCTGGAACAGCTGTTCCGCAGCTACTACAGCGGGATGTGCACCTTCGTCCGGCGCTACGTGCACGCGCCGGACATCGCCGAGGAGCTGGTGCAGGACGTCTTCTTCAAGCTGTGGTCCAAGCGGGAGACGCTCTCGGAGATCGATGCGCTGCGGACGTACCTCTTCCGTGCCGCGCGAAACACGGCGCTCAACCACTTGCGGCGCAAGAAGTTGGAGAACGCATGGGAGGAGCAGGAAGCCGCCCGCGGCGAGCCGATGACCACCTCGGCCACCGACGACGACGCGTCCACCGGTGAGGTGGCGCGGGCGGTGAACGAGGCCGTGGCGCGGCTCCCCATGCGCTGCCGCGAGATCTTCCTCATGAGCCGGCAGGGGGGGCTGACGTACGTCGAGATCGCCACCCGGCTCGGAATCAGCGTCAAGACCGTCGAGACCCAGATGGGGCGGGCGCTCAAGTCGCTCCGCCTGTCGCTGGCGAGCTTCCGTGGGGGGTAG
PROTEIN sequence
Length: 205
MTAPADDEDRDSLPEEVASSPAPPGDAELVRRIRAGDERALEQLFRSYYSGMCTFVRRYVHAPDIAEELVQDVFFKLWSKRETLSEIDALRTYLFRAARNTALNHLRRKKLENAWEEQEAARGEPMTTSATDDDASTGEVARAVNEAVARLPMRCREIFLMSRQGGLTYVEIATRLGISVKTVETQMGRALKSLRLSLASFRGG*